RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 ENTPD3O75355 529 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 CALCOCO2Q13137 446 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 RINT1Q6NUQ1 792 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 GSTA5Q7RTV2 222 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 DNAJC19Q96DA6 116 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 ACCSQ96QU6 501 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 MTRF1LQ9UGC7 380 aaKnown RBP11.4□□□□□ -0.58
CALD1-203ENST00000393118 SEPT9Q9UHD8 586 aaPredicted RBP11.4□□□□□ -0.58
CALD1-203ENST00000393118 ATF5Q9Y2D1 282 aaPredicted RBP11.4□□□□□ -0.58
CALD1-203ENST00000393118 SIK3Q9Y2K2 1263 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 PTPN22Q9Y2R2 807 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 MYH3P11055 1940 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 NWD2Q9ULI1 1742 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 NEFHP12036 1026 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 STRN3Q13033 797 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 SPP2Q13103 211 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 DACT2Q5SW24 774 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 LRRC55Q6ZSA7 311 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 RNF14Q9UBS8 474 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 CHORDC1Q9UHD1 332 aaPredicted RBP11.4□□□□□ -0.58
CALD1-203ENST00000393118 TAF1P21675 1872 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 PITPNM2Q9BZ72 1349 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 GOLGA8KD6RF30 607 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 EML1O00423 815 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 TBX3O15119 743 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 NKRFO15226 690 aaKnown RBP eCLIP11.4□□□□□ -0.58
CALD1-203ENST00000393118 POLD1P28340 1107 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 NNTQ13423 1086 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 SNCBQ16143 134 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 CPLX4Q7Z7G2 160 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 TRIM59Q8IWR1 403 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 HNRNPLLQ8WVV9 542 aaKnown RBP11.4□□□□□ -0.58
CALD1-203ENST00000393118 SAAL1Q96ER3 474 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 EHD4Q9H223 541 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 CD248Q9HCU0 757 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 TMOD4Q9NZQ9 345 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 ASIC3Q9UHC3 531 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 E7EVH7 732 aa11.4□□□□□ -0.59
CALD1-203ENST00000393118 MEIS2O14770 477 aa11.4□□□□□ -0.59
CALD1-203ENST00000393118 EVI5O60447 810 aa11.4□□□□□ -0.59
CALD1-203ENST00000393118 ARP10275 920 aa11.4□□□□□ -0.59
CALD1-203ENST00000393118 SREBF1P36956 1147 aa11.4□□□□□ -0.59
CALD1-203ENST00000393118 GRIPAP1Q4V328 841 aa11.4□□□□□ -0.59
CALD1-203ENST00000393118 EMBQ6PCB8 327 aa11.4□□□□□ -0.59
CALD1-203ENST00000393118 KMT5AQ9NQR1 393 aa11.4□□□□□ -0.59
CALD1-203ENST00000393118 ATP8A1Q9Y2Q0 1164 aa11.4□□□□□ -0.59
CALD1-203ENST00000393118 LRRIQ4A6NIV6 560 aa11.39□□□□□ -0.59
CALD1-203ENST00000393118 HOXA7P31268 230 aaPredicted RBP11.39□□□□□ -0.59
CALD1-203ENST00000393118 CARSP49589 748 aaKnown RBP11.39□□□□□ -0.59
CALD1-203ENST00000393118 KLHDC7AQ5VTJ3 777 aa11.39□□□□□ -0.59
CALD1-203ENST00000393118 CIAPIN1Q6FI81 312 aa11.39□□□□□ -0.59
CALD1-203ENST00000393118 OTUD6AQ7L8S5 288 aa11.39□□□□□ -0.59
CALD1-203ENST00000393118 RTKN2Q8IZC4 609 aa11.39□□□□□ -0.59
CALD1-203ENST00000393118 MAGOHBQ96A72 148 aaKnown RBP11.39□□□□□ -0.59
CALD1-203ENST00000393118 VCPKMTQ9H867 229 aa11.39□□□□□ -0.59
CALD1-203ENST00000393118 ANKFY1Q9P2R3 1169 aa11.39□□□□□ -0.59
CALD1-203ENST00000393118 EMSYQ7Z589 1322 aa11.39□□□□□ -0.59
CALD1-203ENST00000393118 EIF4E1BA6NMX2 242 aaKnown RBP11.39□□□□□ -0.59
CALD1-203ENST00000393118 LIG4P49917 911 aa11.39□□□□□ -0.59
CALD1-203ENST00000393118 PLTPP55058 493 aa11.39□□□□□ -0.59
CALD1-203ENST00000393118 PDCLQ13371 301 aa11.39□□□□□ -0.59
CALD1-203ENST00000393118 RASA3Q14644 834 aa11.39□□□□□ -0.59
CALD1-203ENST00000393118 COG2Q14746 738 aa11.39□□□□□ -0.59
CALD1-203ENST00000393118 PRAMEF18Q5VWM3 479 aa11.39□□□□□ -0.59
CALD1-203ENST00000393118 ZNF772Q68DY9 489 aaPredicted RBP11.39□□□□□ -0.59
CALD1-203ENST00000393118 SH2D3CQ8N5H7 860 aa11.39□□□□□ -0.59
CALD1-203ENST00000393118 IWS1Q96ST2 819 aa11.39□□□□□ -0.59
CALD1-203ENST00000393118 INTS2Q9H0H0 1204 aaKnown RBP11.39□□□□□ -0.59
CALD1-203ENST00000393118 AMACRQ9UHK6 382 aa11.39□□□□□ -0.59
CALD1-203ENST00000393118 HPCAL4Q9UM19 191 aa11.39□□□□□ -0.59
CALD1-203ENST00000393118 ITGB4P16144 1822 aa11.39□□□□□ -0.59
CALD1-203ENST00000393118 MYH13Q9UKX3 1938 aa11.39□□□□□ -0.59
CALD1-203ENST00000393118 TARSL2A2RTX5 802 aaKnown RBP11.39□□□□□ -0.59
CALD1-203ENST00000393118 ENO4A6NNW6 628 aa11.39□□□□□ -0.59
CALD1-203ENST00000393118 MYO1FO00160 1098 aa11.39□□□□□ -0.59
CALD1-203ENST00000393118 LRRC31Q6UY01 552 aa11.39□□□□□ -0.59
CALD1-203ENST00000393118 RNF207Q6ZRF8 634 aa11.39□□□□□ -0.59
CALD1-203ENST00000393118 ZNF653Q96CK0 615 aa11.39□□□□□ -0.59
CALD1-203ENST00000393118 IKZF4Q9H2S9 585 aa11.39□□□□□ -0.59
CALD1-203ENST00000393118 TMEM206Q9H813 350 aa11.39□□□□□ -0.59
CALD1-203ENST00000393118 TOGARAM1Q9Y4F4 1720 aa11.39□□□□□ -0.59
CALD1-203ENST00000393118 MYH14Q7Z406 1995 aaKnown RBP11.38□□□□□ -0.59
CALD1-203ENST00000393118 PON1P27169 355 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 GALCP54803 685 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 MTERF2Q49AM1 385 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 C10orf76Q5T2E6 689 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 RSBN1LQ6PCB5 846 aaPredicted RBP11.38□□□□□ -0.59
CALD1-203ENST00000393118 EEPD1Q7L9B9 569 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 PBKQ96KB5 322 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 SYNCQ9H7C4 482 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 FEM1BQ9UK73 627 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 ZSCAN5CA6NGD5 496 aaPredicted RBP11.38□□□□□ -0.59
CALD1-203ENST00000393118 SKAP2O75563 359 aaPredicted RBP11.38□□□□□ -0.59
CALD1-203ENST00000393118 QARSP47897 775 aaKnown RBP11.38□□□□□ -0.59
CALD1-203ENST00000393118 PDE6CP51160 858 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 DHX9Q08211 1270 aaKnown RBP11.38□□□□□ -0.59
CALD1-203ENST00000393118 KCNMA1Q12791 1236 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 EPHA7Q15375 998 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 SEPT7Q16181 437 aaKnown RBP11.38□□□□□ -0.59
CALD1-203ENST00000393118 RUFY4Q6ZNE9 571 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms