RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 ABCC1P33527 1531 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 SCAF11Q99590 1463 aaKnown RBP11.5□□□□□ -0.57
CLCN4-202ENST00000380833 PNMA6EA0A0J9YXQ4 647 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 KLRF2D3W0D1 207 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 MYL1P05976 194 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 OCM2P0CE71 109 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 OCMP0CE72 109 aaPredicted RBP11.5□□□□□ -0.57
CLCN4-202ENST00000380833 PPP2R2AP63151 447 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 ARHGEF6Q15052 776 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 CNGA3Q16281 694 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 PGBD3Q8N328 593 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 ZNF496Q96IT1 587 aaPredicted RBP11.5□□□□□ -0.57
CLCN4-202ENST00000380833 FAM161BQ96MY7 647 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 PLAAQ9Y263 795 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 SH3GLB1Q9Y371 365 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 SOS1Q07889 1333 aaPredicted RBP11.5□□□□□ -0.57
CLCN4-202ENST00000380833 UPP2O95045 317 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 BFSP1Q12934 665 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 ANKRD36BP1Q96IX9 119 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 ZFYVE1Q9HBF4 777 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 SARS2Q9NP81 518 aaKnown RBP11.49□□□□□ -0.57
CLCN4-202ENST00000380833 MAFGO15525 162 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 N4BP1O75113 896 aaKnown RBP11.49□□□□□ -0.57
CLCN4-202ENST00000380833 BAIAP3O94812 1187 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 RNF207Q6ZRF8 634 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 LRRC39Q96DD0 335 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 TTC25Q96NG3 672 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 USP26Q9BXU7 913 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 RABGEF1Q9UJ41 708 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 PCDHA1Q9Y5I3 950 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 NCOA1Q15788 1441 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 XPO1O14980 1071 aaKnown RBP11.49□□□□□ -0.57
CLCN4-202ENST00000380833 HSPA8P11142 646 aaKnown RBP11.49□□□□□ -0.57
CLCN4-202ENST00000380833 NPR1P16066 1061 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 PLD3Q8IV08 490 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 GLYCTKQ8IVS8 523 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 OR8K1Q8NGG5 319 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 ZSCAN10Q96SZ4 725 aaPredicted RBP11.49□□□□□ -0.57
CLCN4-202ENST00000380833 KIAA1024Q9UPX6 916 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 KLHL20Q9Y2M5 609 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 SNX14Q9Y5W7 946 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 SEMA3DO95025 777 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 HIPK4Q8NE63 616 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 ZC3H15Q8WU90 426 aaKnown RBP11.49□□□□□ -0.57
CLCN4-202ENST00000380833 PTPREP23469 700 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 RNF219Q5W0B1 726 aaPredicted RBP11.49□□□□□ -0.57
CLCN4-202ENST00000380833 RAPGEF5Q92565 580 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 HSPH1Q92598 858 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 POLD4Q9HCU8 107 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 MRPL40Q9NQ50 206 aaKnown RBP11.49□□□□□ -0.57
CLCN4-202ENST00000380833 PASKQ96RG2 1323 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 EIF4G3O43432 1585 aaKnown RBP11.49□□□□□ -0.57
CLCN4-202ENST00000380833 KRT72Q14CN4 511 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 ODR4Q5SWX8 454 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 CNKSR1Q969H4 720 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 RIC8AQ9NPQ8 531 aa11.49□□□□□ -0.57
CLCN4-202ENST00000380833 GSTA4O15217 222 aa11.48□□□□□ -0.57
CLCN4-202ENST00000380833 HAUS5O94927 633 aa11.48□□□□□ -0.57
CLCN4-202ENST00000380833 SERPINB2P05120 415 aa11.48□□□□□ -0.57
CLCN4-202ENST00000380833 STAT1P42224 750 aa11.48□□□□□ -0.57
CLCN4-202ENST00000380833 CCNA1P78396 465 aa11.48□□□□□ -0.57
CLCN4-202ENST00000380833 KIRREL3Q8IZU9 778 aa11.48□□□□□ -0.57
CLCN4-202ENST00000380833 PNMA1Q8ND90 353 aa11.48□□□□□ -0.57
CLCN4-202ENST00000380833 RNF14Q9UBS8 474 aa11.48□□□□□ -0.57
CLCN4-202ENST00000380833 MROH5Q6ZUA9 1318 aa11.48□□□□□ -0.57
CLCN4-202ENST00000380833 VAMP4O75379 141 aa11.48□□□□□ -0.57
CLCN4-202ENST00000380833 VCPP55072 806 aaKnown RBP11.48□□□□□ -0.57
CLCN4-202ENST00000380833 ZNF394Q53GI3 561 aa11.48□□□□□ -0.57
CLCN4-202ENST00000380833 FASTKD5Q7L8L6 764 aaKnown RBP11.48□□□□□ -0.57
CLCN4-202ENST00000380833 SRP68Q9UHB9 627 aaKnown RBP11.48□□□□□ -0.57
CLCN4-202ENST00000380833 E7EWF7 191 aa11.48□□□□□ -0.57
CLCN4-202ENST00000380833 MAP3K10Q02779 954 aa11.48□□□□□ -0.57
CLCN4-202ENST00000380833 KCNA1Q09470 495 aa11.48□□□□□ -0.57
CLCN4-202ENST00000380833 KCNB1Q14721 858 aa11.48□□□□□ -0.57
CLCN4-202ENST00000380833 R3HDM1Q15032 1099 aaKnown RBP11.48□□□□□ -0.57
CLCN4-202ENST00000380833 ADALQ6DHV7 355 aa11.48□□□□□ -0.57
CLCN4-202ENST00000380833 RINT1Q6NUQ1 792 aa11.48□□□□□ -0.57
CLCN4-202ENST00000380833 ATP8A1Q9Y2Q0 1164 aa11.48□□□□□ -0.57
CLCN4-202ENST00000380833 IPPQ9Y573 584 aa11.48□□□□□ -0.57
CLCN4-202ENST00000380833 NUMBP49757 651 aa11.48□□□□□ -0.57
CLCN4-202ENST00000380833 CCDC85BQ15834 202 aaPredicted RBP11.48□□□□□ -0.57
CLCN4-202ENST00000380833 UBE2SQ16763 222 aa11.48□□□□□ -0.57
CLCN4-202ENST00000380833 AFG1LQ8WV93 481 aa11.48□□□□□ -0.57
CLCN4-202ENST00000380833 HEXIM2Q96MH2 286 aaKnown RBP11.48□□□□□ -0.57
CLCN4-202ENST00000380833 COA7Q96BR5 231 aa11.48□□□□□ -0.57
CLCN4-202ENST00000380833 CCDC90BQ9GZT6 254 aa11.48□□□□□ -0.57
CLCN4-202ENST00000380833 IPO11Q9UI26 975 aaKnown RBP11.48□□□□□ -0.57
CLCN4-202ENST00000380833 WDR37Q9Y2I8 494 aa11.48□□□□□ -0.57
CLCN4-202ENST00000380833 GDAQ9Y2T3 454 aa11.48□□□□□ -0.57
CLCN4-202ENST00000380833 CUL1Q13616 776 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 DALRD3Q5D0E6 543 aaKnown RBP11.47□□□□□ -0.57
CLCN4-202ENST00000380833 RSBN1Q5VWQ0 802 aaPredicted RBP11.47□□□□□ -0.57
CLCN4-202ENST00000380833 FLAD1Q8NFF5 587 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 FAM192AQ9GZU8 254 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 VCPKMTQ9H867 229 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 SCAF8Q9UPN6 1271 aaKnown RBP11.47□□□□□ -0.57
CLCN4-202ENST00000380833 WDR62O43379 1518 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 PTGS2P35354 604 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 HADHAP40939 763 aa11.47□□□□□ -0.57
CLCN4-202ENST00000380833 TRIM25Q14258 630 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms