RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 KCND1Q9NSA2 647 aa11.13□□□□□ -0.63
LTN1-203ENST00000389195 ZNHIT6Q9NWK9 470 aaKnown RBP11.13□□□□□ -0.63
LTN1-203ENST00000389195 PTPRFP10586 1907 aa11.13□□□□□ -0.63
LTN1-203ENST00000389195 DENND3A2RUS2 1198 aa11.12□□□□□ -0.63
LTN1-203ENST00000389195 CALUO43852 315 aaPredicted RBP11.12□□□□□ -0.63
LTN1-203ENST00000389195 STBD1O95210 358 aa11.12□□□□□ -0.63
LTN1-203ENST00000389195 MOCS3O95396 460 aa11.12□□□□□ -0.63
LTN1-203ENST00000389195 FGFR1OPO95684 399 aaKnown RBP11.12□□□□□ -0.63
LTN1-203ENST00000389195 HARSP12081 509 aaKnown RBP11.12□□□□□ -0.63
LTN1-203ENST00000389195 ZNF131P52739 623 aa11.12□□□□□ -0.63
LTN1-203ENST00000389195 SH3D19Q5HYK7 790 aa11.12□□□□□ -0.63
LTN1-203ENST00000389195 HGSNATQ68CP4 663 aa11.12□□□□□ -0.63
LTN1-203ENST00000389195 GPAT2Q6NUI2 795 aa11.12□□□□□ -0.63
LTN1-203ENST00000389195 KAT5Q92993 513 aa11.12□□□□□ -0.63
LTN1-203ENST00000389195 ZBTB45Q96K62 511 aaPredicted RBP11.12□□□□□ -0.63
LTN1-203ENST00000389195 SUGCTQ9HAC7 445 aa11.12□□□□□ -0.63
LTN1-203ENST00000389195 XPNPEP1Q9NQW7 623 aa11.12□□□□□ -0.63
LTN1-203ENST00000389195 EHD2Q9NZN4 543 aa11.12□□□□□ -0.63
LTN1-203ENST00000389195 PLAGL2Q9UPG8 496 aa11.12□□□□□ -0.63
LTN1-203ENST00000389195 PPP2R3BQ9Y5P8 575 aa11.12□□□□□ -0.63
LTN1-203ENST00000389195 LCTP09848 1927 aa11.12□□□□□ -0.63
LTN1-203ENST00000389195 A0A087X0T9 212 aa11.12□□□□□ -0.63
LTN1-203ENST00000389195 SPDYE5A6NIY4 337 aa11.12□□□□□ -0.63
LTN1-203ENST00000389195 SPATA31C2B4DYI2 1134 aa11.12□□□□□ -0.63
LTN1-203ENST00000389195 CTIFO43310 598 aaKnown RBP11.12□□□□□ -0.63
LTN1-203ENST00000389195 NCK2O43639 380 aa11.12□□□□□ -0.63
LTN1-203ENST00000389195 KIF5CO60282 957 aa11.12□□□□□ -0.63
LTN1-203ENST00000389195 SLU7O95391 586 aaKnown RBP11.12□□□□□ -0.63
LTN1-203ENST00000389195 ATP1A1P05023 1023 aaKnown RBP11.12□□□□□ -0.63
LTN1-203ENST00000389195 FAM228BP0C875 321 aa11.12□□□□□ -0.63
LTN1-203ENST00000389195 NF2P35240 595 aa11.12□□□□□ -0.63
LTN1-203ENST00000389195 KCNJ6P48051 423 aa11.12□□□□□ -0.63
LTN1-203ENST00000389195 PPP2R3AQ06190 1150 aa11.12□□□□□ -0.63
LTN1-203ENST00000389195 PPATQ06203 517 aa11.12□□□□□ -0.63
LTN1-203ENST00000389195 EXOC3L4Q17RC7 722 aa11.12□□□□□ -0.63
LTN1-203ENST00000389195 ZNF397Q8NF99 534 aaPredicted RBP11.12□□□□□ -0.63
LTN1-203ENST00000389195 FGD4Q96M96 766 aa11.12□□□□□ -0.63
LTN1-203ENST00000389195 NAA15Q9BXJ9 866 aaKnown RBP11.12□□□□□ -0.63
LTN1-203ENST00000389195 HAUS4Q9H6D7 363 aa11.12□□□□□ -0.63
LTN1-203ENST00000389195 PACSIN2Q9UNF0 486 aaPredicted RBP11.12□□□□□ -0.63
LTN1-203ENST00000389195 CAPN6Q9Y6Q1 641 aa11.12□□□□□ -0.63
LTN1-203ENST00000389195 GGPS1O95749 300 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 AFPP02771 609 aaKnown RBP11.11□□□□□ -0.63
LTN1-203ENST00000389195 EDN1P05305 212 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 EPB41P11171 864 aaKnown RBP11.11□□□□□ -0.63
LTN1-203ENST00000389195 UCHL3P15374 230 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 PPP1R2P41236 205 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 WNT7BP56706 349 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 RNASE9P60153 205 aaKnown RBP11.11□□□□□ -0.63
LTN1-203ENST00000389195 PPP3CAQ08209 521 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 MEA1Q16626 185 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 EDRF1Q3B7T1 1238 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 DPY19L2P1Q6NXN4 242 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 PDXDC1Q6P996 788 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 ABHD15Q6UXT9 468 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 LRRC71Q8N4P6 559 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 JAKMIP2Q96AA8 810 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 CEP63Q96MT8 703 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 PCYT2Q99447 389 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 LARSQ9P2J5 1176 aaKnown RBP11.11□□□□□ -0.63
LTN1-203ENST00000389195 GFPT2O94808 682 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 ADRB2P07550 413 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 DLATP10515 647 aaKnown RBP11.11□□□□□ -0.63
LTN1-203ENST00000389195 PLS3P13797 630 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 GUCY2CP25092 1073 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 GTF2F1P35269 517 aaKnown RBP eCLIP11.11□□□□□ -0.63
LTN1-203ENST00000389195 NAP1L1P55209 391 aaKnown RBP11.11□□□□□ -0.63
LTN1-203ENST00000389195 KRT76Q01546 638 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 GHRHRQ02643 423 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 PTK2Q05397 1052 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 TRIM14Q14142 442 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 ZBTB41Q5SVQ8 909 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 TEX35Q5T0J7 233 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 HS2ST1Q7LGA3 356 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 C4orf19Q8IY42 314 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 CCDC51Q96ER9 411 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 BORCS6Q96GS4 357 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 IFIH1Q9BYX4 1025 aaKnown RBP11.11□□□□□ -0.63
LTN1-203ENST00000389195 NMRK2Q9NPI5 230 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 GINM1Q9NU53 330 aa11.11□□□□□ -0.63
LTN1-203ENST00000389195 PPP1R37O75864 691 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 GAP43P17677 238 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 FECHP22830 423 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 SSTR3P32745 418 aaPredicted RBP11.1□□□□□ -0.63
LTN1-203ENST00000389195 IGBP1P78318 339 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 SLC39A4Q6P5W5 647 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 USP50Q70EL3 339 aaPredicted RBP11.1□□□□□ -0.63
LTN1-203ENST00000389195 SPAG5Q96R06 1193 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 PI4K2AQ9BTU6 479 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 GANQ9H2C0 597 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 PCDHA13Q9Y5I0 950 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 SYNGAP1Q96PV0 1343 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 GSTTP1A0A1W2PQM5 241 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 SOCS7O14512 581 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 CNGA1P29973 690 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 PSMC2P35998 433 aaKnown RBP11.1□□□□□ -0.63
LTN1-203ENST00000389195 TCF7P36402 384 aaPredicted RBP11.1□□□□□ -0.63
LTN1-203ENST00000389195 USP8P40818 1118 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 ACOT2P49753 483 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 OAZ1P54368 228 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms