RNA–Protein interactions for RNA: ENST00000393243.5

GSE1-202, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 7,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-202ENST00000393243 ECT2Q9H8V3 914 aa14.32□□□□□ -0.12
GSE1-202ENST00000393243 PIH1D3Q9NQM4 214 aaKnown RBP14.32□□□□□ -0.12
GSE1-202ENST00000393243 SRP68Q9UHB9 627 aaKnown RBP14.32□□□□□ -0.12
GSE1-202ENST00000393243 E2F8A0AVK6 867 aa14.32□□□□□ -0.12
GSE1-202ENST00000393243 CCDC78A2IDD5 438 aa14.32□□□□□ -0.12
GSE1-202ENST00000393243 SEMA3EO15041 775 aa14.32□□□□□ -0.12
GSE1-202ENST00000393243 MOCS2O96007 188 aaPredicted RBP14.32□□□□□ -0.12
GSE1-202ENST00000393243 SH3RF3Q8TEJ3 882 aaPredicted RBP14.32□□□□□ -0.12
GSE1-202ENST00000393243 TMEM260Q9NX78 707 aa14.32□□□□□ -0.12
GSE1-202ENST00000393243 SERPINB2P05120 415 aa14.32□□□□□ -0.12
GSE1-202ENST00000393243 CCNE1P24864 410 aa14.32□□□□□ -0.12
GSE1-202ENST00000393243 CDK8P49336 464 aa14.32□□□□□ -0.12
GSE1-202ENST00000393243 COPS2P61201 443 aa14.32□□□□□ -0.12
GSE1-202ENST00000393243 RINLQ6ZS11 566 aa14.32□□□□□ -0.12
GSE1-202ENST00000393243 WDR48Q8TAF3 677 aa14.32□□□□□ -0.12
GSE1-202ENST00000393243 GOLGA8RI6L899 631 aa14.32□□□□□ -0.12
GSE1-202ENST00000393243 SNAP23O00161 211 aa14.32□□□□□ -0.12
GSE1-202ENST00000393243 KCNA4P22459 653 aa14.32□□□□□ -0.12
GSE1-202ENST00000393243 CCNA1P78396 465 aa14.32□□□□□ -0.12
GSE1-202ENST00000393243 ZBED2Q9BTP6 218 aa14.32□□□□□ -0.12
GSE1-202ENST00000393243 SLC16A4O15374 487 aa14.32□□□□□ -0.12
GSE1-202ENST00000393243 PAMP19021 973 aa14.32□□□□□ -0.12
GSE1-202ENST00000393243 RNF103-CHMP3A0A140T963 221 aa14.32□□□□□ -0.12
GSE1-202ENST00000393243 HSPA8P11142 646 aaKnown RBP14.32□□□□□ -0.12
GSE1-202ENST00000393243 RNF219Q5W0B1 726 aaPredicted RBP14.32□□□□□ -0.12
GSE1-202ENST00000393243 ARMCX2Q7L311 632 aa14.32□□□□□ -0.12
GSE1-202ENST00000393243 RAVER2Q9HCJ3 691 aaKnown RBP14.32□□□□□ -0.12
GSE1-202ENST00000393243 CASS4Q9NQ75 786 aa14.32□□□□□ -0.12
GSE1-202ENST00000393243 SLC8A2Q9UPR5 921 aa14.32□□□□□ -0.12
GSE1-202ENST00000393243 FAM95CA0A1B0GW59 222 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 E5RI56 91 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 MDM2Q00987 491 aaPredicted RBP14.31□□□□□ -0.12
GSE1-202ENST00000393243 CATSPER4Q7RTX7 472 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 DDIASQ8IXT1 998 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 ACTR5Q9H9F9 607 aaPredicted RBP14.31□□□□□ -0.12
GSE1-202ENST00000393243 ATP8B3O60423 1300 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 LRRC53A6NM62 1247 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 STAT3P40763 770 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 CCHCR1Q8TD31 782 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.31□□□□□ -0.12
GSE1-202ENST00000393243 KDM5AP29375 1690 aaKnown RBP14.31□□□□□ -0.12
GSE1-202ENST00000393243 USP17L5A8MUK1 530 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 HMGB1P1B2RPK0 211 aaPredicted RBP14.31□□□□□ -0.12
GSE1-202ENST00000393243 MFAP3LO75121 409 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 GPS1Q13098 491 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 RESTQ13127 1097 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 LRRC36Q1X8D7 754 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 CYFIP1Q7L576 1253 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 B4GALNT2Q8NHY0 566 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 EGFL8Q99944 293 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 C11orf70Q9BRQ4 267 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 TMEM247A6NEH6 219 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 WDR75Q8IWA0 830 aaKnown RBP14.31□□□□□ -0.12
GSE1-202ENST00000393243 TUBB6Q9BUF5 446 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 NUP85Q9BW27 656 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 KANSL2Q9H9L4 492 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 DCTN3O75935 186 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 ACAD11Q709F0 780 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 SLC17A8Q8NDX2 589 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 DHX38Q92620 1227 aaKnown RBP14.31□□□□□ -0.12
GSE1-202ENST00000393243 ZCCHC17Q9NP64 241 aaKnown RBP14.31□□□□□ -0.12
GSE1-202ENST00000393243 ADORA2BP29275 332 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 ANKMY2Q8IV38 441 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 PPHLN1Q8NEY8 458 aaKnown RBP14.31□□□□□ -0.12
GSE1-202ENST00000393243 SLC26A7Q8TE54 656 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 ULK4Q96C45 1275 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 BTBD6Q96KE9 485 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 SIK2Q9H0K1 926 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 NDFIP2Q9NV92 336 aa14.31□□□□□ -0.12
GSE1-202ENST00000393243 FAM135BQ49AJ0 1406 aa14.3□□□□□ -0.12
GSE1-202ENST00000393243 PRPF4O43172 522 aaKnown RBP eCLIP14.3□□□□□ -0.123e-6■■■■□ 20
GSE1-202ENST00000393243 FAM83BQ5T0W9 1011 aa14.3□□□□□ -0.12
GSE1-202ENST00000393243 CCDC17Q96LX7 622 aa14.3□□□□□ -0.12
GSE1-202ENST00000393243 ATG3Q9NT62 314 aa14.3□□□□□ -0.12
GSE1-202ENST00000393243 COBLL1Q53SF7 1204 aa14.3□□□□□ -0.12
GSE1-202ENST00000393243 LRRC8EQ6NSJ5 796 aa14.3□□□□□ -0.12
GSE1-202ENST00000393243 SFR1Q86XK3 245 aa14.3□□□□□ -0.12
GSE1-202ENST00000393243 SAAL1Q96ER3 474 aa14.3□□□□□ -0.12
GSE1-202ENST00000393243 NOP53Q9NZM5 478 aaKnown RBP14.3□□□□□ -0.12
GSE1-202ENST00000393243 OCA2Q04671 838 aa14.3□□□□□ -0.12
GSE1-202ENST00000393243 ZNF699Q32M78 642 aa14.3□□□□□ -0.12
GSE1-202ENST00000393243 C1orf54Q8WWF1 131 aa14.3□□□□□ -0.12
GSE1-202ENST00000393243 PANX2Q96RD6 677 aa14.3□□□□□ -0.12
GSE1-202ENST00000393243 TGS1Q96RS0 853 aaKnown RBP14.3□□□□□ -0.12
GSE1-202ENST00000393243 STX18Q9P2W9 335 aaKnown RBP14.3□□□□□ -0.12
GSE1-202ENST00000393243 USP17L15C9J2P7 530 aa14.3□□□□□ -0.12
GSE1-202ENST00000393243 USP17L13C9JLJ4 530 aa14.3□□□□□ -0.12
GSE1-202ENST00000393243 USP17L11C9JVI0 530 aa14.3□□□□□ -0.12
GSE1-202ENST00000393243 USP17L18D6R9N7 530 aa14.3□□□□□ -0.12
GSE1-202ENST00000393243 USP17L22D6RA61 530 aa14.3□□□□□ -0.12
GSE1-202ENST00000393243 USP17L17D6RBQ6 530 aa14.3□□□□□ -0.12
GSE1-202ENST00000393243 USP17L19D6RCP7 530 aa14.3□□□□□ -0.12
GSE1-202ENST00000393243 USP17L20D6RJB6 530 aa14.3□□□□□ -0.12
GSE1-202ENST00000393243 E9PMD0 336 aa14.3□□□□□ -0.12
GSE1-202ENST00000393243 ARL4CP56559 192 aa14.3□□□□□ -0.12
GSE1-202ENST00000393243 USP17L24Q0WX57 530 aa14.3□□□□□ -0.12
GSE1-202ENST00000393243 EFTUD2Q15029 972 aaKnown RBP eCLIP14.3□□□□□ -0.123e-7■■■□□ 18.9
GSE1-202ENST00000393243 USP17L6PQ6QN14 398 aa14.3□□□□□ -0.12
GSE1-202ENST00000393243 RHPN2Q8IUC4 686 aa14.3□□□□□ -0.12
GSE1-202ENST00000393243 NAF1Q96HR8 494 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms