RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 NAB2Q15742 525 aa15.25■□□□□ 0.03
SNCA-204ENST00000394989 CBWD6Q4V339 395 aa15.25■□□□□ 0.03
SNCA-204ENST00000394989 CBWD3Q5JTY5 395 aa15.25■□□□□ 0.03
SNCA-204ENST00000394989 CBWD5Q5RIA9 395 aa15.25■□□□□ 0.03
SNCA-204ENST00000394989 RNF207Q6ZRF8 634 aa15.25■□□□□ 0.03
SNCA-204ENST00000394989 SCYL3Q8IZE3 742 aa15.25■□□□□ 0.03
SNCA-204ENST00000394989 ALS2CR12Q96Q35 445 aa15.25■□□□□ 0.03
SNCA-204ENST00000394989 SPAG5Q96R06 1193 aa15.25■□□□□ 0.03
SNCA-204ENST00000394989 MKNK1Q9BUB5 465 aa15.25■□□□□ 0.03
SNCA-204ENST00000394989 TISP43B9A030 160 aa15.25■□□□□ 0.03
SNCA-204ENST00000394989 CCNE2O96020 404 aa15.25■□□□□ 0.03
SNCA-204ENST00000394989 MYCLP12524 364 aaPredicted RBP15.25■□□□□ 0.03
SNCA-204ENST00000394989 PTPRAP18433 802 aa15.25■□□□□ 0.03
SNCA-204ENST00000394989 QARSP47897 775 aaKnown RBP15.25■□□□□ 0.03
SNCA-204ENST00000394989 CYP2J2P51589 502 aa15.25■□□□□ 0.03
SNCA-204ENST00000394989 CKAP4Q07065 602 aaKnown RBP15.25■□□□□ 0.03
SNCA-204ENST00000394989 GPS2Q13227 327 aa15.25■□□□□ 0.03
SNCA-204ENST00000394989 PLS1Q14651 629 aa15.25■□□□□ 0.03
SNCA-204ENST00000394989 REPS2Q8NFH8 660 aa15.25■□□□□ 0.03
SNCA-204ENST00000394989 RPGRIP1Q96KN7 1286 aa15.25■□□□□ 0.03
SNCA-204ENST00000394989 NOX5Q96PH1 765 aa15.25■□□□□ 0.03
SNCA-204ENST00000394989 DBR1Q9UK59 544 aaKnown RBP15.25■□□□□ 0.03
SNCA-204ENST00000394989 C2orf54Q08AI8 447 aa15.24■□□□□ 0.03
SNCA-204ENST00000394989 IQCEQ6IPM2 695 aa15.24■□□□□ 0.03
SNCA-204ENST00000394989 NSMFQ6X4W1 530 aa15.24■□□□□ 0.03
SNCA-204ENST00000394989 DNAAF5Q86Y56 855 aa15.24■□□□□ 0.03
SNCA-204ENST00000394989 WRNIP1Q96S55 665 aa15.24■□□□□ 0.03
SNCA-204ENST00000394989 SGIP1Q9BQI5 828 aa15.24■□□□□ 0.03
SNCA-204ENST00000394989 ZBED4O75132 1171 aa15.24■□□□□ 0.03
SNCA-204ENST00000394989 YWHABP31946 246 aaKnown RBP15.24■□□□□ 0.03
SNCA-204ENST00000394989 PRKCIP41743 596 aa15.24■□□□□ 0.03
SNCA-204ENST00000394989 KIAA0753Q2KHM9 967 aa15.24■□□□□ 0.03
SNCA-204ENST00000394989 ANGEL2Q5VTE6 544 aaKnown RBP15.24■□□□□ 0.03
SNCA-204ENST00000394989 HS2ST1Q7LGA3 356 aa15.24■□□□□ 0.03
SNCA-204ENST00000394989 ZNF572Q7Z3I7 529 aaPredicted RBP15.24■□□□□ 0.03
SNCA-204ENST00000394989 TBC1D22BQ9NU19 505 aa15.24■□□□□ 0.03
SNCA-204ENST00000394989 SMARCAL1Q9NZC9 954 aa15.24■□□□□ 0.03
SNCA-204ENST00000394989 EHD2Q9NZN4 543 aa15.24■□□□□ 0.03
SNCA-204ENST00000394989 K7ENM7 598 aa15.24■□□□□ 0.03
SNCA-204ENST00000394989 LYPLA2O95372 231 aa15.24■□□□□ 0.03
SNCA-204ENST00000394989 TRIM49P0CI25 452 aa15.24■□□□□ 0.03
SNCA-204ENST00000394989 TRIM49CP0CI26 452 aa15.24■□□□□ 0.03
SNCA-204ENST00000394989 FMO5P49326 533 aa15.24■□□□□ 0.03
SNCA-204ENST00000394989 SAMD3Q8N6K7 520 aa15.24■□□□□ 0.03
SNCA-204ENST00000394989 ZNF280CQ8ND82 737 aa15.24■□□□□ 0.03
SNCA-204ENST00000394989 CAGE1Q8TC20 777 aa15.24■□□□□ 0.03
SNCA-204ENST00000394989 VPS18Q9P253 973 aa15.24■□□□□ 0.03
SNCA-204ENST00000394989 BAATQ14032 418 aaPredicted RBP15.23■□□□□ 0.03
SNCA-204ENST00000394989 FOXR1Q6PIV2 292 aa15.23■□□□□ 0.03
SNCA-204ENST00000394989 STXBP4Q6ZWJ1 553 aa15.23■□□□□ 0.03
SNCA-204ENST00000394989 TXLNBQ8N3L3 684 aa15.23■□□□□ 0.03
SNCA-204ENST00000394989 OLIG1Q8TAK6 271 aa15.23■□□□□ 0.03
SNCA-204ENST00000394989 RNF146Q9NTX7 359 aa15.23■□□□□ 0.03
SNCA-204ENST00000394989 NENFQ9UMX5 172 aa15.23■□□□□ 0.03
SNCA-204ENST00000394989 PALMO75781 387 aa15.23■□□□□ 0.03
SNCA-204ENST00000394989 HMGCS2P54868 508 aa15.23■□□□□ 0.03
SNCA-204ENST00000394989 TRMT1LQ7Z2T5 733 aaKnown RBP15.23■□□□□ 0.03
SNCA-204ENST00000394989 SLC9A9Q8IVB4 645 aa15.23■□□□□ 0.03
SNCA-204ENST00000394989 TRPM4Q8TD43 1214 aa15.23■□□□□ 0.03
SNCA-204ENST00000394989 ZNF214Q9UL59 606 aaPredicted RBP15.23■□□□□ 0.03
SNCA-204ENST00000394989 HYOU1Q9Y4L1 999 aa15.23■□□□□ 0.03
SNCA-204ENST00000394989 PCDHGC5Q9Y5F6 944 aa15.23■□□□□ 0.03
SNCA-204ENST00000394989 SSC5DA1L4H1 1573 aa15.22■□□□□ 0.03
SNCA-204ENST00000394989 TESPA1A2RU30 521 aaPredicted RBP15.22■□□□□ 0.03
SNCA-204ENST00000394989 BACH1O14867 736 aa15.22■□□□□ 0.03
SNCA-204ENST00000394989 ARHGEF16Q5VV41 709 aa15.22■□□□□ 0.03
SNCA-204ENST00000394989 DCAF15Q66K64 600 aa15.22■□□□□ 0.03
SNCA-204ENST00000394989 GPRC5CQ9NQ84 441 aa15.22■□□□□ 0.03
SNCA-204ENST00000394989 NAGPAQ9UK23 515 aa15.22■□□□□ 0.03
SNCA-204ENST00000394989 ADAM21Q9UKJ8 722 aa15.22■□□□□ 0.03
SNCA-204ENST00000394989 FRMD4BQ9Y2L6 1034 aa15.22■□□□□ 0.03
SNCA-204ENST00000394989 NAP1L1P55209 391 aaKnown RBP15.22■□□□□ 0.03
SNCA-204ENST00000394989 RDH13Q8NBN7 331 aa15.22■□□□□ 0.03
SNCA-204ENST00000394989 ZSWIM2Q8NEG5 633 aa15.22■□□□□ 0.03
SNCA-204ENST00000394989 GPR88Q9GZN0 384 aa15.22■□□□□ 0.03
SNCA-204ENST00000394989 LARSQ9P2J5 1176 aaKnown RBP15.22■□□□□ 0.03
SNCA-204ENST00000394989 ADAMTS5Q9UNA0 930 aa15.22■□□□□ 0.03
SNCA-204ENST00000394989 BZW2Q9Y6E2 419 aaKnown RBP15.22■□□□□ 0.03
SNCA-204ENST00000394989 WDR81Q562E7 1941 aa15.22■□□□□ 0.03
SNCA-204ENST00000394989 PPP1R12BO60237 982 aaPredicted RBP15.22■□□□□ 0.03
SNCA-204ENST00000394989 ERLIN1O75477 346 aa15.22■□□□□ 0.03
SNCA-204ENST00000394989 ZMYND10O75800 440 aa15.22■□□□□ 0.03
SNCA-204ENST00000394989 PLS3P13797 630 aa15.22■□□□□ 0.03
SNCA-204ENST00000394989 TCP1P17987 556 aaKnown RBP15.22■□□□□ 0.03
SNCA-204ENST00000394989 DLG4P78352 724 aa15.22■□□□□ 0.03
SNCA-204ENST00000394989 PLA2G4FQ68DD2 849 aa15.22■□□□□ 0.03
SNCA-204ENST00000394989 C4orf19Q8IY42 314 aa15.22■□□□□ 0.03
SNCA-204ENST00000394989 SYCP3Q8IZU3 236 aa15.22■□□□□ 0.03
SNCA-204ENST00000394989 SPATA4Q8NEY3 305 aa15.22■□□□□ 0.03
SNCA-204ENST00000394989 CTDP1Q9Y5B0 961 aaPredicted RBP15.22■□□□□ 0.03
SNCA-204ENST00000394989 TARSL2A2RTX5 802 aaKnown RBP15.21■□□□□ 0.03
SNCA-204ENST00000394989 RGS20O76081 388 aa15.21■□□□□ 0.03
SNCA-204ENST00000394989 TUBBP07437 444 aa15.21■□□□□ 0.03
SNCA-204ENST00000394989 BFSP1Q12934 665 aa15.21■□□□□ 0.03
SNCA-204ENST00000394989 PPP2R5AQ15172 486 aa15.21■□□□□ 0.03
SNCA-204ENST00000394989 SNRNP48Q6IEG0 339 aaKnown RBP15.21■□□□□ 0.03
SNCA-204ENST00000394989 VSIG10LQ86VR7 867 aa15.21■□□□□ 0.03
SNCA-204ENST00000394989 LUC7LQ9NQ29 371 aaKnown RBP15.21■□□□□ 0.03
SNCA-204ENST00000394989 TELO2Q9Y4R8 837 aa15.21■□□□□ 0.03
SNCA-204ENST00000394989 KIAA1217Q5T5P2 1943 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms