RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 ZNF577Q9BSK1 485 aa25.65■■□□□ 1.7
VLDLR-201ENST00000382096 S1PR5Q9H228 398 aa25.65■■□□□ 1.7
VLDLR-201ENST00000382096 MAFBQ9Y5Q3 323 aaPredicted RBP25.65■■□□□ 1.7
VLDLR-201ENST00000382096 TOB2Q14106 344 aaPredicted RBP25.64■■□□□ 1.7
VLDLR-201ENST00000382096 ZNF746Q6NUN9 644 aaPredicted RBP25.64■■□□□ 1.7
VLDLR-201ENST00000382096 ANKRD54Q6NXT1 300 aa25.64■■□□□ 1.7
VLDLR-201ENST00000382096 PPP1R16BQ96T49 567 aa25.64■■□□□ 1.7
VLDLR-201ENST00000382096 TMEM117Q9H0C3 514 aa25.64■■□□□ 1.7
VLDLR-201ENST00000382096 SH3GLB2Q9NR46 395 aa25.64■■□□□ 1.7
VLDLR-201ENST00000382096 VTNP04004 478 aa25.63■■□□□ 1.69
VLDLR-201ENST00000382096 PTPN21Q16825 1174 aa25.63■■□□□ 1.69
VLDLR-201ENST00000382096 PLPP4Q5VZY2 271 aa25.63■■□□□ 1.69
VLDLR-201ENST00000382096 SMAP1Q8IYB5 467 aaPredicted RBP25.63■■□□□ 1.69
VLDLR-201ENST00000382096 LENG9Q96B70 501 aa25.63■■□□□ 1.69
VLDLR-201ENST00000382096 SLC26A6Q9BXS9 759 aa25.63■■□□□ 1.69
VLDLR-201ENST00000382096 PUF60Q9UHX1 559 aaKnown RBP25.63■■□□□ 1.69
VLDLR-201ENST00000382096 MYO10Q9HD67 2058 aa25.62■■□□□ 1.69
VLDLR-201ENST00000382096 HOXA2O43364 376 aa25.62■■□□□ 1.69
VLDLR-201ENST00000382096 EDIL3O43854 480 aa25.62■■□□□ 1.69
VLDLR-201ENST00000382096 TECP42680 631 aa25.62■■□□□ 1.69
VLDLR-201ENST00000382096 SYCE2Q6PIF2 218 aa25.62■■□□□ 1.69
VLDLR-201ENST00000382096 LRRC55Q6ZSA7 311 aa25.62■■□□□ 1.69
VLDLR-201ENST00000382096 CKAP2LQ8IYA6 745 aa25.62■■□□□ 1.69
VLDLR-201ENST00000382096 CASD1Q96PB1 797 aa25.62■■□□□ 1.69
VLDLR-201ENST00000382096 TCF25Q9BQ70 676 aa25.62■■□□□ 1.69
VLDLR-201ENST00000382096 TM6SF1Q9BZW5 370 aa25.62■■□□□ 1.69
VLDLR-201ENST00000382096 NCOA5Q9HCD5 579 aaKnown RBP25.62■■□□□ 1.69
VLDLR-201ENST00000382096 NGRNQ9NPE2 291 aaKnown RBP25.62■■□□□ 1.69
VLDLR-201ENST00000382096 RNF19AQ9NV58 838 aa25.62■■□□□ 1.69
VLDLR-201ENST00000382096 PPM1AP35813 382 aa25.61■■□□□ 1.69
VLDLR-201ENST00000382096 CCT2P78371 535 aaKnown RBP25.61■■□□□ 1.69
VLDLR-201ENST00000382096 PRR16Q569H4 304 aa25.61■■□□□ 1.69
VLDLR-201ENST00000382096 KCNT2Q6UVM3 1135 aa25.61■■□□□ 1.69
VLDLR-201ENST00000382096 LRRC43Q8N309 656 aa25.61■■□□□ 1.69
VLDLR-201ENST00000382096 METTL13Q8N6R0 699 aa25.61■■□□□ 1.69
VLDLR-201ENST00000382096 ENTPD7Q9NQZ7 604 aa25.61■■□□□ 1.69
VLDLR-201ENST00000382096 VPS54Q9P1Q0 977 aa25.61■■□□□ 1.69
VLDLR-201ENST00000382096 CEP131Q9UPN4 1083 aa25.61■■□□□ 1.69
VLDLR-201ENST00000382096 HIDE1A8MVS5 230 aa25.6■■□□□ 1.69
VLDLR-201ENST00000382096 HOXB8P17481 243 aaPredicted RBP25.6■■□□□ 1.69
VLDLR-201ENST00000382096 VCPP55072 806 aaKnown RBP25.6■■□□□ 1.69
VLDLR-201ENST00000382096 PCDHA10Q9Y5I2 948 aa25.6■■□□□ 1.69
VLDLR-201ENST00000382096 ZFHX2Q9C0A1 2572 aaPredicted RBP25.59■■□□□ 1.69
VLDLR-201ENST00000382096 MYO15AQ9UKN7 3530 aa25.59■■□□□ 1.69
VLDLR-201ENST00000382096 MAGEB2O15479 319 aa25.59■■□□□ 1.69
VLDLR-201ENST00000382096 USP11P51784 963 aa25.59■■□□□ 1.69
VLDLR-201ENST00000382096 CLCN3P51790 818 aa25.59■■□□□ 1.69
VLDLR-201ENST00000382096 ZNF710Q8N1W2 664 aa25.59■■□□□ 1.69
VLDLR-201ENST00000382096 LINC01465Q8N7H1 131 aa25.59■■□□□ 1.69
VLDLR-201ENST00000382096 ZNF274Q96GC6 653 aaPredicted RBP25.59■■□□□ 1.69
VLDLR-201ENST00000382096 ZNF558Q96NG5 402 aa25.59■■□□□ 1.69
VLDLR-201ENST00000382096 CYP46A1Q9Y6A2 500 aa25.59■■□□□ 1.69
VLDLR-201ENST00000382096 PLXNA3P51805 1871 aa25.59■■□□□ 1.69
VLDLR-201ENST00000382096 ST18O60284 1047 aa25.58■■□□□ 1.69
VLDLR-201ENST00000382096 PSAPP07602 524 aa25.58■■□□□ 1.69
VLDLR-201ENST00000382096 LLGL2Q6P1M3 1020 aa25.58■■□□□ 1.69
VLDLR-201ENST00000382096 ADAMTS10Q9H324 1103 aa25.58■■□□□ 1.69
VLDLR-201ENST00000382096 EIF4BP23588 611 aaKnown RBP25.57■■□□□ 1.68
VLDLR-201ENST00000382096 AVPR2P30518 371 aa25.57■■□□□ 1.68
VLDLR-201ENST00000382096 PBX3P40426 434 aa25.57■■□□□ 1.68
VLDLR-201ENST00000382096 NLRP11P59045 1033 aaKnown RBP25.57■■□□□ 1.68
VLDLR-201ENST00000382096 KRT17Q04695 432 aa25.57■■□□□ 1.68
VLDLR-201ENST00000382096 TRMT1LQ7Z2T5 733 aaKnown RBP25.57■■□□□ 1.68
VLDLR-201ENST00000382096 ECHDC2Q86YB7 292 aa25.57■■□□□ 1.68
VLDLR-201ENST00000382096 TRIM22Q8IYM9 498 aa25.57■■□□□ 1.68
VLDLR-201ENST00000382096 ABI1Q8IZP0 508 aa25.57■■□□□ 1.68
VLDLR-201ENST00000382096 FAM177A1Q8N128 213 aaPredicted RBP25.57■■□□□ 1.68
VLDLR-201ENST00000382096 FAM167AQ96KS9 214 aa25.57■■□□□ 1.68
VLDLR-201ENST00000382096 MAP7D2Q96T17 732 aa25.57■■□□□ 1.68
VLDLR-201ENST00000382096 APOL5Q9BWW9 433 aa25.57■■□□□ 1.68
VLDLR-201ENST00000382096 SPG21Q9NZD8 308 aa25.57■■□□□ 1.68
VLDLR-201ENST00000382096 GABBR1Q9UBS5 961 aa25.57■■□□□ 1.68
VLDLR-201ENST00000382096 TCEAL9Q9UHQ7 104 aa25.57■■□□□ 1.68
VLDLR-201ENST00000382096 AKT3Q9Y243 479 aa25.57■■□□□ 1.68
VLDLR-201ENST00000382096 MSH4O15457 936 aa25.56■■□□□ 1.68
VLDLR-201ENST00000382096 ZSCAN20P17040 1043 aaPredicted RBP25.56■■□□□ 1.68
VLDLR-201ENST00000382096 EFCAB12Q6NXP0 572 aa25.56■■□□□ 1.68
VLDLR-201ENST00000382096 TMC7Q7Z402 723 aa25.56■■□□□ 1.68
VLDLR-201ENST00000382096 CASP10Q92851 521 aa25.56■■□□□ 1.68
VLDLR-201ENST00000382096 RIT2Q99578 217 aa25.56■■□□□ 1.68
VLDLR-201ENST00000382096 IRF2BPLQ9H1B7 796 aa25.56■■□□□ 1.68
VLDLR-201ENST00000382096 PCDHA4Q9UN74 947 aa25.56■■□□□ 1.68
VLDLR-201ENST00000382096 NR2E1Q9Y466 385 aa25.56■■□□□ 1.68
VLDLR-201ENST00000382096 DENND4AQ7Z401 1863 aa25.55■■□□□ 1.68
VLDLR-201ENST00000382096 WDR64B1ANS9 1081 aa25.55■■□□□ 1.68
VLDLR-201ENST00000382096 M0R2N6 131 aa25.55■■□□□ 1.68
VLDLR-201ENST00000382096 DEXIO95424 95 aa25.55■■□□□ 1.68
VLDLR-201ENST00000382096 TMOD1P28289 359 aa25.55■■□□□ 1.68
VLDLR-201ENST00000382096 NLRP5P59047 1200 aa25.55■■□□□ 1.68
VLDLR-201ENST00000382096 SSRP1Q08945 709 aaKnown RBP25.55■■□□□ 1.68
VLDLR-201ENST00000382096 CLLU1OSQ5K130 101 aa25.55■■□□□ 1.68
VLDLR-201ENST00000382096 SLC5A5Q92911 643 aa25.55■■□□□ 1.68
VLDLR-201ENST00000382096 C22orf23Q9BZE7 217 aa25.55■■□□□ 1.68
VLDLR-201ENST00000382096 VPS13AQ96RL7 3174 aa25.54■■□□□ 1.68
VLDLR-201ENST00000382096 SP100P23497 879 aaPredicted RBP25.54■■□□□ 1.68
VLDLR-201ENST00000382096 NUBP1P53384 320 aa25.54■■□□□ 1.68
VLDLR-201ENST00000382096 SMC1AQ14683 1233 aaKnown RBP25.54■■□□□ 1.68
VLDLR-201ENST00000382096 TPRNQ4KMQ1 711 aa25.54■■□□□ 1.68
VLDLR-201ENST00000382096 ZBTB33Q86T24 672 aa25.54■■□□□ 1.68
VLDLR-201ENST00000382096 SLC39A11Q8N1S5 342 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms