RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 LNX1Q8TBB1 728 aaPredicted RBP17.75■□□□□ 0.43
VPS16-203ENST00000380469 CTNNBL1Q8WYA6 563 aaPredicted RBP17.75■□□□□ 0.43
VPS16-203ENST00000380469 NACC1Q96RE7 527 aa17.75■□□□□ 0.43
VPS16-203ENST00000380469 WDR18Q9BV38 432 aa17.75■□□□□ 0.43
VPS16-203ENST00000380469 EPN3Q9H201 632 aa17.75■□□□□ 0.43
VPS16-203ENST00000380469 SAMM50Q9Y512 469 aa17.75■□□□□ 0.43
VPS16-203ENST00000380469 NRXN2Q9P2S2 1712 aa17.74■□□□□ 0.43
VPS16-203ENST00000380469 GAS7O60861 476 aa17.74■□□□□ 0.43
VPS16-203ENST00000380469 TMEM253P0C7T8 217 aa17.74■□□□□ 0.43
VPS16-203ENST00000380469 POLR2MP0CAP2 368 aa17.74■□□□□ 0.43
VPS16-203ENST00000380469 MUTP22033 750 aa17.74■□□□□ 0.43
VPS16-203ENST00000380469 CYP2J2P51589 502 aa17.74■□□□□ 0.43
VPS16-203ENST00000380469 GUCY1A3Q02108 690 aa17.74■□□□□ 0.43
VPS16-203ENST00000380469 MTMR3Q13615 1198 aa17.74■□□□□ 0.43
VPS16-203ENST00000380469 SPATS2Q86XZ4 545 aaKnown RBP17.74■□□□□ 0.43
VPS16-203ENST00000380469 ARFGAP2Q8N6H7 521 aa17.74■□□□□ 0.43
VPS16-203ENST00000380469 SLC35G2Q8TBE7 412 aa17.74■□□□□ 0.43
VPS16-203ENST00000380469 SLC5A5Q92911 643 aa17.74■□□□□ 0.43
VPS16-203ENST00000380469 IKZF4Q9H2S9 585 aa17.74■□□□□ 0.43
VPS16-203ENST00000380469 CENPHQ9H3R5 247 aa17.74■□□□□ 0.43
VPS16-203ENST00000380469 EHMT1Q9H9B1 1298 aa17.74■□□□□ 0.43
VPS16-203ENST00000380469 SYNPO2Q9UMS6 1093 aa17.74■□□□□ 0.43
VPS16-203ENST00000380469 DIS3Q9Y2L1 958 aaKnown RBP17.74■□□□□ 0.43
VPS16-203ENST00000380469 AFF2P51816 1311 aa17.74■□□□□ 0.43
VPS16-203ENST00000380469 BHMG1C9JSJ3 638 aaPredicted RBP17.73■□□□□ 0.43
VPS16-203ENST00000380469 ENTPD3O75355 529 aa17.73■□□□□ 0.43
VPS16-203ENST00000380469 TRIM37O94972 964 aa17.73■□□□□ 0.43
VPS16-203ENST00000380469 POLD1P28340 1107 aa17.73■□□□□ 0.43
VPS16-203ENST00000380469 CTNNA1P35221 906 aaKnown RBP17.73■□□□□ 0.43
VPS16-203ENST00000380469 MDH1P40925 334 aaKnown RBP17.73■□□□□ 0.43
VPS16-203ENST00000380469 JAG1P78504 1218 aa17.73■□□□□ 0.43
VPS16-203ENST00000380469 COG2Q14746 738 aa17.73■□□□□ 0.43
VPS16-203ENST00000380469 PPP2R5AQ15172 486 aa17.73■□□□□ 0.43
VPS16-203ENST00000380469 MICALL1Q8N3F8 863 aa17.73■□□□□ 0.43
VPS16-203ENST00000380469 RFFLQ8WZ73 363 aa17.73■□□□□ 0.43
VPS16-203ENST00000380469 TDRD3Q9H7E2 651 aaKnown RBP17.73■□□□□ 0.43
VPS16-203ENST00000380469 KCND2Q9NZV8 630 aa17.73■□□□□ 0.43
VPS16-203ENST00000380469 AMACRQ9UHK6 382 aa17.73■□□□□ 0.43
VPS16-203ENST00000380469 UTP11Q9Y3A2 253 aaKnown RBP17.73■□□□□ 0.43
VPS16-203ENST00000380469 DAAM1Q9Y4D1 1078 aa17.73■□□□□ 0.43
VPS16-203ENST00000380469 NCANO14594 1321 aa17.73■□□□□ 0.43
VPS16-203ENST00000380469 ZBTB39O15060 712 aa17.73■□□□□ 0.43
VPS16-203ENST00000380469 ITGA4P13612 1032 aa17.73■□□□□ 0.43
VPS16-203ENST00000380469 TNFAIP3P21580 790 aa17.73■□□□□ 0.43
VPS16-203ENST00000380469 ITGB3BPQ13352 177 aaPredicted RBP17.73■□□□□ 0.43
VPS16-203ENST00000380469 RUFY4Q6ZNE9 571 aa17.73■□□□□ 0.43
VPS16-203ENST00000380469 KSR1Q8IVT5 923 aa17.73■□□□□ 0.43
VPS16-203ENST00000380469 PROCA1Q8NCQ7 364 aaPredicted RBP17.73■□□□□ 0.43
VPS16-203ENST00000380469 INTS2Q9H0H0 1204 aaKnown RBP17.73■□□□□ 0.43
VPS16-203ENST00000380469 ARHGEF10LQ9HCE6 1279 aa17.73■□□□□ 0.43
VPS16-203ENST00000380469 TRPC5Q9UL62 973 aaPredicted RBP17.73■□□□□ 0.43
VPS16-203ENST00000380469 ODF2LQ9ULJ1 636 aa17.73■□□□□ 0.43
VPS16-203ENST00000380469 TTC7AQ9ULT0 858 aaPredicted RBP17.73■□□□□ 0.43
VPS16-203ENST00000380469 FRMPD4Q14CM0 1322 aa17.73■□□□□ 0.43
VPS16-203ENST00000380469 A0A1W2PRG0 241 aa17.72■□□□□ 0.43
VPS16-203ENST00000380469 BUB1BO60566 1050 aaPredicted RBP17.72■□□□□ 0.43
VPS16-203ENST00000380469 PPP1R37O75864 691 aa17.72■□□□□ 0.43
VPS16-203ENST00000380469 CPP00450 1065 aa17.72■□□□□ 0.43
VPS16-203ENST00000380469 ODR4Q5SWX8 454 aa17.72■□□□□ 0.43
VPS16-203ENST00000380469 SLC30A10Q6XR72 485 aa17.72■□□□□ 0.43
VPS16-203ENST00000380469 PACS2Q86VP3 889 aa17.72■□□□□ 0.43
VPS16-203ENST00000380469 EFCC1Q9HA90 598 aa17.72■□□□□ 0.43
VPS16-203ENST00000380469 FAM114A2Q9NRY5 505 aa17.72■□□□□ 0.43
VPS16-203ENST00000380469 AGPAT3Q9NRZ7 376 aa17.72■□□□□ 0.43
VPS16-203ENST00000380469 DMAC2Q9NW81 257 aa17.72■□□□□ 0.43
VPS16-203ENST00000380469 APEX2Q9UBZ4 518 aa17.72■□□□□ 0.43
VPS16-203ENST00000380469 DAPK3O43293 454 aa17.72■□□□□ 0.43
VPS16-203ENST00000380469 ZNF131P52739 623 aa17.72■□□□□ 0.43
VPS16-203ENST00000380469 SYCP3Q8IZU3 236 aa17.72■□□□□ 0.43
VPS16-203ENST00000380469 UBLCP1Q8WVY7 318 aaPredicted RBP17.72■□□□□ 0.43
VPS16-203ENST00000380469 CSRNP1Q96S65 589 aa17.72■□□□□ 0.43
VPS16-203ENST00000380469 NAP1L3Q99457 506 aaPredicted RBP17.72■□□□□ 0.43
VPS16-203ENST00000380469 WDR11Q9BZH6 1224 aa17.72■□□□□ 0.43
VPS16-203ENST00000380469 OSGEPQ9NPF4 335 aa17.72■□□□□ 0.43
VPS16-203ENST00000380469 ATRNL1Q5VV63 1379 aa17.72■□□□□ 0.43
VPS16-203ENST00000380469 H0YGN5 161 aa17.71■□□□□ 0.43
VPS16-203ENST00000380469 TTI1O43156 1089 aa17.71■□□□□ 0.43
VPS16-203ENST00000380469 KIAA0754O94854 1291 aa17.71■□□□□ 0.43
VPS16-203ENST00000380469 ERLIN2O94905 339 aa17.71■□□□□ 0.43
VPS16-203ENST00000380469 FGGP02679 453 aa17.71■□□□□ 0.43
VPS16-203ENST00000380469 ABCB4P21439 1286 aa17.71■□□□□ 0.43
VPS16-203ENST00000380469 MYL7Q01449 175 aa17.71■□□□□ 0.43
VPS16-203ENST00000380469 BIRC3Q13489 604 aa17.71■□□□□ 0.43
VPS16-203ENST00000380469 PTGISQ16647 500 aa17.71■□□□□ 0.43
VPS16-203ENST00000380469 CBWD6Q4V339 395 aa17.71■□□□□ 0.43
VPS16-203ENST00000380469 CBWD3Q5JTY5 395 aa17.71■□□□□ 0.43
VPS16-203ENST00000380469 CBWD5Q5RIA9 395 aa17.71■□□□□ 0.43
VPS16-203ENST00000380469 CCDC174Q6PII3 467 aa17.71■□□□□ 0.43
VPS16-203ENST00000380469 MICALCLQ6ZW33 695 aa17.71■□□□□ 0.43
VPS16-203ENST00000380469 ZNF577Q9BSK1 485 aa17.71■□□□□ 0.43
VPS16-203ENST00000380469 GOPCQ9HD26 462 aa17.71■□□□□ 0.43
VPS16-203ENST00000380469 SEPT11Q9NVA2 429 aaKnown RBP17.71■□□□□ 0.43
VPS16-203ENST00000380469 NFS1Q9Y697 457 aa17.71■□□□□ 0.43
VPS16-203ENST00000380469 EXOC3O60645 756 aa17.71■□□□□ 0.43
VPS16-203ENST00000380469 INPP5BP32019 993 aa17.71■□□□□ 0.43
VPS16-203ENST00000380469 HPDP32754 393 aaPredicted RBP17.71■□□□□ 0.43
VPS16-203ENST00000380469 RRP1BQ14684 758 aaKnown RBP17.71■□□□□ 0.43
VPS16-203ENST00000380469 UAP1Q16222 522 aaPredicted RBP17.71■□□□□ 0.43
VPS16-203ENST00000380469 PPP2R5EQ16537 467 aa17.71■□□□□ 0.43
VPS16-203ENST00000380469 CEP55Q53EZ4 464 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms