RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 ATP6V1G2O95670 118 aa16.34■□□□□ 0.21
SHTN1-204ENST00000392903 TMOD1P28289 359 aa16.34■□□□□ 0.21
SHTN1-204ENST00000392903 STAT2P52630 851 aa16.34■□□□□ 0.21
SHTN1-204ENST00000392903 SLC12A3P55017 1021 aa16.34■□□□□ 0.21
SHTN1-204ENST00000392903 UBXN2AP68543 259 aa16.34■□□□□ 0.21
SHTN1-204ENST00000392903 ELF3P78545 371 aaPredicted RBP16.34■□□□□ 0.21
SHTN1-204ENST00000392903 DLGAP5Q15398 846 aa16.34■□□□□ 0.21
SHTN1-204ENST00000392903 C11orf91Q3C1V1 193 aa16.34■□□□□ 0.21
SHTN1-204ENST00000392903 MEI1Q5TIA1 1274 aa16.34■□□□□ 0.21
SHTN1-204ENST00000392903 LARGE2Q8N3Y3 721 aa16.34■□□□□ 0.21
SHTN1-204ENST00000392903 USP38Q8NB14 1042 aa16.34■□□□□ 0.21
SHTN1-204ENST00000392903 SCFD1Q8WVM8 642 aa16.34■□□□□ 0.21
SHTN1-204ENST00000392903 EDEM3Q9BZQ6 932 aa16.34■□□□□ 0.21
SHTN1-204ENST00000392903 EMILIN3Q9NT22 766 aa16.34■□□□□ 0.21
SHTN1-204ENST00000392903 PCDHA2Q9Y5H9 948 aa16.34■□□□□ 0.21
SHTN1-204ENST00000392903 ABCB11O95342 1321 aa16.34■□□□□ 0.21
SHTN1-204ENST00000392903 MSH4O15457 936 aa16.34■□□□□ 0.21
SHTN1-204ENST00000392903 PALMO75781 387 aa16.34■□□□□ 0.21
SHTN1-204ENST00000392903 SPATA31C1P0DKV0 1188 aa16.34■□□□□ 0.21
SHTN1-204ENST00000392903 GBP2P32456 591 aaPredicted RBP16.34■□□□□ 0.21
SHTN1-204ENST00000392903 SREBF1P36956 1147 aa16.34■□□□□ 0.21
SHTN1-204ENST00000392903 ERVK-9P63128 1117 aa16.34■□□□□ 0.21
SHTN1-204ENST00000392903 ZCWPW2Q504Y3 356 aa16.34■□□□□ 0.21
SHTN1-204ENST00000392903 RSBN1LQ6PCB5 846 aaPredicted RBP16.34■□□□□ 0.21
SHTN1-204ENST00000392903 ARHGAP27Q6ZUM4 889 aa16.34■□□□□ 0.21
SHTN1-204ENST00000392903 OGFOD1Q8N543 542 aa16.34■□□□□ 0.21
SHTN1-204ENST00000392903 SUPT20HQ8NEM7 779 aa16.34■□□□□ 0.21
SHTN1-204ENST00000392903 BATF3Q9NR55 127 aa16.34■□□□□ 0.21
SHTN1-204ENST00000392903 ZNF70Q9UC06 446 aaPredicted RBP16.34■□□□□ 0.21
SHTN1-204ENST00000392903 PCDHGC5Q9Y5F6 944 aa16.34■□□□□ 0.21
SHTN1-204ENST00000392903 COL4A3BPQ9Y5P4 624 aa16.34■□□□□ 0.21
SHTN1-204ENST00000392903 BHMG1C9JSJ3 638 aaPredicted RBP16.33■□□□□ 0.2
SHTN1-204ENST00000392903 BRD2P25440 801 aaKnown RBP16.33■□□□□ 0.2
SHTN1-204ENST00000392903 CTNNA1P35221 906 aaKnown RBP16.33■□□□□ 0.2
SHTN1-204ENST00000392903 CASP5P51878 434 aa16.33■□□□□ 0.2
SHTN1-204ENST00000392903 NAB2Q15742 525 aa16.33■□□□□ 0.2
SHTN1-204ENST00000392903 ZKSCAN8Q15776 578 aaPredicted RBP16.33■□□□□ 0.2
SHTN1-204ENST00000392903 HGSNATQ68CP4 663 aa16.33■□□□□ 0.2
SHTN1-204ENST00000392903 PDXDC1Q6P996 788 aa16.33■□□□□ 0.2
SHTN1-204ENST00000392903 CRELD2Q6UXH1 353 aaPredicted RBP16.33■□□□□ 0.2
SHTN1-204ENST00000392903 RSRC1Q96IZ7 334 aaKnown RBP16.33■□□□□ 0.2
SHTN1-204ENST00000392903 BCAS3Q9H6U6 928 aa16.33■□□□□ 0.2
SHTN1-204ENST00000392903 EBF2Q9HAK2 575 aa16.33■□□□□ 0.2
SHTN1-204ENST00000392903 NOD2Q9HC29 1040 aa16.33■□□□□ 0.2
SHTN1-204ENST00000392903 STK32BQ9NY57 414 aa16.33■□□□□ 0.2
SHTN1-204ENST00000392903 CNOT8Q9UFF9 292 aaKnown RBP16.33■□□□□ 0.2
SHTN1-204ENST00000392903 DNM3Q9UQ16 869 aa16.33■□□□□ 0.2
SHTN1-204ENST00000392903 CES2O00748 559 aa16.33■□□□□ 0.2
SHTN1-204ENST00000392903 ECM2O94769 699 aaPredicted RBP16.33■□□□□ 0.2
SHTN1-204ENST00000392903 FOSP01100 380 aaPredicted RBP16.33■□□□□ 0.2
SHTN1-204ENST00000392903 DRD4P21917 467 aa16.33■□□□□ 0.2
SHTN1-204ENST00000392903 HLTFQ14527 1009 aaKnown RBP eCLIP16.33■□□□□ 0.2
SHTN1-204ENST00000392903 Q4G0T1 1027 aa16.33■□□□□ 0.2
SHTN1-204ENST00000392903 MOXD1Q6UVY6 613 aa16.33■□□□□ 0.2
SHTN1-204ENST00000392903 OR2W6PQ8NHA6 318 aa16.33■□□□□ 0.2
SHTN1-204ENST00000392903 TMEM39BQ9GZU3 492 aa16.33■□□□□ 0.2
SHTN1-204ENST00000392903 NLRC4Q9NPP4 1024 aa16.33■□□□□ 0.2
SHTN1-204ENST00000392903 RGL1Q9NZL6 768 aa16.33■□□□□ 0.2
SHTN1-204ENST00000392903 HERC5Q9UII4 1024 aaKnown RBP16.33■□□□□ 0.2
SHTN1-204ENST00000392903 KCNMA1Q12791 1236 aa16.32■□□□□ 0.2
SHTN1-204ENST00000392903 MTMR3Q13615 1198 aa16.32■□□□□ 0.2
SHTN1-204ENST00000392903 NAA25Q14CX7 972 aa16.32■□□□□ 0.2
SHTN1-204ENST00000392903 ODF2Q5BJF6 829 aa16.32■□□□□ 0.2
SHTN1-204ENST00000392903 BTNL9Q6UXG8 535 aa16.32■□□□□ 0.2
SHTN1-204ENST00000392903 ARHGEF10LQ9HCE6 1279 aa16.32■□□□□ 0.2
SHTN1-204ENST00000392903 LUC7LQ9NQ29 371 aaKnown RBP16.32■□□□□ 0.2
SHTN1-204ENST00000392903 EML1O00423 815 aa16.31■□□□□ 0.2
SHTN1-204ENST00000392903 FTCDO95954 541 aa16.31■□□□□ 0.2
SHTN1-204ENST00000392903 RPA1P27694 616 aa16.31■□□□□ 0.2
SHTN1-204ENST00000392903 GRIK3Q13003 919 aa16.31■□□□□ 0.2
SHTN1-204ENST00000392903 RIPK1Q13546 671 aa16.31■□□□□ 0.2
SHTN1-204ENST00000392903 CACNA2D4Q7Z3S7 1137 aa16.31■□□□□ 0.2
SHTN1-204ENST00000392903 CPLX4Q7Z7G2 160 aa16.31■□□□□ 0.2
SHTN1-204ENST00000392903 TTLL6Q8N841 843 aa16.31■□□□□ 0.2
SHTN1-204ENST00000392903 ERMNQ8TAM6 284 aa16.31■□□□□ 0.2
SHTN1-204ENST00000392903 REEP2Q9BRK0 252 aa16.31■□□□□ 0.2
SHTN1-204ENST00000392903 SLC24A3Q9HC58 644 aa16.31■□□□□ 0.2
SHTN1-204ENST00000392903 CHMP2AO43633 222 aa16.31■□□□□ 0.2
SHTN1-204ENST00000392903 GSTA1P08263 222 aa16.31■□□□□ 0.2
SHTN1-204ENST00000392903 ADAM9Q13443 819 aa16.31■□□□□ 0.2
SHTN1-204ENST00000392903 GIT2Q14161 759 aa16.31■□□□□ 0.2
SHTN1-204ENST00000392903 NAIF1Q69YI7 327 aaPredicted RBP16.31■□□□□ 0.2
SHTN1-204ENST00000392903 BHMT2Q9H2M3 363 aa16.31■□□□□ 0.2
SHTN1-204ENST00000392903 KCTD10Q9H3F6 313 aa16.31■□□□□ 0.2
SHTN1-204ENST00000392903 TMX2Q9Y320 296 aa16.31■□□□□ 0.2
SHTN1-204ENST00000392903 FRMD3A2A2Y4 597 aa16.3■□□□□ 0.2
SHTN1-204ENST00000392903 CCT8L1PA6NM43 557 aa16.3■□□□□ 0.2
SHTN1-204ENST00000392903 SFI1A8K8P3 1242 aa16.3■□□□□ 0.2
SHTN1-204ENST00000392903 RSPH10B2B2RC85 870 aa16.3■□□□□ 0.2
SHTN1-204ENST00000392903 PPP1R12BO60237 982 aaPredicted RBP16.3■□□□□ 0.2
SHTN1-204ENST00000392903 RPSAP08865 295 aaKnown RBP16.3■□□□□ 0.2
SHTN1-204ENST00000392903 RSPH10BP0C881 870 aa16.3■□□□□ 0.2
SHTN1-204ENST00000392903 KLHL7Q8IXQ5 586 aa16.3■□□□□ 0.2
SHTN1-204ENST00000392903 PIGOQ8TEQ8 1089 aa16.3■□□□□ 0.2
SHTN1-204ENST00000392903 FAM151AQ8WW52 585 aa16.3■□□□□ 0.2
SHTN1-204ENST00000392903 SYN2Q92777 582 aaPredicted RBP16.3■□□□□ 0.2
SHTN1-204ENST00000392903 CENPTQ96BT3 561 aa16.3■□□□□ 0.2
SHTN1-204ENST00000392903 GLIS2Q9BZE0 524 aaPredicted RBP16.3■□□□□ 0.2
SHTN1-204ENST00000392903 CNOT10Q9H9A5 744 aaKnown RBP16.3■□□□□ 0.2
SHTN1-204ENST00000392903 ZBTB21Q9ULJ3 1066 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms