RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 LTBRP36941 435 aa9.97□□□□□ -0.81
ATG4A-205ENST00000394892 SARSP49591 514 aaKnown RBP9.97□□□□□ -0.81
ATG4A-205ENST00000394892 BTG3Q14201 252 aaPredicted RBP9.97□□□□□ -0.81
ATG4A-205ENST00000394892 MTERF2Q49AM1 385 aa9.97□□□□□ -0.81
ATG4A-205ENST00000394892 XKR3Q5GH77 459 aa9.97□□□□□ -0.81
ATG4A-205ENST00000394892 PLA2G4FQ68DD2 849 aa9.97□□□□□ -0.81
ATG4A-205ENST00000394892 LRRC55Q6ZSA7 311 aa9.97□□□□□ -0.81
ATG4A-205ENST00000394892 KSR1Q8IVT5 923 aa9.97□□□□□ -0.81
ATG4A-205ENST00000394892 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.97□□□□□ -0.81
ATG4A-205ENST00000394892 SPPL3Q8TCT6 385 aa9.97□□□□□ -0.81
ATG4A-205ENST00000394892 FAM167AQ96KS9 214 aa9.97□□□□□ -0.81
ATG4A-205ENST00000394892 FTHL17Q9BXU8 183 aa9.97□□□□□ -0.81
ATG4A-205ENST00000394892 ALG13Q9NP73 1137 aaKnown RBP9.97□□□□□ -0.81
ATG4A-205ENST00000394892 NRBP2Q9NSY0 501 aa9.97□□□□□ -0.81
ATG4A-205ENST00000394892 PLAGL2Q9UPG8 496 aa9.97□□□□□ -0.81
ATG4A-205ENST00000394892 TTC3P53804 2025 aa9.96□□□□□ -0.81
ATG4A-205ENST00000394892 A0A087WWV3 80 aa9.96□□□□□ -0.82
ATG4A-205ENST00000394892 CCDC194A0A1B0GVG4 234 aa9.96□□□□□ -0.82
ATG4A-205ENST00000394892 DDX11L8A8MPP1 907 aa9.96□□□□□ -0.82
ATG4A-205ENST00000394892 M0QZ92 97 aa9.96□□□□□ -0.82
ATG4A-205ENST00000394892 CCNT1O60563 726 aaKnown RBP9.96□□□□□ -0.82
ATG4A-205ENST00000394892 MAFO75444 373 aaPredicted RBP9.96□□□□□ -0.82
ATG4A-205ENST00000394892 MMP1P03956 469 aa9.96□□□□□ -0.82
ATG4A-205ENST00000394892 RB1P06400 928 aa9.96□□□□□ -0.82
ATG4A-205ENST00000394892 IBSPP21815 317 aaPredicted RBP9.96□□□□□ -0.82
ATG4A-205ENST00000394892 EIF4BP23588 611 aaKnown RBP9.96□□□□□ -0.82
ATG4A-205ENST00000394892 DLX2Q07687 328 aaPredicted RBP9.96□□□□□ -0.82
ATG4A-205ENST00000394892 HYAL1Q12794 435 aa9.96□□□□□ -0.82
ATG4A-205ENST00000394892 ANKRD1Q15327 319 aa9.96□□□□□ -0.82
ATG4A-205ENST00000394892 CTC1Q2NKJ3 1217 aa9.96□□□□□ -0.82
ATG4A-205ENST00000394892 SLC24A5Q71RS6 500 aa9.96□□□□□ -0.82
ATG4A-205ENST00000394892 ZNF598Q86UK7 904 aaKnown RBP9.96□□□□□ -0.82
ATG4A-205ENST00000394892 ALYREFQ86V81 257 aaKnown RBP9.96□□□□□ -0.82
ATG4A-205ENST00000394892 CMTR2Q8IYT2 770 aaKnown RBP9.96□□□□□ -0.82
ATG4A-205ENST00000394892 NEK9Q8TD19 979 aa9.96□□□□□ -0.82
ATG4A-205ENST00000394892 FAM20AQ96MK3 541 aa9.96□□□□□ -0.82
ATG4A-205ENST00000394892 KCNH6Q9H252 994 aa9.96□□□□□ -0.82
ATG4A-205ENST00000394892 TMEM60Q9H2L4 133 aa9.96□□□□□ -0.82
ATG4A-205ENST00000394892 CWH43Q9H720 699 aa9.96□□□□□ -0.82
ATG4A-205ENST00000394892 C11orf16Q9NQ32 467 aa9.96□□□□□ -0.82
ATG4A-205ENST00000394892 SEPT9Q9UHD8 586 aaPredicted RBP9.96□□□□□ -0.82
ATG4A-205ENST00000394892 AKT3Q9Y243 479 aa9.96□□□□□ -0.82
ATG4A-205ENST00000394892 BRWD1Q9NSI6 2320 aa9.95□□□□□ -0.82
ATG4A-205ENST00000394892 GRXCR2A6NFK2 248 aa9.95□□□□□ -0.82
ATG4A-205ENST00000394892 H3BQ06 376 aaPredicted RBP9.95□□□□□ -0.82
ATG4A-205ENST00000394892 GPR182O15218 404 aa9.95□□□□□ -0.82
ATG4A-205ENST00000394892 LINC01565O15544 149 aa9.95□□□□□ -0.82
ATG4A-205ENST00000394892 DCXO43602 365 aa9.95□□□□□ -0.82
ATG4A-205ENST00000394892 SLITRK3O94933 977 aa9.95□□□□□ -0.82
ATG4A-205ENST00000394892 CSPG5O95196 566 aa9.95□□□□□ -0.82
ATG4A-205ENST00000394892 IL9P15248 144 aa9.95□□□□□ -0.82
ATG4A-205ENST00000394892 GCFC2P16383 781 aaKnown RBP9.95□□□□□ -0.82
ATG4A-205ENST00000394892 KRT2P35908 639 aa9.95□□□□□ -0.82
ATG4A-205ENST00000394892 PSMC5P62195 406 aa9.95□□□□□ -0.82
ATG4A-205ENST00000394892 GUCY1B3Q02153 619 aa9.95□□□□□ -0.82
ATG4A-205ENST00000394892 TBC1D8BQ0IIM8 1120 aa9.95□□□□□ -0.82
ATG4A-205ENST00000394892 EPHA7Q15375 998 aa9.95□□□□□ -0.82
ATG4A-205ENST00000394892 CLLU1OSQ5K130 101 aa9.95□□□□□ -0.82
ATG4A-205ENST00000394892 ADGRD2Q7Z7M1 963 aa9.95□□□□□ -0.82
ATG4A-205ENST00000394892 CCDC83Q8IWF9 413 aa9.95□□□□□ -0.82
ATG4A-205ENST00000394892 DIS3L2Q8IYB7 885 aaKnown RBP9.95□□□□□ -0.82
ATG4A-205ENST00000394892 KLHL23Q8NBE8 558 aa9.95□□□□□ -0.82
ATG4A-205ENST00000394892 DYDC2Q96IM9 177 aa9.95□□□□□ -0.82
ATG4A-205ENST00000394892 CASD1Q96PB1 797 aa9.95□□□□□ -0.82
ATG4A-205ENST00000394892 MTMR9Q96QG7 549 aa9.95□□□□□ -0.82
ATG4A-205ENST00000394892 MINDY3Q9H8M7 445 aa9.95□□□□□ -0.82
ATG4A-205ENST00000394892 XPNPEP1Q9NQW7 623 aa9.95□□□□□ -0.82
ATG4A-205ENST00000394892 TYW1Q9NV66 732 aaKnown RBP9.95□□□□□ -0.82
ATG4A-205ENST00000394892 PRKAG3Q9UGI9 489 aa9.95□□□□□ -0.82
ATG4A-205ENST00000394892 CEP131Q9UPN4 1083 aa9.95□□□□□ -0.82
ATG4A-205ENST00000394892 MYO7AQ13402 2215 aa9.94□□□□□ -0.82
ATG4A-205ENST00000394892 A0A087WZ62 844 aa9.94□□□□□ -0.82
ATG4A-205ENST00000394892 TBKBP1A7MCY6 615 aa9.94□□□□□ -0.82
ATG4A-205ENST00000394892 MEIS3P2A8K0S8 358 aa9.94□□□□□ -0.82
ATG4A-205ENST00000394892 TBX3O15119 743 aa9.94□□□□□ -0.82
ATG4A-205ENST00000394892 ABCB7O75027 752 aa9.94□□□□□ -0.82
ATG4A-205ENST00000394892 P4HBP07237 508 aaKnown RBP9.94□□□□□ -0.82
ATG4A-205ENST00000394892 STAG3L1P0CL83 205 aa9.94□□□□□ -0.82
ATG4A-205ENST00000394892 QARSP47897 775 aaKnown RBP9.94□□□□□ -0.82
ATG4A-205ENST00000394892 RBM10P98175 930 aaKnown RBP9.94□□□□□ -0.82
ATG4A-205ENST00000394892 CTTNQ14247 550 aaKnown RBP9.94□□□□□ -0.82
ATG4A-205ENST00000394892 ECHDC2Q86YB7 292 aa9.94□□□□□ -0.82
ATG4A-205ENST00000394892 PABPC5Q96DU9 382 aaKnown RBP9.94□□□□□ -0.82
ATG4A-205ENST00000394892 MAP7D2Q96T17 732 aa9.94□□□□□ -0.82
ATG4A-205ENST00000394892 POP1Q99575 1024 aaKnown RBP9.94□□□□□ -0.82
ATG4A-205ENST00000394892 HSD17B14Q9BPX1 270 aa9.94□□□□□ -0.82
ATG4A-205ENST00000394892 FDXACB1Q9BRP7 624 aaPredicted RBP9.94□□□□□ -0.82
ATG4A-205ENST00000394892 LXNQ9BS40 222 aa9.94□□□□□ -0.82
ATG4A-205ENST00000394892 C11orf84Q9BUA3 381 aaPredicted RBP9.94□□□□□ -0.82
ATG4A-205ENST00000394892 PLVAPQ9BX97 442 aa9.94□□□□□ -0.82
ATG4A-205ENST00000394892 NSUN3Q9H649 340 aaKnown RBP9.94□□□□□ -0.82
ATG4A-205ENST00000394892 DHX33Q9H6R0 707 aaKnown RBP9.94□□□□□ -0.82
ATG4A-205ENST00000394892 IFT122Q9HBG6 1241 aa9.94□□□□□ -0.82
ATG4A-205ENST00000394892 CYP26B1Q9NR63 512 aa9.94□□□□□ -0.82
ATG4A-205ENST00000394892 TMEM161AQ9NX61 479 aa9.94□□□□□ -0.82
ATG4A-205ENST00000394892 SUCLA2Q9P2R7 463 aaPredicted RBP9.94□□□□□ -0.82
ATG4A-205ENST00000394892 TCEAL9Q9UHQ7 104 aa9.94□□□□□ -0.82
ATG4A-205ENST00000394892 LIMCH1Q9UPQ0 1083 aa9.94□□□□□ -0.82
ATG4A-205ENST00000394892 RWDD3Q9Y3V2 267 aa9.94□□□□□ -0.82
ATG4A-205ENST00000394892 PCDHB7Q9Y5E2 793 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms