RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 MAP7D2Q96T17 732 aa22.37■■□□□ 1.17
UPK3B-203ENST00000394849 MRPL9Q9BYD2 267 aaKnown RBP22.37■■□□□ 1.17
UPK3B-203ENST00000394849 MFSD1Q9H3U5 465 aa22.37■■□□□ 1.17
UPK3B-203ENST00000394849 RBM28Q9NW13 759 aaKnown RBP22.37■■□□□ 1.17
UPK3B-203ENST00000394849 MAFBQ9Y5Q3 323 aaPredicted RBP22.37■■□□□ 1.17
UPK3B-203ENST00000394849 EOMESO95936 686 aa22.36■■□□□ 1.17
UPK3B-203ENST00000394849 EIF4BP23588 611 aaKnown RBP22.36■■□□□ 1.17
UPK3B-203ENST00000394849 ALDH7A1P49419 539 aaKnown RBP22.36■■□□□ 1.17
UPK3B-203ENST00000394849 ATAT1Q5SQI0 421 aa22.36■■□□□ 1.17
UPK3B-203ENST00000394849 ECHDC2Q86YB7 292 aa22.36■■□□□ 1.17
UPK3B-203ENST00000394849 SMAP1Q8IYB5 467 aaPredicted RBP22.36■■□□□ 1.17
UPK3B-203ENST00000394849 SLC39A11Q8N1S5 342 aa22.36■■□□□ 1.17
UPK3B-203ENST00000394849 TDRD5Q8NAT2 981 aaKnown RBP22.36■■□□□ 1.17
UPK3B-203ENST00000394849 NKD2Q969F2 451 aaPredicted RBP22.36■■□□□ 1.17
UPK3B-203ENST00000394849 TBC1D22BQ9NU19 505 aa22.36■■□□□ 1.17
UPK3B-203ENST00000394849 TCEAL9Q9UHQ7 104 aa22.36■■□□□ 1.17
UPK3B-203ENST00000394849 DDX39AO00148 427 aaKnown RBP22.35■■□□□ 1.17
UPK3B-203ENST00000394849 IPO5O00410 1097 aaKnown RBP22.35■■□□□ 1.17
UPK3B-203ENST00000394849 VTNP04004 478 aa22.35■■□□□ 1.17
UPK3B-203ENST00000394849 KIAA1841Q6NSI8 718 aa22.35■■□□□ 1.17
UPK3B-203ENST00000394849 ZNF746Q6NUN9 644 aaPredicted RBP22.35■■□□□ 1.17
UPK3B-203ENST00000394849 PLA2G4DQ86XP0 818 aa22.35■■□□□ 1.17
UPK3B-203ENST00000394849 TMEM87AQ8NBN3 555 aa22.35■■□□□ 1.17
UPK3B-203ENST00000394849 FAM167AQ96KS9 214 aa22.35■■□□□ 1.17
UPK3B-203ENST00000394849 RNF19AQ9NV58 838 aa22.35■■□□□ 1.17
UPK3B-203ENST00000394849 DHX15O43143 795 aaKnown RBP22.34■■□□□ 1.17
UPK3B-203ENST00000394849 CLASP2O75122 1294 aaKnown RBP22.34■■□□□ 1.17
UPK3B-203ENST00000394849 ATP4AP20648 1035 aa22.34■■□□□ 1.17
UPK3B-203ENST00000394849 MICU3Q86XE3 530 aa22.34■■□□□ 1.17
UPK3B-203ENST00000394849 PPP1R16BQ96T49 567 aa22.34■■□□□ 1.17
UPK3B-203ENST00000394849 DACT1Q9NYF0 836 aa22.34■■□□□ 1.17
UPK3B-203ENST00000394849 A0A0U1RQF3 1178 aa22.33■■□□□ 1.17
UPK3B-203ENST00000394849 SMCO2A6NFE2 343 aa22.33■■□□□ 1.17
UPK3B-203ENST00000394849 PSAPP07602 524 aa22.33■■□□□ 1.17
UPK3B-203ENST00000394849 CYP3A4P08684 503 aa22.33■■□□□ 1.17
UPK3B-203ENST00000394849 CLK2P49760 499 aaKnown RBP22.33■■□□□ 1.17
UPK3B-203ENST00000394849 POLGP54098 1239 aaPredicted RBP22.33■■□□□ 1.17
UPK3B-203ENST00000394849 NLRP11P59045 1033 aaKnown RBP22.33■■□□□ 1.17
UPK3B-203ENST00000394849 SETQ01105 290 aaPredicted RBP22.33■■□□□ 1.17
UPK3B-203ENST00000394849 TMEM169Q96HH4 297 aa22.33■■□□□ 1.17
UPK3B-203ENST00000394849 PGBD1Q96JS3 809 aa22.33■■□□□ 1.17
UPK3B-203ENST00000394849 BARHL2Q9NY43 387 aa22.33■■□□□ 1.17
UPK3B-203ENST00000394849 DBR1Q9UK59 544 aaKnown RBP22.33■■□□□ 1.17
UPK3B-203ENST00000394849 AKT3Q9Y243 479 aa22.33■■□□□ 1.17
UPK3B-203ENST00000394849 PCDHA10Q9Y5I2 948 aa22.33■■□□□ 1.17
UPK3B-203ENST00000394849 IRAK3Q9Y616 596 aa22.33■■□□□ 1.17
UPK3B-203ENST00000394849 CNTNAP5Q8WYK1 1306 aa22.32■■□□□ 1.16
UPK3B-203ENST00000394849 CXCL14O95715 111 aa22.32■■□□□ 1.16
UPK3B-203ENST00000394849 PBX3P40426 434 aa22.32■■□□□ 1.16
UPK3B-203ENST00000394849 TYW1BQ6NUM6 668 aa22.32■■□□□ 1.16
UPK3B-203ENST00000394849 ZNF577Q9BSK1 485 aa22.32■■□□□ 1.16
UPK3B-203ENST00000394849 ADAMTS10Q9H324 1103 aa22.32■■□□□ 1.16
UPK3B-203ENST00000394849 LIMD1Q9UGP4 676 aa22.32■■□□□ 1.16
UPK3B-203ENST00000394849 FAM86B1E9PN63 330 aa22.31■■□□□ 1.16
UPK3B-203ENST00000394849 FAM86B2P0C5J1 330 aa22.31■■□□□ 1.16
UPK3B-203ENST00000394849 CDC42EP1Q00587 391 aa22.31■■□□□ 1.16
UPK3B-203ENST00000394849 CLLU1OSQ5K130 101 aa22.31■■□□□ 1.16
UPK3B-203ENST00000394849 RARS2Q5T160 578 aaKnown RBP22.31■■□□□ 1.16
UPK3B-203ENST00000394849 EFCAB12Q6NXP0 572 aa22.31■■□□□ 1.16
UPK3B-203ENST00000394849 PPFIBP1Q86W92 1011 aa22.31■■□□□ 1.16
UPK3B-203ENST00000394849 RAB11FIP4Q86YS3 637 aa22.31■■□□□ 1.16
UPK3B-203ENST00000394849 RNF169Q8NCN4 708 aa22.31■■□□□ 1.16
UPK3B-203ENST00000394849 ACSF2Q96CM8 615 aaPredicted RBP22.31■■□□□ 1.16
UPK3B-203ENST00000394849 CYP26B1Q9NR63 512 aa22.31■■□□□ 1.16
UPK3B-203ENST00000394849 STK39Q9UEW8 545 aa22.31■■□□□ 1.16
UPK3B-203ENST00000394849 GVINP1Q7Z2Y8 2422 aa22.3■■□□□ 1.16
UPK3B-203ENST00000394849 WDR87Q6ZQQ6 2873 aa22.3■■□□□ 1.16
UPK3B-203ENST00000394849 IGLV3-22A0A075B6J6 115 aa22.3■■□□□ 1.16
UPK3B-203ENST00000394849 CA8P35219 290 aa22.3■■□□□ 1.16
UPK3B-203ENST00000394849 CLCN3P51790 818 aa22.3■■□□□ 1.16
UPK3B-203ENST00000394849 BCAR1P56945 870 aa22.3■■□□□ 1.16
UPK3B-203ENST00000394849 APOA5Q6Q788 366 aa22.3■■□□□ 1.16
UPK3B-203ENST00000394849 ZNF598Q86UK7 904 aaKnown RBP22.3■■□□□ 1.16
UPK3B-203ENST00000394849 VPS52Q8N1B4 723 aa22.3■■□□□ 1.16
UPK3B-203ENST00000394849 CHST12Q9NRB3 414 aa22.3■■□□□ 1.16
UPK3B-203ENST00000394849 NRBP2Q9NSY0 501 aa22.3■■□□□ 1.16
UPK3B-203ENST00000394849 CDH22Q9UJ99 828 aa22.3■■□□□ 1.16
UPK3B-203ENST00000394849 V9GY48 417 aaPredicted RBP22.3■■□□□ 1.16
UPK3B-203ENST00000394849 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.29■■□□□ 1.16
UPK3B-203ENST00000394849 SLC27A2O14975 620 aa22.29■■□□□ 1.16
UPK3B-203ENST00000394849 ASGR2P07307 311 aa22.29■■□□□ 1.16
UPK3B-203ENST00000394849 DARSP14868 501 aaKnown RBP22.29■■□□□ 1.16
UPK3B-203ENST00000394849 METAP2P50579 478 aaKnown RBP eCLIP22.29■■□□□ 1.16
UPK3B-203ENST00000394849 RTN1Q16799 776 aa22.29■■□□□ 1.16
UPK3B-203ENST00000394849 OTOP3Q7RTS5 596 aa22.29■■□□□ 1.16
UPK3B-203ENST00000394849 FRMD5Q7Z6J6 570 aa22.29■■□□□ 1.16
UPK3B-203ENST00000394849 LINC01465Q8N7H1 131 aa22.29■■□□□ 1.16
UPK3B-203ENST00000394849 HELQQ8TDG4 1101 aa22.29■■□□□ 1.16
UPK3B-203ENST00000394849 CRYGNQ8WXF5 182 aa22.29■■□□□ 1.16
UPK3B-203ENST00000394849 RTP3Q9BQQ7 232 aa22.29■■□□□ 1.16
UPK3B-203ENST00000394849 ZBP1Q9H171 429 aa22.29■■□□□ 1.16
UPK3B-203ENST00000394849 CTSAP10619 480 aa22.28■■□□□ 1.16
UPK3B-203ENST00000394849 SKIP12755 728 aa22.28■■□□□ 1.16
UPK3B-203ENST00000394849 ID4P47928 161 aa22.28■■□□□ 1.16
UPK3B-203ENST00000394849 FUT2Q10981 343 aa22.28■■□□□ 1.16
UPK3B-203ENST00000394849 DDX53Q86TM3 631 aaKnown RBP22.28■■□□□ 1.16
UPK3B-203ENST00000394849 CABP7Q86V35 215 aa22.28■■□□□ 1.16
UPK3B-203ENST00000394849 SCLT1Q96NL6 688 aa22.28■■□□□ 1.16
UPK3B-203ENST00000394849 TRAIPQ9BWF2 469 aa22.28■■□□□ 1.16
UPK3B-203ENST00000394849 GABBR1Q9UBS5 961 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms