RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 USP40Q9NVE5 1235 aa15.74■□□□□ 0.11
SFXN3-202ENST00000393459 ANKIB1Q9P2G1 1089 aa15.74■□□□□ 0.11
SFXN3-202ENST00000393459 G3BP2Q9UN86 482 aaKnown RBP15.74■□□□□ 0.11
SFXN3-202ENST00000393459 COL1A1P02452 1464 aaPredicted RBP15.73■□□□□ 0.11
SFXN3-202ENST00000393459 DDX3XO00571 662 aaKnown RBP eCLIP15.73■□□□□ 0.11
SFXN3-202ENST00000393459 TARSP26639 723 aaKnown RBP15.73■□□□□ 0.11
SFXN3-202ENST00000393459 TLDC1Q6P9B6 456 aa15.73■□□□□ 0.11
SFXN3-202ENST00000393459 MYH1P12882 1939 aa15.73■□□□□ 0.11
SFXN3-202ENST00000393459 ZBTB39O15060 712 aa15.73■□□□□ 0.11
SFXN3-202ENST00000393459 GCNT3O95395 438 aa15.73■□□□□ 0.11
SFXN3-202ENST00000393459 TNFRSF8P28908 595 aa15.73■□□□□ 0.11
SFXN3-202ENST00000393459 KRT25Q7Z3Z0 450 aa15.73■□□□□ 0.11
SFXN3-202ENST00000393459 IRF2BP2Q7Z5L9 587 aa15.73■□□□□ 0.11
SFXN3-202ENST00000393459 C1orf54Q8WWF1 131 aa15.73■□□□□ 0.11
SFXN3-202ENST00000393459 CTTNBP2NLQ9P2B4 639 aa15.73■□□□□ 0.11
SFXN3-202ENST00000393459 NKX1-2Q9UD57 310 aaPredicted RBP15.73■□□□□ 0.11
SFXN3-202ENST00000393459 SWAP70Q9UH65 585 aa15.73■□□□□ 0.11
SFXN3-202ENST00000393459 TMEM120BA0PK00 339 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 WDR91A4D1P6 747 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 RASGRF2O14827 1237 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 CAMTA2O94983 1202 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 XRCC5P13010 732 aaKnown RBP15.72■□□□□ 0.11
SFXN3-202ENST00000393459 NQO1P15559 274 aaKnown RBP15.72■□□□□ 0.11
SFXN3-202ENST00000393459 HIBADHP31937 336 aaKnown RBP15.72■□□□□ 0.11
SFXN3-202ENST00000393459 NCALDP61601 193 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 LRRC63Q05C16 580 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 COG2Q14746 738 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 SRRM1Q8IYB3 904 aaKnown RBP15.72■□□□□ 0.11
SFXN3-202ENST00000393459 ARMC2Q8NEN0 867 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 PIGOQ8TEQ8 1089 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 ZNF483Q8TF39 744 aaPredicted RBP15.72■□□□□ 0.11
SFXN3-202ENST00000393459 FAM84AQ96KN4 292 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 NOP53Q9NZM5 478 aaKnown RBP15.72■□□□□ 0.11
SFXN3-202ENST00000393459 MYH4Q9Y623 1939 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 RREB1Q92766 1687 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 FAM196BA6NMK8 535 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 M0R2N6 131 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 FLOT1O75955 427 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 AKAP3O75969 853 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 GNA11P29992 359 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 SSTR3P32745 418 aaPredicted RBP15.72■□□□□ 0.11
SFXN3-202ENST00000393459 RPL21P46778 160 aaKnown RBP15.72■□□□□ 0.11
SFXN3-202ENST00000393459 TUBP50607 506 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 MRPL12P52815 198 aaKnown RBP15.72■□□□□ 0.11
SFXN3-202ENST00000393459 PLCB4Q15147 1175 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 ZC2HC1CQ53FD0 456 aaPredicted RBP15.72■□□□□ 0.11
SFXN3-202ENST00000393459 ISLR2Q6UXK2 745 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 SFR1Q86XK3 245 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 JAMLQ86YT9 394 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 ATP8B4Q8TF62 1192 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 ATG4AQ8WYN0 398 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 SAAL1Q96ER3 474 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 ZNF317Q96PQ6 595 aaPredicted RBP15.72■□□□□ 0.11
SFXN3-202ENST00000393459 OSBPL1AQ9BXW6 950 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 ADAM7Q9H2U9 754 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 RNF14Q9UBS8 474 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 DDX25Q9UHL0 483 aaKnown RBP15.72■□□□□ 0.11
SFXN3-202ENST00000393459 ZNF652Q9Y2D9 606 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 MYH3P11055 1940 aa15.72■□□□□ 0.11
SFXN3-202ENST00000393459 KCNQ2O43526 872 aa15.71■□□□□ 0.11
SFXN3-202ENST00000393459 RTN2O75298 545 aa15.71■□□□□ 0.11
SFXN3-202ENST00000393459 PLA2G4BP0C869 781 aa15.71■□□□□ 0.11
SFXN3-202ENST00000393459 MTMR3Q13615 1198 aa15.71■□□□□ 0.11
SFXN3-202ENST00000393459 ANKRD20A2Q5SQ80 823 aa15.71■□□□□ 0.11
SFXN3-202ENST00000393459 ANKRD20A1Q5TYW2 823 aa15.71■□□□□ 0.11
SFXN3-202ENST00000393459 ANKRD20A3Q5VUR7 823 aa15.71■□□□□ 0.11
SFXN3-202ENST00000393459 CCDC50Q8IVM0 306 aa15.71■□□□□ 0.11
SFXN3-202ENST00000393459 FITM2Q8N6M3 262 aa15.71■□□□□ 0.11
SFXN3-202ENST00000393459 RARAP10276 462 aa15.71■□□□□ 0.11
SFXN3-202ENST00000393459 PON1P27169 355 aa15.71■□□□□ 0.11
SFXN3-202ENST00000393459 RCAN1P53805 252 aa15.71■□□□□ 0.11
SFXN3-202ENST00000393459 CYP4F22Q6NT55 531 aa15.71■□□□□ 0.11
SFXN3-202ENST00000393459 NT5DC3Q86UY8 548 aa15.71■□□□□ 0.11
SFXN3-202ENST00000393459 HOOK3Q86VS8 718 aa15.71■□□□□ 0.11
SFXN3-202ENST00000393459 VSIG1Q86XK7 387 aa15.71■□□□□ 0.11
SFXN3-202ENST00000393459 KIAA0825Q8IV33 1275 aa15.71■□□□□ 0.11
SFXN3-202ENST00000393459 ARHGEF2Q92974 986 aaKnown RBP15.71■□□□□ 0.11
SFXN3-202ENST00000393459 SPATS2LQ9NUQ6 558 aaKnown RBP15.71■□□□□ 0.11
SFXN3-202ENST00000393459 HAO1Q9UJM8 370 aa15.71■□□□□ 0.11
SFXN3-202ENST00000393459 SPDYE5A6NIY4 337 aa15.71■□□□□ 0.1
SFXN3-202ENST00000393459 SMIM24O75264 130 aa15.71■□□□□ 0.1
SFXN3-202ENST00000393459 GRM4Q14833 912 aa15.71■□□□□ 0.1
SFXN3-202ENST00000393459 LRIG3Q6UXM1 1119 aa15.71■□□□□ 0.1
SFXN3-202ENST00000393459 ATXN2LQ8WWM7 1075 aaKnown RBP15.71■□□□□ 0.1
SFXN3-202ENST00000393459 ALG13Q9NP73 1137 aaKnown RBP15.71■□□□□ 0.1
SFXN3-202ENST00000393459 TAF1P21675 1872 aa15.7■□□□□ 0.1
SFXN3-202ENST00000393459 SPATA31A6Q5VVP1 1343 aa15.7■□□□□ 0.1
SFXN3-202ENST00000393459 DLATP10515 647 aaKnown RBP15.7■□□□□ 0.1
SFXN3-202ENST00000393459 UBXN2AP68543 259 aa15.7■□□□□ 0.1
SFXN3-202ENST00000393459 KYNUQ16719 465 aa15.7■□□□□ 0.1
SFXN3-202ENST00000393459 TRIM59Q8IWR1 403 aa15.7■□□□□ 0.1
SFXN3-202ENST00000393459 LRRC57Q8N9N7 239 aa15.7■□□□□ 0.1
SFXN3-202ENST00000393459 DNAJC19Q96DA6 116 aa15.7■□□□□ 0.1
SFXN3-202ENST00000393459 SRP68Q9UHB9 627 aaKnown RBP15.7■□□□□ 0.1
SFXN3-202ENST00000393459 NID2Q14112 1375 aa15.7■□□□□ 0.1
SFXN3-202ENST00000393459 GSTTP1A0A1W2PQM5 241 aa15.7■□□□□ 0.1
SFXN3-202ENST00000393459 ABL2P42684 1182 aa15.7■□□□□ 0.1
SFXN3-202ENST00000393459 POLE2P56282 527 aa15.7■□□□□ 0.1
SFXN3-202ENST00000393459 ZFYVE27Q5T4F4 411 aa15.7■□□□□ 0.1
SFXN3-202ENST00000393459 SLC20A1Q8WUM9 679 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms