RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 PSMC5P62195 406 aa17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 MRPS9P82933 396 aaKnown RBP17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 VGLL4Q14135 290 aa17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 GJC2Q5T442 439 aaPredicted RBP17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 CBWD2Q8IUF1 395 aa17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 ZBTB10Q96DT7 871 aa17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 ABCB6Q9NP58 842 aa17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 CASZ1Q86V15 1759 aa17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 ATMINO43313 823 aaPredicted RBP17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 SPOPO43791 374 aa17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 PSMD10O75832 226 aa17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 SERPING1P05155 500 aa17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 IREB2P48200 963 aaKnown RBP17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 ZNF211Q13398 564 aaPredicted RBP17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 SCARA5Q6ZMJ2 495 aa17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 ZSWIM2Q8NEG5 633 aa17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 KRT12Q99456 494 aa17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 TSGA10Q9BZW7 698 aa17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 FAM107BQ9H098 131 aa17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 TBC1D22BQ9NU19 505 aa17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 ITIH6Q6UXX5 1313 aa17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 MAP3K9P80192 1104 aa17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 MAATS1Q7Z4T9 603 aa17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 GPR161Q8N6U8 529 aaKnown RBP17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 CEP63Q96MT8 703 aa17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 KIAA1683Q9H0B3 1180 aa17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 A1CFQ9NQ94 594 aaKnown RBP17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 AGPAT3Q9NRZ7 376 aa17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 CEP72Q9P209 647 aa17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 SLC9A2Q9UBY0 812 aa17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 FAM184BQ9ULE4 1060 aa17.29■□□□□ 0.36
SMARCD1-202ENST00000394963 K7ERI5 159 aa17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 FANCGO15287 622 aa17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 CYP2C8P10632 490 aa17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 DLG4P78352 724 aa17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 TMEM132BQ14DG7 1078 aa17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 TREML2Q5T2D2 321 aa17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 UHMK1Q8TAS1 419 aaKnown RBP17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 SLC38A10Q9HBR0 1119 aa17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 PDE11AQ9HCR9 933 aa17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 PXMP2Q9NR77 195 aa17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 VAV3Q9UKW4 847 aa17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 EIF3JO75822 258 aaKnown RBP17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 VPS41P49754 854 aa17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 KCNMA1Q12791 1236 aa17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 LONRF2Q1L5Z9 754 aa17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 CCDC170Q8IYT3 715 aa17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 XXYLT1Q8NBI6 393 aa17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 CCDC113Q9H0I3 377 aa17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 TUFT1Q9NNX1 390 aa17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 GPRC5DQ9NZD1 345 aa17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 PDXKO00764 312 aa17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 GGPS1O95749 300 aa17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 PSAPP07602 524 aa17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 CD19P15391 556 aa17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 PRKCEQ02156 737 aa17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 TAB3Q8N5C8 712 aaPredicted RBP17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 ERGIC2Q96RQ1 377 aa17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 DPH5Q9H2P9 285 aa17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 OGFRQ9NZT2 677 aa17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 PLAGL2Q9UPG8 496 aa17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 REXO2Q9Y3B8 237 aaKnown RBP17.28■□□□□ 0.36
SMARCD1-202ENST00000394963 BCRP11274 1271 aa17.27■□□□□ 0.36
SMARCD1-202ENST00000394963 PBX1P40424 430 aa17.27■□□□□ 0.36
SMARCD1-202ENST00000394963 RARRES1P49788 294 aa17.27■□□□□ 0.36
SMARCD1-202ENST00000394963 CCDC50Q8IVM0 306 aa17.27■□□□□ 0.36
SMARCD1-202ENST00000394963 MTMR8Q96EF0 704 aa17.27■□□□□ 0.36
SMARCD1-202ENST00000394963 POLR3FQ9H1D9 316 aaPredicted RBP17.27■□□□□ 0.36
SMARCD1-202ENST00000394963 IGLV3-22A0A075B6J6 115 aa17.27■□□□□ 0.36
SMARCD1-202ENST00000394963 CTIFO43310 598 aaKnown RBP17.27■□□□□ 0.36
SMARCD1-202ENST00000394963 MYCP01106 439 aaPredicted RBP17.27■□□□□ 0.36
SMARCD1-202ENST00000394963 OAS2P29728 719 aaKnown RBP17.27■□□□□ 0.36
SMARCD1-202ENST00000394963 VSNL1P62760 191 aa17.27■□□□□ 0.36
SMARCD1-202ENST00000394963 LY6KQ17RY6 165 aa17.27■□□□□ 0.36
SMARCD1-202ENST00000394963 DPP9Q86TI2 863 aa17.27■□□□□ 0.36
SMARCD1-202ENST00000394963 CCDC25Q86WR0 208 aa17.27■□□□□ 0.36
SMARCD1-202ENST00000394963 HSD17B14Q9BPX1 270 aa17.27■□□□□ 0.36
SMARCD1-202ENST00000394963 APOL6Q9BWW8 343 aa17.27■□□□□ 0.36
SMARCD1-202ENST00000394963 VAMP7P51809 220 aa17.27■□□□□ 0.35
SMARCD1-202ENST00000394963 TFAMQ00059 246 aaKnown RBP17.27■□□□□ 0.35
SMARCD1-202ENST00000394963 ZNF720Q7Z2F6 126 aa17.27■□□□□ 0.35
SMARCD1-202ENST00000394963 SLC30A5Q8TAD4 765 aa17.27■□□□□ 0.35
SMARCD1-202ENST00000394963 POLR3CQ9BUI4 534 aaPredicted RBP17.27■□□□□ 0.35
SMARCD1-202ENST00000394963 ACBD3Q9H3P7 528 aa17.27■□□□□ 0.35
SMARCD1-202ENST00000394963 AGO4Q9HCK5 861 aaKnown RBP17.27■□□□□ 0.35
SMARCD1-202ENST00000394963 RNF19AQ9NV58 838 aa17.27■□□□□ 0.35
SMARCD1-202ENST00000394963 HSPBP1Q9NZL4 362 aa17.27■□□□□ 0.35
SMARCD1-202ENST00000394963 NXF1Q9UBU9 619 aaKnown RBP17.27■□□□□ 0.35
SMARCD1-202ENST00000394963 EXOC7Q9UPT5 735 aa17.27■□□□□ 0.35
SMARCD1-202ENST00000394963 CD2APQ9Y5K6 639 aa17.27■□□□□ 0.35
SMARCD1-202ENST00000394963 PLIN4Q96Q06 1357 aa17.27■□□□□ 0.35
SMARCD1-202ENST00000394963 RPS12P25398 132 aaKnown RBP17.26■□□□□ 0.35
SMARCD1-202ENST00000394963 GUCY2DQ02846 1103 aa17.26■□□□□ 0.35
SMARCD1-202ENST00000394963 TMEM62Q0P6H9 643 aa17.26■□□□□ 0.35
SMARCD1-202ENST00000394963 WDR44Q5JSH3 913 aa17.26■□□□□ 0.35
SMARCD1-202ENST00000394963 TTC19Q6DKK2 380 aaPredicted RBP17.26■□□□□ 0.35
SMARCD1-202ENST00000394963 TRAPPC12Q8WVT3 735 aa17.26■□□□□ 0.35
SMARCD1-202ENST00000394963 KAT5Q92993 513 aa17.26■□□□□ 0.35
SMARCD1-202ENST00000394963 EIF3CLB5ME19 914 aaKnown RBP17.26■□□□□ 0.35
SMARCD1-202ENST00000394963 PON1P27169 355 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms