RNA–Protein interactions for RNA: ENST00000393820.2

NPM1-203, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-203ENST00000393820 EPHX2P34913 555 aa6.33□□□□□ -1.4
NPM1-203ENST00000393820 EVCP57679 992 aa6.33□□□□□ -1.4
NPM1-203ENST00000393820 ETF1P62495 437 aaKnown RBP6.33□□□□□ -1.4
NPM1-203ENST00000393820 PPP2R2AP63151 447 aa6.33□□□□□ -1.4
NPM1-203ENST00000393820 SCRN1Q12765 414 aa6.33□□□□□ -1.4
NPM1-203ENST00000393820 STK3Q13188 491 aa6.33□□□□□ -1.4
NPM1-203ENST00000393820 PWP2Q15269 919 aaKnown RBP6.33□□□□□ -1.4
NPM1-203ENST00000393820 ZRSR1Q15695 479 aaKnown RBP6.33□□□□□ -1.4
NPM1-203ENST00000393820 PARP10Q53GL7 1025 aa6.33□□□□□ -1.4
NPM1-203ENST00000393820 C11orf57Q6ZUT1 292 aaPredicted RBP6.33□□□□□ -1.4
NPM1-203ENST00000393820 USP50Q70EL3 339 aaPredicted RBP6.33□□□□□ -1.4
NPM1-203ENST00000393820 ZNF589Q86UQ0 364 aaPredicted RBP6.33□□□□□ -1.4
NPM1-203ENST00000393820 SLC51AQ86UW1 340 aa6.33□□□□□ -1.4
NPM1-203ENST00000393820 LRRTM3Q86VH5 581 aa6.33□□□□□ -1.4
NPM1-203ENST00000393820 MCATQ8IVS2 390 aaKnown RBP6.33□□□□□ -1.4
NPM1-203ENST00000393820 SYNE4Q8N205 404 aa6.33□□□□□ -1.4
NPM1-203ENST00000393820 NSUN7Q8NE18 718 aaKnown RBP6.33□□□□□ -1.4
NPM1-203ENST00000393820 FAM13CQ8NE31 585 aa6.33□□□□□ -1.4
NPM1-203ENST00000393820 MRPS27Q92552 414 aaKnown RBP6.33□□□□□ -1.4
NPM1-203ENST00000393820 RPGRQ92834 1020 aaKnown RBP6.33□□□□□ -1.4
NPM1-203ENST00000393820 DHRS1Q96LJ7 313 aa6.33□□□□□ -1.4
NPM1-203ENST00000393820 HAUS7Q99871 368 aa6.33□□□□□ -1.4
NPM1-203ENST00000393820 AARSD1Q9BTE6 412 aaKnown RBP6.33□□□□□ -1.4
NPM1-203ENST00000393820 CALCOCO1Q9P1Z2 691 aa6.33□□□□□ -1.4
NPM1-203ENST00000393820 MAGEC2Q9UBF1 373 aaPredicted RBP6.33□□□□□ -1.4
NPM1-203ENST00000393820 SUCOQ9UBS9 1254 aaKnown RBP6.33□□□□□ -1.4
NPM1-203ENST00000393820 TJP2Q9UDY2 1190 aa6.33□□□□□ -1.4
NPM1-203ENST00000393820 PPP1R9AQ9ULJ8 1098 aa6.33□□□□□ -1.4
NPM1-203ENST00000393820 MAP3K15Q6ZN16 1313 aa6.33□□□□□ -1.4
NPM1-203ENST00000393820 SH3TC1Q8TE82 1336 aa6.33□□□□□ -1.4
NPM1-203ENST00000393820 DNAJC25-GNG10A0A024R161 153 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 IKBKBO14920 756 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 RGS13O14921 159 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 CBFA2T2O43439 604 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 DHX16O60231 1041 aaKnown RBP6.32□□□□□ -1.4
NPM1-203ENST00000393820 JAK2O60674 1132 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 PEX14O75381 377 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 UBOX5O94941 541 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 YEATS4O95619 227 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 CAPNS1P04632 268 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 EPHX1P07099 455 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 CYP21A2P08686 494 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 NAT2P11245 290 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 ECE1P42892 770 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 PREPP48147 710 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 YARSP54577 528 aaKnown RBP6.32□□□□□ -1.4
NPM1-203ENST00000393820 ERVK-24P63145 666 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 GCKRQ14397 625 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 DEFB115Q30KQ5 88 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 ZBTB37Q5TC79 503 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 TDRD10Q5VZ19 366 aaKnown RBP6.32□□□□□ -1.4
NPM1-203ENST00000393820 ZNF227Q86WZ6 799 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 MRPL41Q8IXM3 137 aaKnown RBP6.32□□□□□ -1.4
NPM1-203ENST00000393820 SUPT20HQ8NEM7 779 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 KCNG4Q8TDN1 519 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 RBM17Q96I25 401 aaKnown RBP6.32□□□□□ -1.4
NPM1-203ENST00000393820 TMEM87BQ96K49 555 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 TIGD1Q96MW7 591 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 SDF4Q9BRK5 362 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 GPR108Q9NPR9 543 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 ZNF277Q9NRM2 450 aaPredicted RBP6.32□□□□□ -1.4
NPM1-203ENST00000393820 FAM86C1Q9NVL1 165 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 ARGLU1Q9NWB6 273 aaPredicted RBP6.32□□□□□ -1.4
NPM1-203ENST00000393820 APEX2Q9UBZ4 518 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 TCEAL9Q9UHQ7 104 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 FPGT-TNNI3KV9GXZ4 949 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 CDHR2Q9BYE9 1310 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 SALL1Q9NSC2 1324 aa6.32□□□□□ -1.4
NPM1-203ENST00000393820 KDM3BQ7LBC6 1761 aa6.31□□□□□ -1.4
NPM1-203ENST00000393820 MEGF11A6BM72 1044 aa6.31□□□□□ -1.4
NPM1-203ENST00000393820 USP27XA6NNY8 438 aa6.31□□□□□ -1.4
NPM1-203ENST00000393820 C9IYK1 514 aa6.31□□□□□ -1.4
NPM1-203ENST00000393820 CA12O43570 354 aa6.31□□□□□ -1.4
NPM1-203ENST00000393820 PRC1O43663 620 aa6.31□□□□□ -1.4
NPM1-203ENST00000393820 BBOX1O75936 387 aa6.31□□□□□ -1.4
NPM1-203ENST00000393820 EYA4O95677 639 aa6.31□□□□□ -1.4
NPM1-203ENST00000393820 IGKV5-2P06315 115 aa6.31□□□□□ -1.4
NPM1-203ENST00000393820 SFPQP23246 707 aaKnown RBP eCLIP6.31□□□□□ -1.4
NPM1-203ENST00000393820 ME1P48163 572 aa6.31□□□□□ -1.4
NPM1-203ENST00000393820 EPHB1P54762 984 aa6.31□□□□□ -1.4
NPM1-203ENST00000393820 TTF1Q15361 905 aaPredicted RBP6.31□□□□□ -1.4
NPM1-203ENST00000393820 NFE2Q16621 373 aaPredicted RBP6.31□□□□□ -1.4
NPM1-203ENST00000393820 RABL6Q3YEC7 729 aaPredicted RBP6.31□□□□□ -1.4
NPM1-203ENST00000393820 HSP90AB3PQ58FF7 597 aa6.31□□□□□ -1.4
NPM1-203ENST00000393820 PPM1JQ5JR12 505 aa6.31□□□□□ -1.4
NPM1-203ENST00000393820 SLC10A5Q5PT55 438 aa6.31□□□□□ -1.4
NPM1-203ENST00000393820 E4F1Q66K89 784 aaPredicted RBP6.31□□□□□ -1.4
NPM1-203ENST00000393820 FDX2Q6P4F2 183 aa6.31□□□□□ -1.4
NPM1-203ENST00000393820 FBXO38Q6PIJ6 1188 aa6.31□□□□□ -1.4
NPM1-203ENST00000393820 BRAPQ7Z569 592 aa6.31□□□□□ -1.4
NPM1-203ENST00000393820 SCUBE1Q8IWY4 988 aa6.31□□□□□ -1.4
NPM1-203ENST00000393820 PHACTR4Q8IZ21 702 aa6.31□□□□□ -1.4
NPM1-203ENST00000393820 ZNF34Q8IZ26 560 aa6.31□□□□□ -1.4
NPM1-203ENST00000393820 ZNF513Q8N8E2 541 aaPredicted RBP6.31□□□□□ -1.4
NPM1-203ENST00000393820 FSIP1Q8NA03 581 aa6.31□□□□□ -1.4
NPM1-203ENST00000393820 KBTBD3Q8NAB2 608 aa6.31□□□□□ -1.4
NPM1-203ENST00000393820 DDX11Q96FC9 970 aa6.31□□□□□ -1.4
NPM1-203ENST00000393820 HHIPL1Q96JK4 782 aa6.31□□□□□ -1.4
NPM1-203ENST00000393820 TCEANC2Q96MN5 208 aa6.31□□□□□ -1.4
NPM1-203ENST00000393820 USP28Q96RU2 1077 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms