RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 GRB10Q13322 594 aa12.75□□□□□ -0.37
IGHV4-28-201ENST00000390612 CTTNQ14247 550 aaKnown RBP12.75□□□□□ -0.37
IGHV4-28-201ENST00000390612 ZNF174Q15697 407 aa12.75□□□□□ -0.37
IGHV4-28-201ENST00000390612 TTC38Q5R3I4 469 aa12.75□□□□□ -0.37
IGHV4-28-201ENST00000390612 NPAS4Q8IUM7 802 aa12.75□□□□□ -0.37
IGHV4-28-201ENST00000390612 SLC17A8Q8NDX2 589 aa12.75□□□□□ -0.37
IGHV4-28-201ENST00000390612 CLP1Q92989 425 aaKnown RBP12.75□□□□□ -0.37
IGHV4-28-201ENST00000390612 SAMD11Q96NU1 681 aa12.75□□□□□ -0.37
IGHV4-28-201ENST00000390612 PPP1R16BQ96T49 567 aa12.75□□□□□ -0.37
IGHV4-28-201ENST00000390612 YME1L1Q96TA2 773 aa12.75□□□□□ -0.37
IGHV4-28-201ENST00000390612 ADAM2Q99965 735 aa12.75□□□□□ -0.37
IGHV4-28-201ENST00000390612 JPH2Q9BR39 696 aaPredicted RBP12.75□□□□□ -0.37
IGHV4-28-201ENST00000390612 ANKEF1Q9NU02 776 aa12.75□□□□□ -0.37
IGHV4-28-201ENST00000390612 LMCD1Q9NZU5 365 aa12.75□□□□□ -0.37
IGHV4-28-201ENST00000390612 KIF3AQ9Y496 699 aa12.75□□□□□ -0.37
IGHV4-28-201ENST00000390612 MUC3AQ02505 3323 aa12.74□□□□□ -0.37
IGHV4-28-201ENST00000390612 ADGRA3Q8IWK6 1321 aa12.74□□□□□ -0.37
IGHV4-28-201ENST00000390612 OR52Z1P0C646 297 aa12.74□□□□□ -0.37
IGHV4-28-201ENST00000390612 GJB2P29033 226 aa12.74□□□□□ -0.37
IGHV4-28-201ENST00000390612 RFC5P40937 340 aa12.74□□□□□ -0.37
IGHV4-28-201ENST00000390612 SARSP49591 514 aaKnown RBP12.74□□□□□ -0.37
IGHV4-28-201ENST00000390612 DNM2P50570 870 aa12.74□□□□□ -0.37
IGHV4-28-201ENST00000390612 CYP4A11Q02928 519 aa12.74□□□□□ -0.37
IGHV4-28-201ENST00000390612 SLC24A5Q71RS6 500 aa12.74□□□□□ -0.37
IGHV4-28-201ENST00000390612 OTUD6AQ7L8S5 288 aa12.74□□□□□ -0.37
IGHV4-28-201ENST00000390612 ZNF410Q86VK4 478 aa12.74□□□□□ -0.37
IGHV4-28-201ENST00000390612 TPH2Q8IWU9 490 aa12.74□□□□□ -0.37
IGHV4-28-201ENST00000390612 EXOC8Q8IYI6 725 aa12.74□□□□□ -0.37
IGHV4-28-201ENST00000390612 CEP170P1Q96L14 293 aa12.74□□□□□ -0.37
IGHV4-28-201ENST00000390612 C17orf80Q9BSJ5 609 aa12.74□□□□□ -0.37
IGHV4-28-201ENST00000390612 XPNPEP1Q9NQW7 623 aa12.74□□□□□ -0.37
IGHV4-28-201ENST00000390612 C1orf112Q9NSG2 853 aa12.74□□□□□ -0.37
IGHV4-28-201ENST00000390612 SUCLA2Q9P2R7 463 aaPredicted RBP12.74□□□□□ -0.37
IGHV4-28-201ENST00000390612 POTEMA6NI47 508 aa12.73□□□□□ -0.37
IGHV4-28-201ENST00000390612 C5orf67F2Z3F1 127 aa12.73□□□□□ -0.37
IGHV4-28-201ENST00000390612 GAS2O43903 313 aaKnown RBP12.73□□□□□ -0.37
IGHV4-28-201ENST00000390612 IGFBP4P22692 258 aa12.73□□□□□ -0.37
IGHV4-28-201ENST00000390612 FXR2P51116 673 aaKnown RBP eCLIP12.73□□□□□ -0.37
IGHV4-28-201ENST00000390612 NBR1Q14596 966 aa12.73□□□□□ -0.37
IGHV4-28-201ENST00000390612 EPC2Q52LR7 807 aa12.73□□□□□ -0.37
IGHV4-28-201ENST00000390612 CATSPER3Q86XQ3 398 aa12.73□□□□□ -0.37
IGHV4-28-201ENST00000390612 TMEM192Q8IY95 271 aa12.73□□□□□ -0.37
IGHV4-28-201ENST00000390612 CMTR2Q8IYT2 770 aaKnown RBP12.73□□□□□ -0.37
IGHV4-28-201ENST00000390612 PRPF31Q8WWY3 499 aaKnown RBP12.73□□□□□ -0.37
IGHV4-28-201ENST00000390612 ZNF668Q96K58 619 aaPredicted RBP12.73□□□□□ -0.37
IGHV4-28-201ENST00000390612 POLR3CQ9BUI4 534 aaPredicted RBP12.73□□□□□ -0.37
IGHV4-28-201ENST00000390612 ELAC1Q9H777 363 aaKnown RBP12.73□□□□□ -0.37
IGHV4-28-201ENST00000390612 IFT122Q9HBG6 1241 aa12.73□□□□□ -0.37
IGHV4-28-201ENST00000390612 TUFT1Q9NNX1 390 aa12.73□□□□□ -0.37
IGHV4-28-201ENST00000390612 NOL7Q9UMY1 257 aaKnown RBP12.73□□□□□ -0.37
IGHV4-28-201ENST00000390612 PCDHB6Q9Y5E3 794 aa12.73□□□□□ -0.37
IGHV4-28-201ENST00000390612 GTF3C3Q9Y5Q9 886 aa12.73□□□□□ -0.37
IGHV4-28-201ENST00000390612 PLXNA4Q9HCM2 1894 aa12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 A0A087WZ62 844 aa12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 H3BNC9 293 aa12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 MED24O75448 989 aa12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 RB1P06400 928 aa12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 STAG3L1P0CL83 205 aa12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 RPA1P27694 616 aa12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 BMPR1AP36894 532 aa12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 TECP42680 631 aa12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 RARRES1P49788 294 aa12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 PTGDRQ13258 359 aa12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 PDIA5Q14554 519 aa12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 XKR9Q5GH70 373 aa12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 KSR1Q8IVT5 923 aa12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 FIBCD1Q8N539 461 aa12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 FBXO22Q8NEZ5 403 aa12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 GDPD5Q8WTR4 605 aa12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 SLC7A3Q8WY07 619 aa12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 TMEM143Q96AN5 459 aa12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 FDXACB1Q9BRP7 624 aaPredicted RBP12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 TRAIPQ9BWF2 469 aa12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 GCOM2Q9BZD3 368 aaPredicted RBP12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 RNF19AQ9NV58 838 aa12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 SMC3Q9UQE7 1217 aa12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 COL4A3BPQ9Y5P4 624 aa12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 MYH11P35749 1972 aa12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 TCF20Q9UGU0 1960 aaKnown RBP12.72□□□□□ -0.37
IGHV4-28-201ENST00000390612 DENND3A2RUS2 1198 aa12.71□□□□□ -0.37
IGHV4-28-201ENST00000390612 ASAP2O43150 1006 aa12.71□□□□□ -0.37
IGHV4-28-201ENST00000390612 GTPBP6O43824 516 aaPredicted RBP12.71□□□□□ -0.37
IGHV4-28-201ENST00000390612 CSDE1O75534 798 aaKnown RBP12.71□□□□□ -0.37
IGHV4-28-201ENST00000390612 MUTP22033 750 aa12.71□□□□□ -0.37
IGHV4-28-201ENST00000390612 FGFR4P22455 802 aa12.71□□□□□ -0.37
IGHV4-28-201ENST00000390612 PRPHP41219 470 aa12.71□□□□□ -0.37
IGHV4-28-201ENST00000390612 GATMP50440 423 aa12.71□□□□□ -0.37
IGHV4-28-201ENST00000390612 POLGP54098 1239 aaPredicted RBP12.71□□□□□ -0.37
IGHV4-28-201ENST00000390612 POU5F1BQ06416 359 aa12.71□□□□□ -0.37
IGHV4-28-201ENST00000390612 GNL2Q13823 731 aaKnown RBP12.71□□□□□ -0.37
IGHV4-28-201ENST00000390612 EMC2Q15006 297 aa12.71□□□□□ -0.37
IGHV4-28-201ENST00000390612 IL17AQ16552 155 aa12.71□□□□□ -0.37
IGHV4-28-201ENST00000390612 ZNF598Q86UK7 904 aaKnown RBP12.71□□□□□ -0.37
IGHV4-28-201ENST00000390612 FERMT3Q86UX7 667 aa12.71□□□□□ -0.37
IGHV4-28-201ENST00000390612 IFNLR1Q8IU57 520 aaPredicted RBP12.71□□□□□ -0.37
IGHV4-28-201ENST00000390612 RHPN2Q8IUC4 686 aa12.71□□□□□ -0.37
IGHV4-28-201ENST00000390612 IGSF22Q8N9C0 903 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms