RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 UBXN1Q04323 297 aa8.81□□□□□ -1
ERCC8-202ENST00000381118 GOLGA8FQ08AF8 430 aa8.81□□□□□ -1
ERCC8-202ENST00000381118 GOLGA8DPQ0D2H9 430 aa8.81□□□□□ -1
ERCC8-202ENST00000381118 BMT2Q1RMZ1 405 aa8.81□□□□□ -1
ERCC8-202ENST00000381118 DUSP28Q4G0W2 176 aa8.81□□□□□ -1
ERCC8-202ENST00000381118 CCDC40Q4G0X9 1142 aa8.81□□□□□ -1
ERCC8-202ENST00000381118 STXBP4Q6ZWJ1 553 aa8.81□□□□□ -1
ERCC8-202ENST00000381118 SYCP3Q8IZU3 236 aa8.81□□□□□ -1
ERCC8-202ENST00000381118 MCPH1Q8NEM0 835 aa8.81□□□□□ -1
ERCC8-202ENST00000381118 TRAPPC12Q8WVT3 735 aa8.81□□□□□ -1
ERCC8-202ENST00000381118 BBXQ8WY36 941 aaPredicted RBP8.81□□□□□ -1
ERCC8-202ENST00000381118 USP6NLQ92738 828 aa8.81□□□□□ -1
ERCC8-202ENST00000381118 ZBTB10Q96DT7 871 aa8.81□□□□□ -1
ERCC8-202ENST00000381118 NOC4LQ9BVI4 516 aaKnown RBP8.81□□□□□ -1
ERCC8-202ENST00000381118 TIPINQ9BVW5 301 aa8.81□□□□□ -1
ERCC8-202ENST00000381118 POLR3FQ9H1D9 316 aaPredicted RBP8.81□□□□□ -1
ERCC8-202ENST00000381118 SMARCAD1Q9H4L7 1026 aa8.81□□□□□ -1
ERCC8-202ENST00000381118 RTN4Q9NQC3 1192 aaKnown RBP8.81□□□□□ -1
ERCC8-202ENST00000381118 TYW1Q9NV66 732 aaKnown RBP8.81□□□□□ -1
ERCC8-202ENST00000381118 PCDHB13Q9Y5F0 798 aa8.81□□□□□ -1
ERCC8-202ENST00000381118 EMSYQ7Z589 1322 aa8.81□□□□□ -1
ERCC8-202ENST00000381118 TISP43B9A030 160 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 TGFB1I1O43294 461 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 CALUO43852 315 aaPredicted RBP8.8□□□□□ -1
ERCC8-202ENST00000381118 FGFR1OPO95684 399 aaKnown RBP8.8□□□□□ -1
ERCC8-202ENST00000381118 HOXC6P09630 235 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 NPTX2P47972 431 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 IRX5P78411 483 aaPredicted RBP8.8□□□□□ -1
ERCC8-202ENST00000381118 CAP1Q01518 475 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 TBC1D8BQ0IIM8 1120 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 LRMPQ12912 555 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 PLCB4Q15147 1175 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 HAUS6Q7Z4H7 955 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 MSL3Q8N5Y2 521 aaKnown RBP8.8□□□□□ -1
ERCC8-202ENST00000381118 PPTC7Q8NI37 304 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 KIFAP3Q92845 792 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 FAM167AQ96KS9 214 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 NIFKQ9BYG3 293 aaKnown RBP8.8□□□□□ -1
ERCC8-202ENST00000381118 KCNF1Q9H3M0 494 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 RNPEPQ9H4A4 650 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 SUGCTQ9HAC7 445 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 KMT5AQ9NQR1 393 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 TRAF3IP3Q9Y228 551 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 LRRC10BA6NIK2 292 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 PDXKO00764 312 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 DYNC1LI2O43237 492 aaPredicted RBP8.8□□□□□ -1
ERCC8-202ENST00000381118 PPP1R37O75864 691 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 NR3C1P04150 777 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 TPM2P07951 284 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 MMP3P08254 477 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 ZNF865P0CJ78 1059 aaPredicted RBP8.8□□□□□ -1
ERCC8-202ENST00000381118 FLT3LGP49771 235 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 SMTNP53814 917 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 PRKCZQ05513 592 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 DRP2Q13474 957 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 CEP135Q66GS9 1140 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 OLFML2BQ68BL8 750 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 SPECC1LQ69YQ0 1117 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 IQSEC1Q6DN90 963 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 PLPPR4Q7Z2D5 763 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 LRRC71Q8N4P6 559 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 ATP8B4Q8TF62 1192 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 PPP1R13LQ8WUF5 828 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 CEP89Q96ST8 783 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 DHX33Q9H6R0 707 aaKnown RBP8.8□□□□□ -1
ERCC8-202ENST00000381118 PDLIM7Q9NR12 457 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 ERAP1Q9NZ08 941 aa8.8□□□□□ -1
ERCC8-202ENST00000381118 ADGRA3Q8IWK6 1321 aa8.79□□□□□ -1
ERCC8-202ENST00000381118 DENND3A2RUS2 1198 aa8.79□□□□□ -1
ERCC8-202ENST00000381118 LRRIQ4A6NIV6 560 aa8.79□□□□□ -1
ERCC8-202ENST00000381118 TULP1O00294 542 aaPredicted RBP8.79□□□□□ -1
ERCC8-202ENST00000381118 CETN3O15182 167 aa8.79□□□□□ -1
ERCC8-202ENST00000381118 CASP4P49662 377 aa8.79□□□□□ -1
ERCC8-202ENST00000381118 VEGFBP49765 207 aa8.79□□□□□ -1
ERCC8-202ENST00000381118 CYP2J2P51589 502 aa8.79□□□□□ -1
ERCC8-202ENST00000381118 NCKAP1LP55160 1127 aa8.79□□□□□ -1
ERCC8-202ENST00000381118 SP3Q02447 781 aa8.79□□□□□ -1
ERCC8-202ENST00000381118 TARBP2Q15633 366 aaKnown RBP8.79□□□□□ -1
ERCC8-202ENST00000381118 EDRF1Q3B7T1 1238 aa8.79□□□□□ -1
ERCC8-202ENST00000381118 MIIPQ5JXC2 388 aa8.79□□□□□ -1
ERCC8-202ENST00000381118 HS2ST1Q7LGA3 356 aa8.79□□□□□ -1
ERCC8-202ENST00000381118 TLK2Q86UE8 772 aa8.79□□□□□ -1
ERCC8-202ENST00000381118 TMEM161BQ8NDZ6 487 aa8.79□□□□□ -1
ERCC8-202ENST00000381118 CACTINQ8WUQ7 758 aaKnown RBP8.79□□□□□ -1
ERCC8-202ENST00000381118 CPLX3Q8WVH0 158 aa8.79□□□□□ -1
ERCC8-202ENST00000381118 EMID1Q96A84 441 aaPredicted RBP8.79□□□□□ -1
ERCC8-202ENST00000381118 IFT74Q96LB3 600 aa8.79□□□□□ -1
ERCC8-202ENST00000381118 STRA6Q9BX79 667 aa8.79□□□□□ -1
ERCC8-202ENST00000381118 GBP3Q9H0R5 595 aa8.79□□□□□ -1
ERCC8-202ENST00000381118 TRIP12Q14669 1992 aaPredicted RBP8.79□□□□□ -1
ERCC8-202ENST00000381118 CASP8AP2Q9UKL3 1982 aa8.79□□□□□ -1
ERCC8-202ENST00000381118 ZBTB42B2RXF5 422 aa8.78□□□□□ -1
ERCC8-202ENST00000381118 H3BRB1 525 aa8.78□□□□□ -1
ERCC8-202ENST00000381118 MAPTP10636 758 aaKnown RBP8.78□□□□□ -1
ERCC8-202ENST00000381118 MSNP26038 577 aaKnown RBP8.78□□□□□ -1
ERCC8-202ENST00000381118 RFC5P40937 340 aa8.78□□□□□ -1
ERCC8-202ENST00000381118 SLC26A2P50443 739 aa8.78□□□□□ -1
ERCC8-202ENST00000381118 ADKP55263 362 aaKnown RBP8.78□□□□□ -1
ERCC8-202ENST00000381118 GTF2BQ00403 316 aa8.78□□□□□ -1
ERCC8-202ENST00000381118 HS1BP3Q53T59 392 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms