RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 CNOT7Q9UIV1 285 aaKnown RBP7.68□□□□□ -1.18
CCDC171-201ENST00000380701 KRT38O76015 456 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 ILF2Q12905 390 aaKnown RBP7.68□□□□□ -1.18
CCDC171-201ENST00000380701 CUL1Q13616 776 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 GPATCH11Q8N954 259 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 OR6J1Q8NGC5 347 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 DYNLL2Q96FJ2 89 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 RAVER2Q9HCJ3 691 aaKnown RBP7.68□□□□□ -1.18
CCDC171-201ENST00000380701 FGFR1OP2Q9NVK5 253 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 NEMP1O14524 444 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 RASGRF2O14827 1237 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 IL18RAPO95256 599 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 RARBP10826 455 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 ZNF157P51786 506 aaPredicted RBP7.68□□□□□ -1.18
CCDC171-201ENST00000380701 CDK17Q00537 523 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 MAPRE1Q15691 268 aaKnown RBP7.68□□□□□ -1.18
CCDC171-201ENST00000380701 NAALADL2Q58DX5 795 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 SGMS1Q86VZ5 419 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 CEP57Q86XR8 500 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 STKLD1Q8NE28 680 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 CALN1Q9BXU9 219 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 BARHL2Q9NY43 387 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 PDS5AQ29RF7 1337 aaKnown RBP7.68□□□□□ -1.18
CCDC171-201ENST00000380701 ZMYM2Q9UBW7 1377 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 KPNA7A9QM74 516 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 MT-ND3P03897 115 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 PSMA2P25787 234 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 RGS2P41220 211 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 MCAMP43121 646 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 DUOXA2Q1HG44 320 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 BTBD8Q5XKL5 378 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 EEPD1Q7L9B9 569 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 GPRC5AQ8NFJ5 357 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 RAD54LQ92698 747 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 IFT43Q96FT9 208 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 SUN2Q9UH99 717 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 PRKAB2O43741 272 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 CYP2C19P33261 490 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 PNPLA4P41247 253 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 THNSL1Q8IYQ7 743 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 CMTR1Q8N1G2 835 aaKnown RBP7.67□□□□□ -1.18
CCDC171-201ENST00000380701 ARRDC4Q8NCT1 418 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 LRRC37BQ96QE4 947 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 DNAJC17Q9NVM6 304 aaKnown RBP7.67□□□□□ -1.18
CCDC171-201ENST00000380701 ADAM22Q9P0K1 906 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 FRMPD1Q5SYB0 1578 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 SLC16A3O15427 465 aaKnown RBP7.67□□□□□ -1.18
CCDC171-201ENST00000380701 PCSK1P29120 753 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 AMPD2Q01433 879 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 WASHC5Q12768 1159 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 TSTA3Q13630 321 aaPredicted RBP7.67□□□□□ -1.18
CCDC171-201ENST00000380701 HAUS6Q7Z4H7 955 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 CD302Q8IX05 232 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 CHMP6Q96FZ7 201 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 SERPINI1Q99574 410 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 JPH1Q9HDC5 661 aaPredicted RBP7.67□□□□□ -1.18
CCDC171-201ENST00000380701 IP6K2Q9UHH9 426 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 CLIC4Q9Y696 253 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 TRPM1Q7Z4N2 1603 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 GGPS1O95749 300 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 SUPT20HL2P0C7V6 817 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 STAT5BP51692 787 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 ARL4CP56559 192 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 CDR2Q01850 454 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 LAMC2Q13753 1193 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 PTK2BQ14289 1009 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 CEP55Q53EZ4 464 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 ARHGAP15Q53QZ3 475 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 HSP90AA5PQ58FG0 334 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 GUF1Q8N442 669 aaKnown RBP7.67□□□□□ -1.18
CCDC171-201ENST00000380701 TBC1D16Q8TBP0 767 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 TSPYL2Q9H2G4 693 aaPredicted RBP7.67□□□□□ -1.18
CCDC171-201ENST00000380701 RPAP3Q9H6T3 665 aaPredicted RBP7.67□□□□□ -1.18
CCDC171-201ENST00000380701 SMAPO00193 183 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 EYA4O95677 639 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 TXNP10599 105 aaKnown RBP7.67□□□□□ -1.18
CCDC171-201ENST00000380701 MUTP22033 750 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 RBP5P82980 135 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 PSMD6Q15008 389 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 SDE2Q6IQ49 451 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 GLB1LQ6UWU2 654 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 GPD1LQ8N335 351 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 ASAP3Q8TDY4 903 aa7.67□□□□□ -1.18
CCDC171-201ENST00000380701 MYO1DO94832 1006 aa7.66□□□□□ -1.18
CCDC171-201ENST00000380701 CPB1P15086 417 aa7.66□□□□□ -1.18
CCDC171-201ENST00000380701 MIPOL1Q8TD10 442 aa7.66□□□□□ -1.18
CCDC171-201ENST00000380701 EFCC1Q9HA90 598 aa7.66□□□□□ -1.18
CCDC171-201ENST00000380701 NKRFO15226 690 aaKnown RBP eCLIP7.66□□□□□ -1.18
CCDC171-201ENST00000380701 SORBS3O60504 671 aa7.66□□□□□ -1.18
CCDC171-201ENST00000380701 NR3C1P04150 777 aa7.66□□□□□ -1.18
CCDC171-201ENST00000380701 PYGBP11216 843 aa7.66□□□□□ -1.18
CCDC171-201ENST00000380701 HSD17B4P51659 736 aa7.66□□□□□ -1.18
CCDC171-201ENST00000380701 PHEXP78562 749 aa7.66□□□□□ -1.18
CCDC171-201ENST00000380701 KRT17Q04695 432 aa7.66□□□□□ -1.18
CCDC171-201ENST00000380701 EHHADHQ08426 723 aa7.66□□□□□ -1.18
CCDC171-201ENST00000380701 NECTIN1Q15223 517 aa7.66□□□□□ -1.18
CCDC171-201ENST00000380701 QRICH1Q2TAL8 776 aa7.66□□□□□ -1.18
CCDC171-201ENST00000380701 LDHDQ86WU2 507 aa7.66□□□□□ -1.18
CCDC171-201ENST00000380701 SCN4BQ8IWT1 228 aa7.66□□□□□ -1.18
CCDC171-201ENST00000380701 KRT35Q92764 455 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms