RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 FBXO25Q8TCJ0 367 aa12.41□□□□□ -0.42
PDCD4-202ENST00000393104 NSMCE1Q8WV22 266 aa12.41□□□□□ -0.42
PDCD4-202ENST00000393104 SLC35C1Q96A29 364 aa12.41□□□□□ -0.42
PDCD4-202ENST00000393104 CEP95Q96GE4 821 aa12.41□□□□□ -0.42
PDCD4-202ENST00000393104 DPH5Q9H2P9 285 aa12.41□□□□□ -0.42
PDCD4-202ENST00000393104 FRMPD4Q14CM0 1322 aa12.41□□□□□ -0.42
PDCD4-202ENST00000393104 KRIT1O00522 736 aa12.41□□□□□ -0.42
PDCD4-202ENST00000393104 MARCKSL1P49006 195 aa12.41□□□□□ -0.42
PDCD4-202ENST00000393104 ITIH4Q14624 930 aa12.41□□□□□ -0.42
PDCD4-202ENST00000393104 TMEM63BQ5T3F8 832 aa12.41□□□□□ -0.42
PDCD4-202ENST00000393104 TBC1D16Q8TBP0 767 aa12.41□□□□□ -0.42
PDCD4-202ENST00000393104 FAM163AQ96GL9 167 aaPredicted RBP12.41□□□□□ -0.42
PDCD4-202ENST00000393104 UIMC1Q96RL1 719 aa12.41□□□□□ -0.42
PDCD4-202ENST00000393104 MTMR7Q9Y216 660 aa12.41□□□□□ -0.42
PDCD4-202ENST00000393104 TRAF3IP3Q9Y228 551 aa12.41□□□□□ -0.42
PDCD4-202ENST00000393104 ATP2C2O75185 946 aa12.4□□□□□ -0.42
PDCD4-202ENST00000393104 MED24O75448 989 aa12.4□□□□□ -0.42
PDCD4-202ENST00000393104 CNGA2Q16280 664 aa12.4□□□□□ -0.42
PDCD4-202ENST00000393104 FAM26FQ5R3K3 315 aa12.4□□□□□ -0.42
PDCD4-202ENST00000393104 VSTM1Q6UX27 236 aa12.4□□□□□ -0.42
PDCD4-202ENST00000393104 C16orf86Q6ZW13 317 aa12.4□□□□□ -0.42
PDCD4-202ENST00000393104 TBC1D22AQ8WUA7 517 aa12.4□□□□□ -0.42
PDCD4-202ENST00000393104 SCLT1Q96NL6 688 aa12.4□□□□□ -0.42
PDCD4-202ENST00000393104 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.4□□□□□ -0.42
PDCD4-202ENST00000393104 VPS33BQ9H267 617 aa12.4□□□□□ -0.42
PDCD4-202ENST00000393104 PABPC3Q9H361 631 aaKnown RBP12.4□□□□□ -0.42
PDCD4-202ENST00000393104 TRIM33Q9UPN9 1127 aa12.4□□□□□ -0.42
PDCD4-202ENST00000393104 ATP8A1Q9Y2Q0 1164 aa12.4□□□□□ -0.42
PDCD4-202ENST00000393104 C15orf41Q9Y2V0 281 aa12.4□□□□□ -0.42
PDCD4-202ENST00000393104 KRT16P08779 473 aa12.4□□□□□ -0.42
PDCD4-202ENST00000393104 SMARCA1P28370 1054 aa12.4□□□□□ -0.42
PDCD4-202ENST00000393104 PPP4CP60510 307 aa12.4□□□□□ -0.42
PDCD4-202ENST00000393104 ASIC2Q16515 512 aa12.4□□□□□ -0.42
PDCD4-202ENST00000393104 REXO1Q8N1G1 1221 aaKnown RBP12.4□□□□□ -0.42
PDCD4-202ENST00000393104 EPS8L3Q8TE67 593 aaKnown RBP12.4□□□□□ -0.42
PDCD4-202ENST00000393104 SNX29Q8TEQ0 813 aa12.4□□□□□ -0.42
PDCD4-202ENST00000393104 LRRC45Q96CN5 670 aa12.4□□□□□ -0.42
PDCD4-202ENST00000393104 PRMT1Q99873 361 aaKnown RBP12.4□□□□□ -0.42
PDCD4-202ENST00000393104 GGT7Q9UJ14 662 aa12.4□□□□□ -0.42
PDCD4-202ENST00000393104 IGKV6D-41A0A0C4DH26 115 aa12.4□□□□□ -0.43
PDCD4-202ENST00000393104 CCDC188H7C350 402 aa12.4□□□□□ -0.43
PDCD4-202ENST00000393104 ANP32DO95626 131 aa12.4□□□□□ -0.43
PDCD4-202ENST00000393104 GSTA1P08263 222 aa12.4□□□□□ -0.43
PDCD4-202ENST00000393104 RPSAP08865 295 aaKnown RBP12.4□□□□□ -0.43
PDCD4-202ENST00000393104 SPATA31C1P0DKV0 1188 aa12.4□□□□□ -0.43
PDCD4-202ENST00000393104 RPL21P46778 160 aaKnown RBP12.4□□□□□ -0.43
PDCD4-202ENST00000393104 ALDH5A1P51649 535 aaPredicted RBP12.4□□□□□ -0.43
PDCD4-202ENST00000393104 GALCP54803 685 aa12.4□□□□□ -0.43
PDCD4-202ENST00000393104 NPEPPSP55786 919 aa12.4□□□□□ -0.43
PDCD4-202ENST00000393104 AUHQ13825 339 aaKnown RBP12.4□□□□□ -0.43
PDCD4-202ENST00000393104 SLC29A2Q14542 456 aa12.4□□□□□ -0.43
PDCD4-202ENST00000393104 UBE2SQ16763 222 aa12.4□□□□□ -0.43
PDCD4-202ENST00000393104 GKAP1Q5VSY0 366 aaPredicted RBP12.4□□□□□ -0.43
PDCD4-202ENST00000393104 CLEC10AQ8IUN9 316 aa12.4□□□□□ -0.43
PDCD4-202ENST00000393104 ARFGAP2Q8N6H7 521 aa12.4□□□□□ -0.43
PDCD4-202ENST00000393104 C7orf43Q8WVR3 580 aa12.4□□□□□ -0.43
PDCD4-202ENST00000393104 CALML4Q96GE6 196 aa12.4□□□□□ -0.43
PDCD4-202ENST00000393104 COA1Q9GZY4 146 aa12.4□□□□□ -0.43
PDCD4-202ENST00000393104 BCCIPQ9P287 314 aaKnown RBP eCLIP12.4□□□□□ -0.43
PDCD4-202ENST00000393104 PNMA3Q9UL41 463 aa12.4□□□□□ -0.43
PDCD4-202ENST00000393104 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.4□□□□□ -0.43
PDCD4-202ENST00000393104 NUMBLQ9Y6R0 609 aa12.4□□□□□ -0.43
PDCD4-202ENST00000393104 SNX3O60493 162 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 CTNND1O60716 968 aaKnown RBP12.39□□□□□ -0.43
PDCD4-202ENST00000393104 LRRN2O75325 713 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 UBOX5O94941 541 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 FGGP02679 453 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 GM2AP17900 193 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 CCNG1P51959 295 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 GSTO1P78417 241 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 HIBCHQ6NVY1 386 aaPredicted RBP12.39□□□□□ -0.43
PDCD4-202ENST00000393104 RUFY4Q6ZNE9 571 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 EXOC3L1Q86VI1 746 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 PRELID2Q8N945 189 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 ZNF483Q8TF39 744 aaPredicted RBP12.39□□□□□ -0.43
PDCD4-202ENST00000393104 P3H4Q92791 437 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 TBC1D31Q96DN5 1066 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 ERP44Q9BS26 406 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 TMEM109Q9BVC6 243 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 ARHGEF3Q9NR81 526 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 TRPC6Q9Y210 931 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 SMNDC1O75940 238 aaKnown RBP eCLIP12.39□□□□□ -0.43
PDCD4-202ENST00000393104 MMEP08473 750 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 CDK8P49336 464 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 GNAQP50148 359 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 BNIP1Q12981 228 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 EDRF1Q3B7T1 1238 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 KRT71Q3SY84 523 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 NEDD1Q8NHV4 660 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 C18orf8Q96DM3 657 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 POTEB3A0JP26 581 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 FAM170AA1A519 330 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 POTECB2RU33 542 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 RHBDL3P58872 404 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 GIT2Q14161 759 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 C10orf76Q5T2E6 689 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 POTEBQ6S5H4 581 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 FITM2Q8N6M3 262 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 SLC35G2Q8TBE7 412 aa12.39□□□□□ -0.43
PDCD4-202ENST00000393104 CNKSR1Q969H4 720 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms