RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 TDRD12Q587J7 1177 aaKnown RBP16.92■□□□□ 0.3
PTBP1-204ENST00000394601 ACER1Q8TDN7 264 aa16.92■□□□□ 0.3
PTBP1-204ENST00000394601 DDX20Q9UHI6 824 aaKnown RBP16.92■□□□□ 0.3
PTBP1-204ENST00000394601 FBXL5Q9UKA1 691 aa16.92■□□□□ 0.3
PTBP1-204ENST00000394601 CNTNAP1P78357 1384 aa16.92■□□□□ 0.3
PTBP1-204ENST00000394601 G3V3G9 751 aa16.92■□□□□ 0.3
PTBP1-204ENST00000394601 CHRNA5P30532 468 aa16.92■□□□□ 0.3
PTBP1-204ENST00000394601 MYO1EQ12965 1108 aa16.92■□□□□ 0.3
PTBP1-204ENST00000394601 PPP1R7Q15435 360 aa16.92■□□□□ 0.3
PTBP1-204ENST00000394601 SNCBQ16143 134 aa16.92■□□□□ 0.3
PTBP1-204ENST00000394601 DCAF8Q5TAQ9 597 aa16.92■□□□□ 0.3
PTBP1-204ENST00000394601 LRRC57Q8N9N7 239 aa16.92■□□□□ 0.3
PTBP1-204ENST00000394601 ZNF473Q8WTR7 871 aaKnown RBP16.92■□□□□ 0.3
PTBP1-204ENST00000394601 SPDL1Q96EA4 605 aa16.92■□□□□ 0.3
PTBP1-204ENST00000394601 CCT8L2Q96SF2 557 aa16.92■□□□□ 0.3
PTBP1-204ENST00000394601 SH3GL2Q99962 352 aa16.92■□□□□ 0.3
PTBP1-204ENST00000394601 KIF9Q9HAQ2 790 aa16.92■□□□□ 0.3
PTBP1-204ENST00000394601 SPDYE3A6NKU9 549 aa16.91■□□□□ 0.3
PTBP1-204ENST00000394601 PRKCIP41743 596 aa16.91■□□□□ 0.3
PTBP1-204ENST00000394601 PPP2R5CQ13362 524 aa16.91■□□□□ 0.3
PTBP1-204ENST00000394601 SPRED3Q2MJR0 410 aa16.91■□□□□ 0.3
PTBP1-204ENST00000394601 C8orf74Q6P047 294 aa16.91■□□□□ 0.3
PTBP1-204ENST00000394601 DNAAF5Q86Y56 855 aa16.91■□□□□ 0.3
PTBP1-204ENST00000394601 KLHL7Q8IXQ5 586 aa16.91■□□□□ 0.3
PTBP1-204ENST00000394601 TYW1Q9NV66 732 aaKnown RBP16.91■□□□□ 0.3
PTBP1-204ENST00000394601 CCDC189A1A4V9 331 aa16.91■□□□□ 0.3
PTBP1-204ENST00000394601 FAM153BP0C7A2 387 aa16.91■□□□□ 0.3
PTBP1-204ENST00000394601 CCNHP51946 323 aaPredicted RBP16.91■□□□□ 0.3
PTBP1-204ENST00000394601 RAPGEF1Q13905 1077 aa16.91■□□□□ 0.3
PTBP1-204ENST00000394601 FAM153CQ494X1 144 aa16.91■□□□□ 0.3
PTBP1-204ENST00000394601 IQCEQ6IPM2 695 aa16.91■□□□□ 0.3
PTBP1-204ENST00000394601 HIBCHQ6NVY1 386 aaPredicted RBP16.91■□□□□ 0.3
PTBP1-204ENST00000394601 SLC5A5Q92911 643 aa16.91■□□□□ 0.3
PTBP1-204ENST00000394601 EPB41L5Q9HCM4 733 aa16.91■□□□□ 0.3
PTBP1-204ENST00000394601 GDF3Q9NR23 364 aa16.91■□□□□ 0.3
PTBP1-204ENST00000394601 FAM153AQ9UHL3 310 aa16.91■□□□□ 0.3
PTBP1-204ENST00000394601 MYH11P35749 1972 aa16.91■□□□□ 0.3
PTBP1-204ENST00000394601 RGPD3A6NKT7 1758 aaPredicted RBP16.91■□□□□ 0.3
PTBP1-204ENST00000394601 RGPD4Q7Z3J3 1758 aa16.91■□□□□ 0.3
PTBP1-204ENST00000394601 AFPP02771 609 aaKnown RBP16.91■□□□□ 0.3
PTBP1-204ENST00000394601 NR3C1P04150 777 aa16.91■□□□□ 0.3
PTBP1-204ENST00000394601 GLI1P08151 1106 aa16.91■□□□□ 0.3
PTBP1-204ENST00000394601 ACCSLQ4AC99 568 aa16.91■□□□□ 0.3
PTBP1-204ENST00000394601 MICALCLQ6ZW33 695 aa16.91■□□□□ 0.3
PTBP1-204ENST00000394601 ERMNQ8TAM6 284 aa16.91■□□□□ 0.3
PTBP1-204ENST00000394601 ZBTB10Q96DT7 871 aa16.91■□□□□ 0.3
PTBP1-204ENST00000394601 STIM2Q9P246 746 aa16.91■□□□□ 0.3
PTBP1-204ENST00000394601 ARMCX3Q9UH62 379 aaPredicted RBP16.91■□□□□ 0.3
PTBP1-204ENST00000394601 PACSIN2Q9UNF0 486 aaPredicted RBP16.91■□□□□ 0.3
PTBP1-204ENST00000394601 L3MBTL1Q9Y468 752 aa16.91■□□□□ 0.3
PTBP1-204ENST00000394601 FER1L6Q2WGJ9 1857 aa16.91■□□□□ 0.3
PTBP1-204ENST00000394601 BHMG1C9JSJ3 638 aaPredicted RBP16.9■□□□□ 0.3
PTBP1-204ENST00000394601 SLC16A3O15427 465 aaKnown RBP16.9■□□□□ 0.3
PTBP1-204ENST00000394601 BUB1BO60566 1050 aaPredicted RBP16.9■□□□□ 0.3
PTBP1-204ENST00000394601 FTCDO95954 541 aa16.9■□□□□ 0.3
PTBP1-204ENST00000394601 CARSP49589 748 aaKnown RBP16.9■□□□□ 0.3
PTBP1-204ENST00000394601 NFIL3Q16649 462 aa16.9■□□□□ 0.3
PTBP1-204ENST00000394601 CSRNP1Q96S65 589 aa16.9■□□□□ 0.3
PTBP1-204ENST00000394601 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.9■□□□□ 0.3
PTBP1-204ENST00000394601 TMX2Q9Y320 296 aa16.9■□□□□ 0.3
PTBP1-204ENST00000394601 A0A1B0GUA9 196 aa16.9■□□□□ 0.3
PTBP1-204ENST00000394601 SFI1A8K8P3 1242 aa16.9■□□□□ 0.3
PTBP1-204ENST00000394601 ZNF131P52739 623 aa16.9■□□□□ 0.3
PTBP1-204ENST00000394601 ARID5AQ03989 594 aa16.9■□□□□ 0.3
PTBP1-204ENST00000394601 KLHL30Q0D2K2 578 aa16.9■□□□□ 0.3
PTBP1-204ENST00000394601 CDAN1Q8IWY9 1227 aa16.9■□□□□ 0.3
PTBP1-204ENST00000394601 PIGOQ8TEQ8 1089 aa16.9■□□□□ 0.3
PTBP1-204ENST00000394601 STRA6Q9BX79 667 aa16.9■□□□□ 0.3
PTBP1-204ENST00000394601 GPR88Q9GZN0 384 aa16.9■□□□□ 0.3
PTBP1-204ENST00000394601 RANBP17Q9H2T7 1088 aaKnown RBP16.9■□□□□ 0.3
PTBP1-204ENST00000394601 ZHX3Q9H4I2 956 aa16.9■□□□□ 0.3
PTBP1-204ENST00000394601 LOXHD1Q8IVV2 1947 aa16.89■□□□□ 0.3
PTBP1-204ENST00000394601 KRT18P05783 430 aaKnown RBP16.89■□□□□ 0.3
PTBP1-204ENST00000394601 NR1D1P20393 614 aa16.89■□□□□ 0.3
PTBP1-204ENST00000394601 CTTNQ14247 550 aaKnown RBP16.89■□□□□ 0.3
PTBP1-204ENST00000394601 RBM26Q5T8P6 1007 aaKnown RBP16.89■□□□□ 0.3
PTBP1-204ENST00000394601 KCTD17Q8N5Z5 321 aa16.89■□□□□ 0.3
PTBP1-204ENST00000394601 CAVIN3Q969G5 261 aa16.89■□□□□ 0.3
PTBP1-204ENST00000394601 SYT11Q9BT88 431 aa16.89■□□□□ 0.3
PTBP1-204ENST00000394601 FAM167BQ9BTA0 163 aa16.89■□□□□ 0.3
PTBP1-204ENST00000394601 ASIC2Q16515 512 aa16.89■□□□□ 0.29
PTBP1-204ENST00000394601 KIAA0753Q2KHM9 967 aa16.89■□□□□ 0.29
PTBP1-204ENST00000394601 GJB7Q6PEY0 223 aa16.89■□□□□ 0.29
PTBP1-204ENST00000394601 PGAP2Q9UHJ9 254 aa16.89■□□□□ 0.29
PTBP1-204ENST00000394601 TSKSQ9UJT2 592 aa16.89■□□□□ 0.29
PTBP1-204ENST00000394601 NAGPAQ9UK23 515 aa16.89■□□□□ 0.29
PTBP1-204ENST00000394601 RABGAP1Q9Y3P9 1069 aa16.89■□□□□ 0.29
PTBP1-204ENST00000394601 STK24Q9Y6E0 443 aa16.89■□□□□ 0.29
PTBP1-204ENST00000394601 ATP8B3O60423 1300 aa16.89■□□□□ 0.29
PTBP1-204ENST00000394601 EME2A4GXA9 379 aaPredicted RBP16.89■□□□□ 0.29
PTBP1-204ENST00000394601 COG2Q14746 738 aa16.89■□□□□ 0.29
PTBP1-204ENST00000394601 YIPF3Q9GZM5 350 aa16.89■□□□□ 0.29
PTBP1-204ENST00000394601 GOLGA6L10A6NI86 522 aa16.88■□□□□ 0.29
PTBP1-204ENST00000394601 STAT2P52630 851 aa16.88■□□□□ 0.29
PTBP1-204ENST00000394601 EXOC3L4Q17RC7 722 aa16.88■□□□□ 0.29
PTBP1-204ENST00000394601 ZC2HC1CQ53FD0 456 aaPredicted RBP16.88■□□□□ 0.29
PTBP1-204ENST00000394601 CPLX4Q7Z7G2 160 aa16.88■□□□□ 0.29
PTBP1-204ENST00000394601 NLRP14Q86W24 1093 aa16.88■□□□□ 0.29
PTBP1-204ENST00000394601 PARP9Q8IXQ6 854 aa16.88■□□□□ 0.29
PTBP1-204ENST00000394601 GMLQ99445 158 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms