RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 GPRC5BQ9NZH0 403 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 RRP7AQ9Y3A4 280 aaKnown RBP4.64□□□□□ -1.67
HERC4-204ENST00000395198 CHTOPQ9Y3Y2 248 aaKnown RBP4.64□□□□□ -1.67
HERC4-204ENST00000395198 MAP3K19Q56UN5 1328 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 NINLQ9Y2I6 1382 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 M0R2N6 131 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 MAPK13O15264 365 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 TEX28O15482 410 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 PALMO75781 387 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 KCNH1O95259 989 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 PGM3O95394 542 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 CYP3A4P08684 503 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 PDHBP11177 359 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 ZNF267Q14586 743 aaPredicted RBP4.64□□□□□ -1.67
HERC4-204ENST00000395198 WDR43Q15061 677 aaKnown RBP eCLIP4.64□□□□□ -1.67
HERC4-204ENST00000395198 PCBP1Q15365 356 aaKnown RBP eCLIP4.64□□□□□ -1.67
HERC4-204ENST00000395198 FAM114A1Q8IWE2 563 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 CPA6Q8N4T0 437 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 ZNF565Q8N9K5 539 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 AGBL5Q8NDL9 886 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 DMRTB1Q96MA1 342 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 NTMT1Q9BV86 223 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 PDE7BQ9NP56 450 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 STK32BQ9NY57 414 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 POLHQ9Y253 713 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 SNX8Q9Y5X2 465 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 ANKRD30AQ9BXX3 1397 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 CCDC18Q5T9S5 1454 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 TTC34A8MYJ7 566 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 SGK1O00141 431 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 ARHGAP33O14559 1287 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 LSM1O15116 133 aaKnown RBP4.63□□□□□ -1.67
HERC4-204ENST00000395198 ADCY3O60266 1144 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 DIAPH2O60879 1101 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 ACTN1P12814 892 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 ABCB4P21439 1286 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 DSG3P32926 999 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 MTIF2P46199 727 aaKnown RBP4.63□□□□□ -1.67
HERC4-204ENST00000395198 EIF1AXP47813 144 aaKnown RBP4.63□□□□□ -1.67
HERC4-204ENST00000395198 TUFMP49411 452 aaKnown RBP4.63□□□□□ -1.67
HERC4-204ENST00000395198 SCNN1GP51170 649 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 IGSF11Q5DX21 431 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 TMEM154Q6P9G4 183 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 DENND5BQ6ZUT9 1274 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 ILDR1Q86SU0 546 aaPredicted RBP4.63□□□□□ -1.67
HERC4-204ENST00000395198 CD302Q8IX05 232 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 ZSCAN1Q8NBB4 408 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 AVL9Q8NBF6 648 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 SLC4A11Q8NBS3 891 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 SLC2A13Q96QE2 648 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 MXD3Q9BW11 206 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 SUCOQ9UBS9 1254 aaKnown RBP4.63□□□□□ -1.67
HERC4-204ENST00000395198 KDRP35968 1356 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 ADAMTS12P58397 1594 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 PRR5-ARHGAP8B1AHC4 643 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 EIF3CLB5ME19 914 aaKnown RBP4.63□□□□□ -1.67
HERC4-204ENST00000395198 ASGR1P07306 291 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 CDH3P22223 829 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 TAGLN2P37802 199 aaKnown RBP4.63□□□□□ -1.67
HERC4-204ENST00000395198 EPS15P42566 896 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 CDR1P51861 262 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 SLC12A3P55017 1021 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 DRG2P55039 364 aaKnown RBP4.63□□□□□ -1.67
HERC4-204ENST00000395198 CNGA2Q16280 664 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 MAPKAPK3Q16644 382 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 CNNM4Q6P4Q7 775 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 LMBR1LQ6UX01 489 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 ISLR2Q6UXK2 745 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 ILDR2Q71H61 639 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 COL23A1Q86Y22 540 aaPredicted RBP4.63□□□□□ -1.67
HERC4-204ENST00000395198 WDR49Q8IV35 697 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 ARMC2Q8NEN0 867 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 CEP70Q8NHQ1 597 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 LEO1Q8WVC0 666 aaPredicted RBP4.63□□□□□ -1.67
HERC4-204ENST00000395198 UCMAQ8WVF2 138 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 RUNDC3BQ96NL0 473 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 FERD3LQ96RJ6 166 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 EIF3CQ99613 913 aaKnown RBP4.63□□□□□ -1.67
HERC4-204ENST00000395198 TUBA1CQ9BQE3 449 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 DNAAF2Q9NVR5 837 aaKnown RBP4.63□□□□□ -1.67
HERC4-204ENST00000395198 GRHPRQ9UBQ7 328 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 CHORDC1Q9UHD1 332 aaPredicted RBP4.63□□□□□ -1.67
HERC4-204ENST00000395198 ZNF335Q9H4Z2 1342 aaPredicted RBP4.63□□□□□ -1.67
HERC4-204ENST00000395198 ARHGAP35Q9NRY4 1499 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 RUSC2Q8N2Y8 1516 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 VPS8Q8N3P4 1428 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 A6NLC8 198 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 GREM1O60565 184 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 FMO6PO60774 539 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 EEF2P13639 858 aaKnown RBP4.63□□□□□ -1.67
HERC4-204ENST00000395198 KELP23276 732 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 TARSP26639 723 aaKnown RBP4.63□□□□□ -1.67
HERC4-204ENST00000395198 IFNAR2P48551 515 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 MBTPS1Q14703 1052 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 ZNF674Q2M3X9 581 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 FUT11Q495W5 492 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 OGFOD3Q6PK18 319 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 LRSAM1Q6UWE0 723 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 NANOGNBQ7Z5D8 188 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 SLC15A3Q8IY34 581 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms