RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 GJB7Q6PEY0 223 aa14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 SEPT14Q6ZU15 432 aa14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 KIAA0825Q8IV33 1275 aa14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 ARHGEF10LQ9HCE6 1279 aa14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 SLIT1O75093 1534 aa14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 WNT7AO00755 349 aa14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 KCNJ1P48048 391 aa14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 ERFP50548 548 aa14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 ITIH3Q06033 890 aa14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 MEA1Q16626 185 aa14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 TTBK2Q6IQ55 1244 aa14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 MSL3Q8N5Y2 521 aaKnown RBP14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 SAYSD1Q9NPB0 183 aa14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 ANAPC7Q9UJX3 599 aa14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 USP15Q9Y4E8 981 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 CAND2O75155 1236 aa14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 SKAP2O75563 359 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 VEGFAP15692 232 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 HOXA7P31268 230 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 JAMLQ86YT9 394 aa14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 POMGNT1Q8WZA1 660 aa14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 CFAP57Q96MR6 1250 aa14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 NUDCD1Q96RS6 583 aa14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 MXD3Q9BW11 206 aa14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 DHX36Q9H2U1 1008 aaKnown RBP14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 FAM53CQ9NYF3 392 aa14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 SRP68Q9UHB9 627 aaKnown RBP14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 TTC7AQ9ULT0 858 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 AGTP01019 485 aa14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 PBX1P40424 430 aa14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 YWHAGP61981 247 aaKnown RBP eCLIP14.12□□□□□ -0.154e-6■■■■□ 21.9
TRAPPC9-201ENST00000389328 CASC4Q6P4E1 433 aa14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 SPATA24Q86W54 205 aa14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 CLEC10AQ8IUN9 316 aa14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 TRIM59Q8IWR1 403 aa14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 TEKT1Q969V4 418 aa14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 HAUS1Q96CS2 278 aa14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 PREX1Q8TCU6 1659 aa14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 IGF2BP3O00425 579 aaKnown RBP eCLIP14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 POLR2MP0CAP2 368 aa14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 SOX5P35711 763 aa14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 DYNLT1P63172 113 aa14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 DHX34Q14147 1143 aaKnown RBP14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 SPARCL1Q14515 664 aa14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 PDIA5Q14554 519 aa14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 LGSNQ5TDP6 509 aa14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 CENPPQ6IPU0 288 aa14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 ERP44Q9BS26 406 aa14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 NAGPAQ9UK23 515 aa14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 ZNF233A6NK53 670 aa14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 PLS3P13797 630 aa14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 HSPA9P38646 679 aaKnown RBP14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 MIPOL1Q8TD10 442 aa14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 CALR3Q96L12 384 aaKnown RBP14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 IWS1Q96ST2 819 aa14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 CYTH2Q99418 400 aa14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 FERMT1Q9BQL6 677 aa14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 CNOT8Q9UFF9 292 aaKnown RBP14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 ANAPC4Q9UJX5 808 aa14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 LEMD3Q9Y2U8 911 aa14.12□□□□□ -0.15
TRAPPC9-201ENST00000389328 ESRRAP11474 423 aaPredicted RBP14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 ITGA4P13612 1032 aa14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 ERVK-9P63128 1117 aa14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 SKOR1P84550 965 aa14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 FAM98CQ17RN3 349 aaKnown RBP14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 OGFOD1Q8N543 542 aa14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 PAF1Q8N7H5 531 aa14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 KIAA0895Q8NCT3 520 aa14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 TEKT3Q9BXF9 490 aa14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 ARL2BPQ9Y2Y0 163 aa14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 CLTCQ00610 1675 aaKnown RBP14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 GDF11O95390 407 aa14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 TRPC3Q13507 836 aa14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 BSPRYQ5W0U4 402 aa14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 FRMD5Q7Z6J6 570 aa14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 ZNF577Q9BSK1 485 aa14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 SPATA31A3Q5VYP0 1347 aa14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 UBAP1LF5GYI3 381 aa14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 GRB10Q13322 594 aa14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 PSMD6Q15008 389 aa14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 PLCB4Q15147 1175 aa14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 TPCN2Q8NHX9 752 aa14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 FBXO41Q8TF61 875 aa14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 C8orf37Q96NL8 207 aa14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 NACC1Q96RE7 527 aa14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 INTS2Q9H0H0 1204 aaKnown RBP14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 DIP2AQ14689 1571 aa14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 TMEM120BA0PK00 339 aa14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 ZBTB5O15062 677 aa14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 FANCGO15287 622 aa14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 SORBS3O60504 671 aa14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 ZNF564Q8TBZ8 553 aaPredicted RBP14.11□□□□□ -0.15
TRAPPC9-201ENST00000389328 EPHB6O15197 1021 aa14.1□□□□□ -0.15
TRAPPC9-201ENST00000389328 DCTN3O75935 186 aa14.1□□□□□ -0.15
TRAPPC9-201ENST00000389328 INHBAP08476 426 aa14.1□□□□□ -0.15
TRAPPC9-201ENST00000389328 NMT1P30419 496 aaKnown RBP14.1□□□□□ -0.15
TRAPPC9-201ENST00000389328 ARHGAP4P98171 946 aa14.1□□□□□ -0.15
TRAPPC9-201ENST00000389328 CNPY4Q8N129 248 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms