RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 GMCL1Q96IK5 515 aa15.12■□□□□ 0.01
NEK4-202ENST00000383721 RGL1Q9NZL6 768 aa15.12■□□□□ 0.01
NEK4-202ENST00000383721 CLIC2O15247 247 aa15.12■□□□□ 0.01
NEK4-202ENST00000383721 EIF3HO15372 352 aaKnown RBP eCLIP15.12■□□□□ 0.01
NEK4-202ENST00000383721 GCNT3O95395 438 aa15.12■□□□□ 0.01
NEK4-202ENST00000383721 ZBTB48P10074 688 aaPredicted RBP15.12■□□□□ 0.01
NEK4-202ENST00000383721 JAM2P57087 298 aa15.12■□□□□ 0.01
NEK4-202ENST00000383721 GNGT1P63211 74 aa15.12■□□□□ 0.01
NEK4-202ENST00000383721 JAG1P78504 1218 aa15.12■□□□□ 0.01
NEK4-202ENST00000383721 IKQ13123 557 aaPredicted RBP15.12■□□□□ 0.01
NEK4-202ENST00000383721 CFAP58Q5T655 872 aa15.12■□□□□ 0.01
NEK4-202ENST00000383721 LDHDQ86WU2 507 aa15.12■□□□□ 0.01
NEK4-202ENST00000383721 KLHL7Q8IXQ5 586 aa15.12■□□□□ 0.01
NEK4-202ENST00000383721 EIF2AK1Q9BQI3 630 aaKnown RBP15.12■□□□□ 0.01
NEK4-202ENST00000383721 IKZF4Q9H2S9 585 aa15.12■□□□□ 0.01
NEK4-202ENST00000383721 METTL14Q9HCE5 456 aaKnown RBP15.12■□□□□ 0.01
NEK4-202ENST00000383721 SLC16A3O15427 465 aaKnown RBP15.11■□□□□ 0.01
NEK4-202ENST00000383721 TGFB1I1O43294 461 aa15.11■□□□□ 0.01
NEK4-202ENST00000383721 EYA4O95677 639 aa15.11■□□□□ 0.01
NEK4-202ENST00000383721 NOP2P46087 812 aaKnown RBP15.11■□□□□ 0.01
NEK4-202ENST00000383721 CORO7P57737 925 aa15.11■□□□□ 0.01
NEK4-202ENST00000383721 TNNC1P63316 161 aa15.11■□□□□ 0.01
NEK4-202ENST00000383721 SKOR1P84550 965 aa15.11■□□□□ 0.01
NEK4-202ENST00000383721 TTC19Q6DKK2 380 aaPredicted RBP15.11■□□□□ 0.01
NEK4-202ENST00000383721 GJB7Q6PEY0 223 aa15.11■□□□□ 0.01
NEK4-202ENST00000383721 SH2D3CQ8N5H7 860 aa15.11■□□□□ 0.01
NEK4-202ENST00000383721 POLR3CQ9BUI4 534 aaPredicted RBP15.11■□□□□ 0.01
NEK4-202ENST00000383721 FBXL5Q9UKA1 691 aa15.11■□□□□ 0.01
NEK4-202ENST00000383721 STK24Q9Y6E0 443 aa15.11■□□□□ 0.01
NEK4-202ENST00000383721 SSC5DA1L4H1 1573 aa15.11■□□□□ 0.01
NEK4-202ENST00000383721 SFI1A8K8P3 1242 aa15.11■□□□□ 0.01
NEK4-202ENST00000383721 TBCAO75347 108 aaKnown RBP15.11■□□□□ 0.01
NEK4-202ENST00000383721 CLSTN1O94985 981 aa15.11■□□□□ 0.01
NEK4-202ENST00000383721 RPL13P26373 211 aaKnown RBP15.11■□□□□ 0.01
NEK4-202ENST00000383721 PRKG1Q13976 671 aa15.11■□□□□ 0.01
NEK4-202ENST00000383721 PTPROQ16827 1216 aa15.11■□□□□ 0.01
NEK4-202ENST00000383721 ABCB5Q2M3G0 1257 aa15.11■□□□□ 0.01
NEK4-202ENST00000383721 SLC30A10Q6XR72 485 aa15.11■□□□□ 0.01
NEK4-202ENST00000383721 TPCN2Q8NHX9 752 aa15.11■□□□□ 0.01
NEK4-202ENST00000383721 SCFD2Q8WU76 684 aa15.11■□□□□ 0.01
NEK4-202ENST00000383721 BORCS6Q96GS4 357 aa15.11■□□□□ 0.01
NEK4-202ENST00000383721 GCNT4Q9P109 453 aa15.11■□□□□ 0.01
NEK4-202ENST00000383721 RABGAP1Q9Y3P9 1069 aa15.11■□□□□ 0.01
NEK4-202ENST00000383721 PCDHB13Q9Y5F0 798 aa15.11■□□□□ 0.01
NEK4-202ENST00000383721 FLOT1O75955 427 aa15.1■□□□□ 0.01
NEK4-202ENST00000383721 CCT5P48643 541 aa15.1■□□□□ 0.01
NEK4-202ENST00000383721 KCTD16Q68DU8 428 aa15.1■□□□□ 0.01
NEK4-202ENST00000383721 RINT1Q6NUQ1 792 aa15.1■□□□□ 0.01
NEK4-202ENST00000383721 PBKQ96KB5 322 aa15.1■□□□□ 0.01
NEK4-202ENST00000383721 RABEP2Q9H5N1 569 aa15.1■□□□□ 0.01
NEK4-202ENST00000383721 OLFML3Q9NRN5 406 aa15.1■□□□□ 0.01
NEK4-202ENST00000383721 IGLV3-22A0A075B6J6 115 aa15.1■□□□□ 0.01
NEK4-202ENST00000383721 DDX3XO00571 662 aaKnown RBP eCLIP15.1■□□□□ 0.015e-8■■■■□ 20
NEK4-202ENST00000383721 CYP3A4P08684 503 aa15.1■□□□□ 0.01
NEK4-202ENST00000383721 BMP3P12645 472 aa15.1■□□□□ 0.01
NEK4-202ENST00000383721 IFI16Q16666 785 aaKnown RBP15.1■□□□□ 0.01
NEK4-202ENST00000383721 ACTRT1Q8TDG2 376 aa15.1■□□□□ 0.01
NEK4-202ENST00000383721 PIGOQ8TEQ8 1089 aa15.1■□□□□ 0.01
NEK4-202ENST00000383721 WHAMMQ8TF30 809 aa15.1■□□□□ 0.01
NEK4-202ENST00000383721 CDCA5Q96FF9 252 aa15.1■□□□□ 0.01
NEK4-202ENST00000383721 CEP104O60308 925 aa15.09■□□□□ 0.01
NEK4-202ENST00000383721 ANXA13P27216 316 aa15.09■□□□□ 0.01
NEK4-202ENST00000383721 ZNF76P36508 570 aa15.09■□□□□ 0.01
NEK4-202ENST00000383721 MAGEA9P43362 315 aa15.09■□□□□ 0.01
NEK4-202ENST00000383721 ERVK-9P63128 1117 aa15.09■□□□□ 0.01
NEK4-202ENST00000383721 CTTNQ14247 550 aaKnown RBP15.09■□□□□ 0.01
NEK4-202ENST00000383721 RRP1BQ14684 758 aaKnown RBP15.09■□□□□ 0.01
NEK4-202ENST00000383721 OLIG1Q8TAK6 271 aa15.09■□□□□ 0.01
NEK4-202ENST00000383721 BCAS4Q8TDM0 211 aa15.09■□□□□ 0.01
NEK4-202ENST00000383721 HSD17B14Q9BPX1 270 aa15.09■□□□□ 0.01
NEK4-202ENST00000383721 ZMYM2Q9UBW7 1377 aa15.09■□□□□ 0.01
NEK4-202ENST00000383721 COL2A1P02458 1487 aaPredicted RBP15.09■□□□□ 0.01
NEK4-202ENST00000383721 H2AFZP0C0S5 128 aa15.09■□□□□ 0.01
NEK4-202ENST00000383721 ECHS1P30084 290 aa15.09■□□□□ 0.01
NEK4-202ENST00000383721 NMT1P30419 496 aaKnown RBP15.09■□□□□ 0.01
NEK4-202ENST00000383721 BTNL9Q6UXG8 535 aa15.09■□□□□ 0.01
NEK4-202ENST00000383721 H2AFVQ71UI9 128 aa15.09■□□□□ 0.01
NEK4-202ENST00000383721 SLFN11Q7Z7L1 901 aa15.09■□□□□ 0.01
NEK4-202ENST00000383721 CD302Q8IX05 232 aa15.09■□□□□ 0.01
NEK4-202ENST00000383721 METTL13Q8N6R0 699 aa15.09■□□□□ 0.01
NEK4-202ENST00000383721 ISCUQ9H1K1 167 aa15.09■□□□□ 0.01
NEK4-202ENST00000383721 A0A1W2PRG0 241 aa15.08■□□□□ 0
NEK4-202ENST00000383721 GTPBP10A4D1E9 387 aaKnown RBP15.08■□□□□ 0
NEK4-202ENST00000383721 GH2P01242 217 aa15.08■□□□□ 0
NEK4-202ENST00000383721 PDCLQ13371 301 aa15.08■□□□□ 0
NEK4-202ENST00000383721 WDR18Q9BV38 432 aa15.08■□□□□ 0
NEK4-202ENST00000383721 AP1M1Q9BXS5 423 aa15.08■□□□□ 0
NEK4-202ENST00000383721 STXBP5LQ9Y2K9 1186 aa15.08■□□□□ 0
NEK4-202ENST00000383721 ATP8B3O60423 1300 aa15.08■□□□□ 0
NEK4-202ENST00000383721 PIK3CDO00329 1044 aa15.08■□□□□ 0
NEK4-202ENST00000383721 ZBTB39O15060 712 aa15.08■□□□□ 0
NEK4-202ENST00000383721 GFPT2O94808 682 aa15.08■□□□□ 0
NEK4-202ENST00000383721 SLITRK3O94933 977 aa15.08■□□□□ 0
NEK4-202ENST00000383721 GAP43P17677 238 aa15.08■□□□□ 0
NEK4-202ENST00000383721 HSPA9P38646 679 aaKnown RBP15.08■□□□□ 0
NEK4-202ENST00000383721 ZC2HC1CQ53FD0 456 aaPredicted RBP15.08■□□□□ 0
NEK4-202ENST00000383721 CHADLQ6NUI6 762 aa15.08■□□□□ 0
NEK4-202ENST00000383721 MOB2Q70IA6 237 aa15.08■□□□□ 0
NEK4-202ENST00000383721 OTOP1Q7RTM1 612 aa15.08■□□□□ 0
NEK4-202ENST00000383721 SPICE1Q8N0Z3 855 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms