RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 RIT2Q99578 217 aa13.4□□□□□ -0.26
RFC5-201ENST00000392542 MXRA8Q9BRK3 442 aa13.4□□□□□ -0.26
RFC5-201ENST00000392542 STRA6Q9BX79 667 aa13.4□□□□□ -0.26
RFC5-201ENST00000392542 DEFB129Q9H1M3 183 aa13.4□□□□□ -0.26
RFC5-201ENST00000392542 FAM153AQ9UHL3 310 aa13.4□□□□□ -0.26
RFC5-201ENST00000392542 DAAM1Q9Y4D1 1078 aa13.4□□□□□ -0.26
RFC5-201ENST00000392542 PGRMC1O00264 195 aaKnown RBP13.4□□□□□ -0.26
RFC5-201ENST00000392542 IPO5O00410 1097 aaKnown RBP13.4□□□□□ -0.26
RFC5-201ENST00000392542 TBC1D12O60347 775 aa13.4□□□□□ -0.26
RFC5-201ENST00000392542 PPP1R37O75864 691 aa13.4□□□□□ -0.26
RFC5-201ENST00000392542 LMNB1P20700 586 aa13.4□□□□□ -0.26
RFC5-201ENST00000392542 DRAP1Q14919 205 aaPredicted RBP13.4□□□□□ -0.26
RFC5-201ENST00000392542 CBWD6Q4V339 395 aa13.4□□□□□ -0.26
RFC5-201ENST00000392542 CBWD3Q5JTY5 395 aa13.4□□□□□ -0.26
RFC5-201ENST00000392542 CBWD5Q5RIA9 395 aa13.4□□□□□ -0.26
RFC5-201ENST00000392542 FOXR1Q6PIV2 292 aa13.4□□□□□ -0.26
RFC5-201ENST00000392542 PEX26Q7Z412 305 aa13.4□□□□□ -0.26
RFC5-201ENST00000392542 SLC9A9Q8IVB4 645 aa13.4□□□□□ -0.26
RFC5-201ENST00000392542 KLHL7Q8IXQ5 586 aa13.4□□□□□ -0.26
RFC5-201ENST00000392542 METTL13Q8N6R0 699 aa13.4□□□□□ -0.26
RFC5-201ENST00000392542 WHAMMQ8TF30 809 aa13.4□□□□□ -0.26
RFC5-201ENST00000392542 INTS2Q9H0H0 1204 aaKnown RBP13.4□□□□□ -0.26
RFC5-201ENST00000392542 PLEKHA4Q9H4M7 779 aa13.4□□□□□ -0.26
RFC5-201ENST00000392542 FBXO28Q9NVF7 368 aa13.4□□□□□ -0.26
RFC5-201ENST00000392542 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.4□□□□□ -0.26
RFC5-201ENST00000392542 SUCLA2Q9P2R7 463 aaPredicted RBP13.4□□□□□ -0.26
RFC5-201ENST00000392542 NCANO14594 1321 aa13.39□□□□□ -0.27
RFC5-201ENST00000392542 HIP1RO75146 1068 aa13.39□□□□□ -0.27
RFC5-201ENST00000392542 RAD17O75943 681 aa13.39□□□□□ -0.27
RFC5-201ENST00000392542 TRIM49P0CI25 452 aa13.39□□□□□ -0.27
RFC5-201ENST00000392542 TRIM49CP0CI26 452 aa13.39□□□□□ -0.27
RFC5-201ENST00000392542 GALCP54803 685 aa13.39□□□□□ -0.27
RFC5-201ENST00000392542 MAPK7Q13164 816 aa13.39□□□□□ -0.27
RFC5-201ENST00000392542 TTMPQ5BVD1 217 aa13.39□□□□□ -0.27
RFC5-201ENST00000392542 CFAP58Q5T655 872 aa13.39□□□□□ -0.27
RFC5-201ENST00000392542 SAMD1Q6SPF0 538 aaPredicted RBP13.39□□□□□ -0.27
RFC5-201ENST00000392542 FMNL3Q8IVF7 1028 aa13.39□□□□□ -0.27
RFC5-201ENST00000392542 BANK1Q8NDB2 785 aa13.39□□□□□ -0.27
RFC5-201ENST00000392542 ARL8AQ96BM9 186 aa13.39□□□□□ -0.27
RFC5-201ENST00000392542 CCDC43Q96MW1 224 aaKnown RBP13.39□□□□□ -0.27
RFC5-201ENST00000392542 TRERF1Q96PN7 1200 aa13.39□□□□□ -0.27
RFC5-201ENST00000392542 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.39□□□□□ -0.273e-11■■□□□ 12.8
RFC5-201ENST00000392542 GPR88Q9GZN0 384 aa13.39□□□□□ -0.27
RFC5-201ENST00000392542 VEZTQ9HBM0 779 aa13.39□□□□□ -0.27
RFC5-201ENST00000392542 TMCO5BA8MYB1 307 aa13.39□□□□□ -0.27
RFC5-201ENST00000392542 PPFIA4O75335 1185 aa13.39□□□□□ -0.27
RFC5-201ENST00000392542 CAP2P40123 477 aa13.39□□□□□ -0.27
RFC5-201ENST00000392542 HSD17B4P51659 736 aa13.39□□□□□ -0.27
RFC5-201ENST00000392542 MYL7Q01449 175 aa13.39□□□□□ -0.27
RFC5-201ENST00000392542 MYBPC2Q14324 1141 aa13.39□□□□□ -0.27
RFC5-201ENST00000392542 FKBP1CQ5VVH2 108 aa13.39□□□□□ -0.27
RFC5-201ENST00000392542 SRLQ86TD4 932 aa13.39□□□□□ -0.27
RFC5-201ENST00000392542 IQCKQ8N0W5 287 aa13.39□□□□□ -0.27
RFC5-201ENST00000392542 DAW1Q8N136 415 aa13.39□□□□□ -0.27
RFC5-201ENST00000392542 RASGEF1CQ8N431 466 aa13.39□□□□□ -0.27
RFC5-201ENST00000392542 EIF1ADQ8N9N8 165 aaKnown RBP13.39□□□□□ -0.27
RFC5-201ENST00000392542 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.39□□□□□ -0.27
RFC5-201ENST00000392542 SYT11Q9BT88 431 aa13.39□□□□□ -0.27
RFC5-201ENST00000392542 APEX2Q9UBZ4 518 aa13.39□□□□□ -0.27
RFC5-201ENST00000392542 NOC2LQ9Y3T9 749 aaKnown RBP13.39□□□□□ -0.27
RFC5-201ENST00000392542 EXOC3O60645 756 aa13.38□□□□□ -0.27
RFC5-201ENST00000392542 CCDC172P0C7W6 258 aa13.38□□□□□ -0.27
RFC5-201ENST00000392542 BCRP11274 1271 aa13.38□□□□□ -0.27
RFC5-201ENST00000392542 BFSP1Q12934 665 aa13.38□□□□□ -0.27
RFC5-201ENST00000392542 SF3B2Q13435 895 aaKnown RBP13.38□□□□□ -0.27
RFC5-201ENST00000392542 PTPROQ16827 1216 aa13.38□□□□□ -0.27
RFC5-201ENST00000392542 MIER3Q7Z3K6 550 aa13.38□□□□□ -0.27
RFC5-201ENST00000392542 DAAM2Q86T65 1068 aa13.38□□□□□ -0.27
RFC5-201ENST00000392542 NT5DC3Q86UY8 548 aa13.38□□□□□ -0.27
RFC5-201ENST00000392542 GLYCTKQ8IVS8 523 aa13.38□□□□□ -0.27
RFC5-201ENST00000392542 CDAN1Q8IWY9 1227 aa13.38□□□□□ -0.27
RFC5-201ENST00000392542 SYCP3Q8IZU3 236 aa13.38□□□□□ -0.27
RFC5-201ENST00000392542 OGFOD1Q8N543 542 aa13.38□□□□□ -0.27
RFC5-201ENST00000392542 ISCUQ9H1K1 167 aa13.38□□□□□ -0.27
RFC5-201ENST00000392542 TAF1DQ9H5J8 278 aaPredicted RBP13.38□□□□□ -0.27
RFC5-201ENST00000392542 TNS1Q9HBL0 1735 aaKnown RBP13.38□□□□□ -0.27
RFC5-201ENST00000392542 RGPD3A6NKT7 1758 aaPredicted RBP13.38□□□□□ -0.27
RFC5-201ENST00000392542 RGPD4Q7Z3J3 1758 aa13.38□□□□□ -0.27
RFC5-201ENST00000392542 RPTORQ8N122 1335 aa13.38□□□□□ -0.27
RFC5-201ENST00000392542 CCDC188H7C350 402 aa13.38□□□□□ -0.27
RFC5-201ENST00000392542 DDX39AO00148 427 aaKnown RBP13.38□□□□□ -0.27
RFC5-201ENST00000392542 TMEM253P0C7T8 217 aa13.38□□□□□ -0.27
RFC5-201ENST00000392542 ITGB5P18084 799 aa13.38□□□□□ -0.27
RFC5-201ENST00000392542 PTGER2P43116 358 aa13.38□□□□□ -0.27
RFC5-201ENST00000392542 GUCY2FP51841 1108 aa13.38□□□□□ -0.27
RFC5-201ENST00000392542 ERVK-9P63128 1117 aa13.38□□□□□ -0.27
RFC5-201ENST00000392542 PADI6Q6TGC4 694 aa13.38□□□□□ -0.27
RFC5-201ENST00000392542 CD302Q8IX05 232 aa13.38□□□□□ -0.27
RFC5-201ENST00000392542 GLIS2Q9BZE0 524 aaPredicted RBP13.38□□□□□ -0.27
RFC5-201ENST00000392542 TMEM39BQ9GZU3 492 aa13.38□□□□□ -0.27
RFC5-201ENST00000392542 CCPG1Q9ULG6 757 aa13.38□□□□□ -0.27
RFC5-201ENST00000392542 RRP15Q9Y3B9 282 aaKnown RBP13.38□□□□□ -0.27
RFC5-201ENST00000392542 BHMG1C9JSJ3 638 aaPredicted RBP13.37□□□□□ -0.27
RFC5-201ENST00000392542 K7ENM7 598 aa13.37□□□□□ -0.27
RFC5-201ENST00000392542 ICAM1P05362 532 aa13.37□□□□□ -0.27
RFC5-201ENST00000392542 RFX1P22670 979 aa13.37□□□□□ -0.27
RFC5-201ENST00000392542 TRADDQ15628 312 aa13.37□□□□□ -0.27
RFC5-201ENST00000392542 GRIPAP1Q4V328 841 aa13.37□□□□□ -0.27
RFC5-201ENST00000392542 MIGA2Q7L4E1 593 aa13.37□□□□□ -0.27
RFC5-201ENST00000392542 RFFLQ8WZ73 363 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms