RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 SPECC1Q5M775 1068 aa21.58■■□□□ 1.04
GTF3A-201ENST00000381140 TMEM40Q8WWA1 233 aa21.58■■□□□ 1.04
GTF3A-201ENST00000381140 LRCH3Q96II8 777 aa21.58■■□□□ 1.04
GTF3A-201ENST00000381140 AK8Q96MA6 479 aa21.58■■□□□ 1.04
GTF3A-201ENST00000381140 NLRP4Q96MN2 994 aa21.58■■□□□ 1.04
GTF3A-201ENST00000381140 CSRNP2Q9H175 543 aa21.58■■□□□ 1.04
GTF3A-201ENST00000381140 ADAMTS10Q9H324 1103 aa21.58■■□□□ 1.04
GTF3A-201ENST00000381140 FBXO2Q9UK22 296 aaPredicted RBP21.58■■□□□ 1.04
GTF3A-201ENST00000381140 NOC2LQ9Y3T9 749 aaKnown RBP21.58■■□□□ 1.04
GTF3A-201ENST00000381140 E9PMD0 336 aa21.57■■□□□ 1.04
GTF3A-201ENST00000381140 RPS6KA5O75582 802 aa21.57■■□□□ 1.04
GTF3A-201ENST00000381140 DGAT1O75907 488 aa21.57■■□□□ 1.04
GTF3A-201ENST00000381140 ATP2A2P16615 1042 aaKnown RBP21.57■■□□□ 1.04
GTF3A-201ENST00000381140 WDR5P61964 334 aaKnown RBP21.57■■□□□ 1.04
GTF3A-201ENST00000381140 SLC39A14Q15043 492 aa21.57■■□□□ 1.04
GTF3A-201ENST00000381140 PADI6Q6TGC4 694 aa21.57■■□□□ 1.04
GTF3A-201ENST00000381140 USP38Q8NB14 1042 aa21.57■■□□□ 1.04
GTF3A-201ENST00000381140 TCP11Q8WWU5 503 aa21.57■■□□□ 1.04
GTF3A-201ENST00000381140 PRPF31Q8WWY3 499 aaKnown RBP21.57■■□□□ 1.04
GTF3A-201ENST00000381140 PSPC1Q8WXF1 523 aaKnown RBP21.57■■□□□ 1.04
GTF3A-201ENST00000381140 APBB2Q92870 758 aa21.57■■□□□ 1.04
GTF3A-201ENST00000381140 CLIC6Q96NY7 704 aa21.57■■□□□ 1.04
GTF3A-201ENST00000381140 PNMA5Q96PV4 448 aa21.57■■□□□ 1.04
GTF3A-201ENST00000381140 BHMT2Q9H2M3 363 aa21.57■■□□□ 1.04
GTF3A-201ENST00000381140 XPNPEP1Q9NQW7 623 aa21.57■■□□□ 1.04
GTF3A-201ENST00000381140 PADI3Q9ULW8 664 aa21.57■■□□□ 1.04
GTF3A-201ENST00000381140 DNM3Q9UQ16 869 aa21.57■■□□□ 1.04
GTF3A-201ENST00000381140 ZDHHC9Q9Y397 364 aa21.57■■□□□ 1.04
GTF3A-201ENST00000381140 A0A087WZ62 844 aa21.56■■□□□ 1.04
GTF3A-201ENST00000381140 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.56■■□□□ 1.04
GTF3A-201ENST00000381140 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.56■■□□□ 1.04
GTF3A-201ENST00000381140 GAS2O43903 313 aaKnown RBP21.56■■□□□ 1.04
GTF3A-201ENST00000381140 SSBP05455 408 aaKnown RBP eCLIP21.56■■□□□ 1.04
GTF3A-201ENST00000381140 NASPP49321 788 aaPredicted RBP21.56■■□□□ 1.04
GTF3A-201ENST00000381140 DEFB103AP81534 67 aa21.56■■□□□ 1.04
GTF3A-201ENST00000381140 GRB10Q13322 594 aa21.56■■□□□ 1.04
GTF3A-201ENST00000381140 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.56■■□□□ 1.041e-6■■■■□ 21.8
GTF3A-201ENST00000381140 KCNK18Q7Z418 384 aa21.56■■□□□ 1.04
GTF3A-201ENST00000381140 TMCO2Q7Z6W1 182 aaPredicted RBP21.56■■□□□ 1.04
GTF3A-201ENST00000381140 CALML4Q96GE6 196 aa21.56■■□□□ 1.04
GTF3A-201ENST00000381140 FDXACB1Q9BRP7 624 aaPredicted RBP21.56■■□□□ 1.04
GTF3A-201ENST00000381140 SRPRBQ9Y5M8 271 aaKnown RBP21.56■■□□□ 1.04
GTF3A-201ENST00000381140 COL4A3BPQ9Y5P4 624 aa21.56■■□□□ 1.04
GTF3A-201ENST00000381140 SQORQ9Y6N5 450 aa21.56■■□□□ 1.04
GTF3A-201ENST00000381140 EFCAB14O75071 495 aa21.55■■□□□ 1.04
GTF3A-201ENST00000381140 CSDE1O75534 798 aaKnown RBP21.55■■□□□ 1.04
GTF3A-201ENST00000381140 SRGAP2CP0DJJ0 459 aa21.55■■□□□ 1.04
GTF3A-201ENST00000381140 NCLP19338 710 aaKnown RBP21.55■■□□□ 1.04
GTF3A-201ENST00000381140 IBSPP21815 317 aaPredicted RBP21.55■■□□□ 1.04
GTF3A-201ENST00000381140 FXR1P51114 621 aaKnown RBP eCLIP21.55■■□□□ 1.04
GTF3A-201ENST00000381140 RABGGTBP53611 331 aa21.55■■□□□ 1.04
GTF3A-201ENST00000381140 DNM1Q05193 864 aaKnown RBP21.55■■□□□ 1.04
GTF3A-201ENST00000381140 FAM117BQ6P1L5 589 aa21.55■■□□□ 1.04
GTF3A-201ENST00000381140 KRI1Q8N9T8 703 aaKnown RBP21.55■■□□□ 1.04
GTF3A-201ENST00000381140 LINC00301Q8NCQ3 95 aa21.55■■□□□ 1.04
GTF3A-201ENST00000381140 GCOM2Q9BZD3 368 aaPredicted RBP21.55■■□□□ 1.04
GTF3A-201ENST00000381140 POLR3FQ9H1D9 316 aaPredicted RBP21.55■■□□□ 1.04
GTF3A-201ENST00000381140 GPRC5CQ9NQ84 441 aa21.55■■□□□ 1.04
GTF3A-201ENST00000381140 ST3GAL5Q9UNP4 418 aa21.55■■□□□ 1.04
GTF3A-201ENST00000381140 SPTLC2O15270 562 aa21.54■■□□□ 1.04
GTF3A-201ENST00000381140 EYA4O95677 639 aa21.54■■□□□ 1.04
GTF3A-201ENST00000381140 AMHP03971 560 aa21.54■■□□□ 1.04
GTF3A-201ENST00000381140 FGFR4P22455 802 aa21.54■■□□□ 1.04
GTF3A-201ENST00000381140 LAMTOR4Q0VGL1 99 aa21.54■■□□□ 1.04
GTF3A-201ENST00000381140 KARSQ15046 597 aaKnown RBP21.54■■□□□ 1.04
GTF3A-201ENST00000381140 FAM102BQ5T8I3 360 aa21.54■■□□□ 1.04
GTF3A-201ENST00000381140 USP49Q70CQ1 688 aa21.54■■□□□ 1.04
GTF3A-201ENST00000381140 FAM228AQ86W67 206 aa21.54■■□□□ 1.04
GTF3A-201ENST00000381140 MYOCDQ8IZQ8 938 aa21.54■■□□□ 1.04
GTF3A-201ENST00000381140 ZNF710Q8N1W2 664 aa21.54■■□□□ 1.04
GTF3A-201ENST00000381140 EPSTI1Q96J88 318 aa21.54■■□□□ 1.04
GTF3A-201ENST00000381140 CHAMP1Q96JM3 812 aa21.54■■□□□ 1.04
GTF3A-201ENST00000381140 SLC9A7Q96T83 725 aa21.54■■□□□ 1.04
GTF3A-201ENST00000381140 NT5C3AQ9H0P0 336 aa21.54■■□□□ 1.04
GTF3A-201ENST00000381140 ERVK-5Q9HDB9 667 aa21.54■■□□□ 1.04
GTF3A-201ENST00000381140 GPR182O15218 404 aa21.53■■□□□ 1.04
GTF3A-201ENST00000381140 YEATS4O95619 227 aa21.53■■□□□ 1.04
GTF3A-201ENST00000381140 DARSP14868 501 aaKnown RBP21.53■■□□□ 1.04
GTF3A-201ENST00000381140 EIF4BP23588 611 aaKnown RBP21.53■■□□□ 1.04
GTF3A-201ENST00000381140 PBX2P40425 430 aa21.53■■□□□ 1.04
GTF3A-201ENST00000381140 CDC42EP1Q00587 391 aa21.53■■□□□ 1.04
GTF3A-201ENST00000381140 ODR4Q5SWX8 454 aa21.53■■□□□ 1.04
GTF3A-201ENST00000381140 ZNF410Q86VK4 478 aa21.53■■□□□ 1.04
GTF3A-201ENST00000381140 MCPH1Q8NEM0 835 aa21.53■■□□□ 1.04
GTF3A-201ENST00000381140 ASAP3Q8TDY4 903 aa21.53■■□□□ 1.04
GTF3A-201ENST00000381140 POLD4Q9HCU8 107 aa21.53■■□□□ 1.04
GTF3A-201ENST00000381140 UPP2O95045 317 aa21.52■■□□□ 1.04
GTF3A-201ENST00000381140 CYP11B2P19099 503 aa21.52■■□□□ 1.04
GTF3A-201ENST00000381140 SMAD3P84022 425 aaKnown RBP21.52■■□□□ 1.04
GTF3A-201ENST00000381140 TMEM119Q4V9L6 283 aa21.52■■□□□ 1.04
GTF3A-201ENST00000381140 HYIQ5T013 277 aa21.52■■□□□ 1.04
GTF3A-201ENST00000381140 CLEC17AQ6ZS10 378 aa21.52■■□□□ 1.04
GTF3A-201ENST00000381140 RNF149Q8NC42 400 aa21.52■■□□□ 1.04
GTF3A-201ENST00000381140 SYMPKQ92797 1274 aaKnown RBP21.52■■□□□ 1.04
GTF3A-201ENST00000381140 ZBED2Q9BTP6 218 aa21.52■■□□□ 1.04
GTF3A-201ENST00000381140 CFAP45Q9UL16 551 aa21.52■■□□□ 1.04
GTF3A-201ENST00000381140 TTC3P53804 2025 aa21.52■■□□□ 1.04
GTF3A-201ENST00000381140 LAMA2P24043 3122 aaKnown RBP21.52■■□□□ 1.03
GTF3A-201ENST00000381140 MYO9BQ13459 2157 aa21.51■■□□□ 1.03
GTF3A-201ENST00000381140 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms