RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 CCDC105Q8IYK2 499 aa13.45□□□□□ -0.26
SOD1-202ENST00000389995 KIAA2013Q8IYS2 634 aa13.45□□□□□ -0.26
SOD1-202ENST00000389995 ABI1Q8IZP0 508 aa13.45□□□□□ -0.26
SOD1-202ENST00000389995 LRRC43Q8N309 656 aa13.45□□□□□ -0.26
SOD1-202ENST00000389995 HELQQ8TDG4 1101 aa13.45□□□□□ -0.26
SOD1-202ENST00000389995 ELAC1Q9H777 363 aaKnown RBP13.45□□□□□ -0.26
SOD1-202ENST00000389995 R4GN57 208 aa13.45□□□□□ -0.26
SOD1-202ENST00000389995 IGKV6D-21A0A0A0MT36 114 aa13.44□□□□□ -0.26
SOD1-202ENST00000389995 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.44□□□□□ -0.26
SOD1-202ENST00000389995 NARSO43776 548 aaKnown RBP13.44□□□□□ -0.26
SOD1-202ENST00000389995 C22orf31O95567 290 aa13.44□□□□□ -0.26
SOD1-202ENST00000389995 EOMESO95936 686 aa13.44□□□□□ -0.26
SOD1-202ENST00000389995 FGFR4P22455 802 aa13.44□□□□□ -0.26
SOD1-202ENST00000389995 KIF5BP33176 963 aa13.44□□□□□ -0.26
SOD1-202ENST00000389995 PPM1AP35813 382 aa13.44□□□□□ -0.26
SOD1-202ENST00000389995 CLCN3P51790 818 aa13.44□□□□□ -0.26
SOD1-202ENST00000389995 NUCB1Q02818 461 aa13.44□□□□□ -0.26
SOD1-202ENST00000389995 LONRF3Q496Y0 759 aa13.44□□□□□ -0.26
SOD1-202ENST00000389995 ATAT1Q5SQI0 421 aa13.44□□□□□ -0.26
SOD1-202ENST00000389995 SWSAP1Q6NVH7 229 aa13.44□□□□□ -0.26
SOD1-202ENST00000389995 PDXDC2PQ6P474 469 aa13.44□□□□□ -0.26
SOD1-202ENST00000389995 ABHD15Q6UXT9 468 aa13.44□□□□□ -0.26
SOD1-202ENST00000389995 ECHDC2Q86YB7 292 aa13.44□□□□□ -0.26
SOD1-202ENST00000389995 SIX5Q8N196 739 aa13.44□□□□□ -0.26
SOD1-202ENST00000389995 DTWD2Q8NBA8 298 aa13.44□□□□□ -0.26
SOD1-202ENST00000389995 RIN2Q8WYP3 895 aaPredicted RBP13.44□□□□□ -0.26
SOD1-202ENST00000389995 MTCL1Q9Y4B5 1905 aaKnown RBP13.44□□□□□ -0.26
SOD1-202ENST00000389995 GPR179Q6PRD1 2367 aa13.44□□□□□ -0.26
SOD1-202ENST00000389995 MAP1BP46821 2468 aaKnown RBP13.44□□□□□ -0.26
SOD1-202ENST00000389995 KRT37O76014 449 aa13.43□□□□□ -0.26
SOD1-202ENST00000389995 DDAH1O94760 285 aa13.43□□□□□ -0.26
SOD1-202ENST00000389995 SMARCA1P28370 1054 aa13.43□□□□□ -0.26
SOD1-202ENST00000389995 BCAR1P56945 870 aa13.43□□□□□ -0.26
SOD1-202ENST00000389995 ZNF484Q5JVG2 852 aa13.43□□□□□ -0.26
SOD1-202ENST00000389995 ODR4Q5SWX8 454 aa13.43□□□□□ -0.26
SOD1-202ENST00000389995 FAM160B1Q5W0V3 765 aa13.43□□□□□ -0.26
SOD1-202ENST00000389995 TYW1BQ6NUM6 668 aa13.43□□□□□ -0.26
SOD1-202ENST00000389995 NFXL1Q6ZNB6 911 aa13.43□□□□□ -0.26
SOD1-202ENST00000389995 CKAP2LQ8IYA6 745 aa13.43□□□□□ -0.26
SOD1-202ENST00000389995 VPS52Q8N1B4 723 aa13.43□□□□□ -0.26
SOD1-202ENST00000389995 MAP3K14Q99558 947 aa13.43□□□□□ -0.26
SOD1-202ENST00000389995 ZNF302Q9NR11 478 aa13.43□□□□□ -0.26
SOD1-202ENST00000389995 CYP26B1Q9NR63 512 aa13.43□□□□□ -0.26
SOD1-202ENST00000389995 FBXL21Q9UKT6 434 aa13.43□□□□□ -0.26
SOD1-202ENST00000389995 COL1A2P08123 1366 aa13.43□□□□□ -0.26
SOD1-202ENST00000389995 CHD8Q9HCK8 2581 aa13.42□□□□□ -0.26
SOD1-202ENST00000389995 CFAP47Q6ZTR5 3102 aa13.42□□□□□ -0.26
SOD1-202ENST00000389995 STK25O00506 426 aa13.42□□□□□ -0.26
SOD1-202ENST00000389995 HOXA2O43364 376 aa13.42□□□□□ -0.26
SOD1-202ENST00000389995 CSDE1O75534 798 aaKnown RBP13.42□□□□□ -0.26
SOD1-202ENST00000389995 SLC26A2P50443 739 aa13.42□□□□□ -0.26
SOD1-202ENST00000389995 VASPP50552 380 aaPredicted RBP13.42□□□□□ -0.26
SOD1-202ENST00000389995 NLRP11P59045 1033 aaKnown RBP13.42□□□□□ -0.26
SOD1-202ENST00000389995 TDGQ13569 410 aa13.42□□□□□ -0.26
SOD1-202ENST00000389995 CEP55Q53EZ4 464 aa13.42□□□□□ -0.26
SOD1-202ENST00000389995 DGLUCYQ7Z3D6 616 aa13.42□□□□□ -0.26
SOD1-202ENST00000389995 PLCD3Q8N3E9 789 aa13.42□□□□□ -0.26
SOD1-202ENST00000389995 LRRC71Q8N4P6 559 aa13.42□□□□□ -0.26
SOD1-202ENST00000389995 TMEM87AQ8NBN3 555 aa13.42□□□□□ -0.26
SOD1-202ENST00000389995 SLC22A17Q8WUG5 538 aa13.42□□□□□ -0.26
SOD1-202ENST00000389995 BCL7CQ8WUZ0 217 aaPredicted RBP13.42□□□□□ -0.26
SOD1-202ENST00000389995 RSAD2Q8WXG1 361 aa13.42□□□□□ -0.26
SOD1-202ENST00000389995 LZTS2Q9BRK4 669 aa13.42□□□□□ -0.26
SOD1-202ENST00000389995 ZBP1Q9H171 429 aa13.42□□□□□ -0.26
SOD1-202ENST00000389995 KCNK12Q9HB15 430 aa13.42□□□□□ -0.26
SOD1-202ENST00000389995 AKT3Q9Y243 479 aa13.42□□□□□ -0.26
SOD1-202ENST00000389995 MYH15Q9Y2K3 1946 aa13.42□□□□□ -0.26
SOD1-202ENST00000389995 CACNA1GO43497 2377 aa13.42□□□□□ -0.26
SOD1-202ENST00000389995 MEIS1O00470 390 aa13.41□□□□□ -0.26
SOD1-202ENST00000389995 PRC1O43663 620 aa13.41□□□□□ -0.26
SOD1-202ENST00000389995 ZC3H11AO75152 810 aaKnown RBP eCLIP13.41□□□□□ -0.26
SOD1-202ENST00000389995 CFHP08603 1231 aa13.41□□□□□ -0.26
SOD1-202ENST00000389995 MYBP10242 640 aa13.41□□□□□ -0.26
SOD1-202ENST00000389995 GSPT1P15170 499 aaKnown RBP13.41□□□□□ -0.26
SOD1-202ENST00000389995 ZSCAN20P17040 1043 aaPredicted RBP13.41□□□□□ -0.26
SOD1-202ENST00000389995 ALDH7A1P49419 539 aaKnown RBP13.41□□□□□ -0.26
SOD1-202ENST00000389995 WWC2Q6AWC2 1192 aa13.41□□□□□ -0.26
SOD1-202ENST00000389995 CABP7Q86V35 215 aa13.41□□□□□ -0.26
SOD1-202ENST00000389995 DCLK2Q8N568 766 aa13.41□□□□□ -0.26
SOD1-202ENST00000389995 TMEM169Q96HH4 297 aa13.41□□□□□ -0.26
SOD1-202ENST00000389995 LRRC2Q9BYS8 371 aa13.41□□□□□ -0.26
SOD1-202ENST00000389995 ANO3Q9BYT9 981 aa13.41□□□□□ -0.26
SOD1-202ENST00000389995 ADAMTS10Q9H324 1103 aa13.41□□□□□ -0.26
SOD1-202ENST00000389995 RWDD1Q9H446 243 aaPredicted RBP13.41□□□□□ -0.26
SOD1-202ENST00000389995 USTQ9Y2C2 406 aa13.41□□□□□ -0.26
SOD1-202ENST00000389995 COL4A3Q01955 1670 aa13.4□□□□□ -0.26
SOD1-202ENST00000389995 KRBA1A5PL33 1030 aa13.4□□□□□ -0.26
SOD1-202ENST00000389995 CCDC69A6NI79 296 aa13.4□□□□□ -0.26
SOD1-202ENST00000389995 SPDYE4A6NLX3 237 aa13.4□□□□□ -0.26
SOD1-202ENST00000389995 SH2B2O14492 632 aaPredicted RBP13.4□□□□□ -0.26
SOD1-202ENST00000389995 DHX15O43143 795 aaKnown RBP13.4□□□□□ -0.26
SOD1-202ENST00000389995 LMNAP02545 664 aaKnown RBP13.4□□□□□ -0.26
SOD1-202ENST00000389995 SSBP05455 408 aaKnown RBP eCLIP13.4□□□□□ -0.26
SOD1-202ENST00000389995 ZNF76P36508 570 aa13.4□□□□□ -0.26
SOD1-202ENST00000389995 GNAQP50148 359 aa13.4□□□□□ -0.26
SOD1-202ENST00000389995 SPECC1Q5M775 1068 aa13.4□□□□□ -0.26
SOD1-202ENST00000389995 EFCAB12Q6NXP0 572 aa13.4□□□□□ -0.26
SOD1-202ENST00000389995 ZNF598Q86UK7 904 aaKnown RBP13.4□□□□□ -0.26
SOD1-202ENST00000389995 ST13P5Q8NFI4 369 aaPredicted RBP13.4□□□□□ -0.26
SOD1-202ENST00000389995 LPPQ93052 612 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms