RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 HAUS3Q68CZ6 603 aa20.73■□□□□ 0.91
CCDC50-202ENST00000392456 B4GALNT4Q76KP1 1039 aa20.73■□□□□ 0.91
CCDC50-202ENST00000392456 DNAJC19Q96DA6 116 aa20.73■□□□□ 0.91
CCDC50-202ENST00000392456 POLD4Q9HCU8 107 aa20.73■□□□□ 0.91
CCDC50-202ENST00000392456 RBBP6Q7Z6E9 1792 aaKnown RBP20.73■□□□□ 0.91
CCDC50-202ENST00000392456 PES1O00541 588 aaKnown RBP20.73■□□□□ 0.91
CCDC50-202ENST00000392456 ZSCAN12O43309 604 aa20.73■□□□□ 0.91
CCDC50-202ENST00000392456 GNG11P61952 73 aa20.73■□□□□ 0.91
CCDC50-202ENST00000392456 AMPD3Q01432 767 aa20.73■□□□□ 0.91
CCDC50-202ENST00000392456 PDE4DQ08499 809 aa20.73■□□□□ 0.91
CCDC50-202ENST00000392456 ARSHQ5FYA8 562 aa20.73■□□□□ 0.91
CCDC50-202ENST00000392456 TPH2Q8IWU9 490 aa20.73■□□□□ 0.91
CCDC50-202ENST00000392456 CHST13Q8NET6 341 aa20.73■□□□□ 0.91
CCDC50-202ENST00000392456 ERMNQ8TAM6 284 aa20.73■□□□□ 0.91
CCDC50-202ENST00000392456 ENOX1Q8TC92 643 aaKnown RBP20.73■□□□□ 0.91
CCDC50-202ENST00000392456 NSUN6Q8TEA1 469 aaKnown RBP20.73■□□□□ 0.91
CCDC50-202ENST00000392456 PIGOQ8TEQ8 1089 aa20.73■□□□□ 0.91
CCDC50-202ENST00000392456 CTNND2Q9UQB3 1225 aa20.73■□□□□ 0.91
CCDC50-202ENST00000392456 TELO2Q9Y4R8 837 aa20.73■□□□□ 0.91
CCDC50-202ENST00000392456 GRIN2DO15399 1336 aa20.73■□□□□ 0.91
CCDC50-202ENST00000392456 A0A0G2JMZ2 1700 aa20.73■□□□□ 0.91
CCDC50-202ENST00000392456 EIF3HO15372 352 aaKnown RBP eCLIP20.72■□□□□ 0.91
CCDC50-202ENST00000392456 ERCC5P28715 1186 aaPredicted RBP20.72■□□□□ 0.91
CCDC50-202ENST00000392456 LAMB3Q13751 1172 aa20.72■□□□□ 0.91
CCDC50-202ENST00000392456 SPATS2Q86XZ4 545 aaKnown RBP20.72■□□□□ 0.91
CCDC50-202ENST00000392456 C2orf69Q8N8R5 385 aa20.72■□□□□ 0.91
CCDC50-202ENST00000392456 GLIS3Q8NEA6 775 aa20.72■□□□□ 0.91
CCDC50-202ENST00000392456 BRI3BPQ8WY22 251 aa20.72■□□□□ 0.91
CCDC50-202ENST00000392456 RMND1Q9NWS8 449 aa20.72■□□□□ 0.91
CCDC50-202ENST00000392456 G3BP2Q9UN86 482 aaKnown RBP20.72■□□□□ 0.91
CCDC50-202ENST00000392456 LCTP09848 1927 aa20.72■□□□□ 0.91
CCDC50-202ENST00000392456 FESP07332 822 aa20.72■□□□□ 0.91
CCDC50-202ENST00000392456 PMS1P54277 932 aaKnown RBP20.72■□□□□ 0.91
CCDC50-202ENST00000392456 SLC12A3P55017 1021 aa20.72■□□□□ 0.91
CCDC50-202ENST00000392456 VSNL1P62760 191 aa20.72■□□□□ 0.91
CCDC50-202ENST00000392456 NIPA1Q7RTP0 329 aa20.72■□□□□ 0.91
CCDC50-202ENST00000392456 GIMAP8Q8ND71 665 aaPredicted RBP20.72■□□□□ 0.91
CCDC50-202ENST00000392456 TEKT3Q9BXF9 490 aa20.72■□□□□ 0.91
CCDC50-202ENST00000392456 SLC40A1Q9NP59 571 aa20.72■□□□□ 0.91
CCDC50-202ENST00000392456 DACH1Q9UI36 760 aa20.72■□□□□ 0.91
CCDC50-202ENST00000392456 BTBD19C9JJ37 291 aa20.71■□□□□ 0.91
CCDC50-202ENST00000392456 AHCYL1O43865 530 aa20.71■□□□□ 0.91
CCDC50-202ENST00000392456 IDEP14735 1019 aa20.71■□□□□ 0.91
CCDC50-202ENST00000392456 PTPN21Q16825 1174 aa20.71■□□□□ 0.91
CCDC50-202ENST00000392456 CCDC50Q8IVM0 306 aa20.71■□□□□ 0.91
CCDC50-202ENST00000392456 KIAA0895Q8NCT3 520 aa20.71■□□□□ 0.91
CCDC50-202ENST00000392456 RIT2Q99578 217 aa20.71■□□□□ 0.91
CCDC50-202ENST00000392456 POLR3CQ9BUI4 534 aaPredicted RBP20.71■□□□□ 0.91
CCDC50-202ENST00000392456 SLC39A2Q9NP94 309 aa20.71■□□□□ 0.91
CCDC50-202ENST00000392456 SAMM50Q9Y512 469 aa20.71■□□□□ 0.91
CCDC50-202ENST00000392456 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.71■□□□□ 0.91
CCDC50-202ENST00000392456 CYP11B2P19099 503 aa20.71■□□□□ 0.91
CCDC50-202ENST00000392456 MYLK4Q86YV6 388 aaPredicted RBP20.71■□□□□ 0.91
CCDC50-202ENST00000392456 ADSSL1Q8N142 457 aa20.71■□□□□ 0.91
CCDC50-202ENST00000392456 ZSWIM4Q9H7M6 989 aa20.71■□□□□ 0.91
CCDC50-202ENST00000392456 CCL15-CCL14A0A0B4J2E2 113 aa20.7■□□□□ 0.9
CCDC50-202ENST00000392456 TRIM49BA6NDI0 452 aa20.7■□□□□ 0.9
CCDC50-202ENST00000392456 ZEB2O60315 1214 aa20.7■□□□□ 0.9
CCDC50-202ENST00000392456 CCND2P30279 289 aa20.7■□□□□ 0.9
CCDC50-202ENST00000392456 CCL15Q16663 113 aa20.7■□□□□ 0.9
CCDC50-202ENST00000392456 YTHDF3Q7Z739 585 aaKnown RBP20.7■□□□□ 0.9
CCDC50-202ENST00000392456 GPBP1Q86WP2 473 aa20.7■□□□□ 0.9
CCDC50-202ENST00000392456 B4GALNT2Q8NHY0 566 aa20.7■□□□□ 0.9
CCDC50-202ENST00000392456 RSRC1Q96IZ7 334 aaKnown RBP20.7■□□□□ 0.9
CCDC50-202ENST00000392456 BHMT2Q9H2M3 363 aa20.7■□□□□ 0.9
CCDC50-202ENST00000392456 CENPHQ9H3R5 247 aa20.7■□□□□ 0.9
CCDC50-202ENST00000392456 EXOC1Q9NV70 894 aa20.7■□□□□ 0.9
CCDC50-202ENST00000392456 DNM3Q9UQ16 869 aa20.7■□□□□ 0.9
CCDC50-202ENST00000392456 PDHXO00330 501 aa20.7■□□□□ 0.9
CCDC50-202ENST00000392456 SORBS3O60504 671 aa20.7■□□□□ 0.9
CCDC50-202ENST00000392456 PGK2P07205 417 aa20.7■□□□□ 0.9
CCDC50-202ENST00000392456 RPSAP08865 295 aaKnown RBP20.7■□□□□ 0.9
CCDC50-202ENST00000392456 ZNF18P17022 549 aa20.7■□□□□ 0.9
CCDC50-202ENST00000392456 OSBPP22059 807 aa20.7■□□□□ 0.9
CCDC50-202ENST00000392456 FKBP1BP68106 108 aa20.7■□□□□ 0.9
CCDC50-202ENST00000392456 FANCCQ00597 558 aa20.7■□□□□ 0.9
CCDC50-202ENST00000392456 CAPRIN2Q6IMN6 1127 aaKnown RBP20.7■□□□□ 0.9
CCDC50-202ENST00000392456 MFN1Q8IWA4 741 aa20.7■□□□□ 0.9
CCDC50-202ENST00000392456 NELFBQ8WX92 580 aa20.7■□□□□ 0.9
CCDC50-202ENST00000392456 INPP4AQ96PE3 977 aaPredicted RBP20.7■□□□□ 0.9
CCDC50-202ENST00000392456 PTPN18Q99952 460 aa20.7■□□□□ 0.9
CCDC50-202ENST00000392456 CENPFP49454 3210 aa20.7■□□□□ 0.9
CCDC50-202ENST00000392456 SOWAHBA6NEL2 793 aa20.69■□□□□ 0.9
CCDC50-202ENST00000392456 PPFIA1Q13136 1202 aa20.69■□□□□ 0.9
CCDC50-202ENST00000392456 SPRYD7Q5W111 196 aa20.69■□□□□ 0.9
CCDC50-202ENST00000392456 CWF19L1Q69YN2 538 aaKnown RBP20.69■□□□□ 0.9
CCDC50-202ENST00000392456 MIS18BP1Q6P0N0 1132 aa20.69■□□□□ 0.9
CCDC50-202ENST00000392456 UNC13DQ70J99 1090 aa20.69■□□□□ 0.9
CCDC50-202ENST00000392456 PARP9Q8IXQ6 854 aa20.69■□□□□ 0.9
CCDC50-202ENST00000392456 FGFBP2Q9BYJ0 223 aa20.69■□□□□ 0.9
CCDC50-202ENST00000392456 PORCNQ9H237 461 aa20.69■□□□□ 0.9
CCDC50-202ENST00000392456 SYNRGQ9UMZ2 1314 aa20.69■□□□□ 0.9
CCDC50-202ENST00000392456 CCNE2O96020 404 aa20.69■□□□□ 0.9
CCDC50-202ENST00000392456 FAM76AQ8TAV0 307 aa20.69■□□□□ 0.9
CCDC50-202ENST00000392456 EEF2KMTQ96G04 330 aa20.69■□□□□ 0.9
CCDC50-202ENST00000392456 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.69■□□□□ 0.9
CCDC50-202ENST00000392456 PPP2R2CQ9Y2T4 447 aa20.69■□□□□ 0.9
CCDC50-202ENST00000392456 UNCXA6NJT0 531 aa20.68■□□□□ 0.9
CCDC50-202ENST00000392456 OATP04181 439 aa20.68■□□□□ 0.9
CCDC50-202ENST00000392456 CDR1P51861 262 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms