RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 GNPTABQ3T906 1256 aa13.51□□□□□ -0.25
PRPF40B-202ENST00000380281 TAX1BP1Q86VP1 789 aa13.51□□□□□ -0.25
PRPF40B-202ENST00000380281 SELENOSQ9BQE4 189 aa13.51□□□□□ -0.25
PRPF40B-202ENST00000380281 RUSC1Q9BVN2 902 aa13.51□□□□□ -0.25
PRPF40B-202ENST00000380281 THRAP3Q9Y2W1 955 aaKnown RBP13.51□□□□□ -0.25
PRPF40B-202ENST00000380281 GCOM1H8Y6P7 765 aaPredicted RBP13.51□□□□□ -0.25
PRPF40B-202ENST00000380281 MYZAPP0CAP1 466 aa13.51□□□□□ -0.25
PRPF40B-202ENST00000380281 RAB27AP51159 221 aa13.51□□□□□ -0.25
PRPF40B-202ENST00000380281 ASPRV1Q53RT3 343 aa13.51□□□□□ -0.25
PRPF40B-202ENST00000380281 MEI1Q5TIA1 1274 aa13.51□□□□□ -0.25
PRPF40B-202ENST00000380281 SLFN13Q68D06 897 aa13.51□□□□□ -0.25
PRPF40B-202ENST00000380281 CCDC174Q6PII3 467 aa13.51□□□□□ -0.25
PRPF40B-202ENST00000380281 CPLX4Q7Z7G2 160 aa13.51□□□□□ -0.25
PRPF40B-202ENST00000380281 ITFG2Q969R8 447 aa13.51□□□□□ -0.25
PRPF40B-202ENST00000380281 INPP4AQ96PE3 977 aaPredicted RBP13.51□□□□□ -0.25
PRPF40B-202ENST00000380281 NAGPAQ9UK23 515 aa13.51□□□□□ -0.25
PRPF40B-202ENST00000380281 G3BP2Q9UN86 482 aaKnown RBP13.51□□□□□ -0.25
PRPF40B-202ENST00000380281 A0A1B0GUL6 1792 aa13.51□□□□□ -0.25
PRPF40B-202ENST00000380281 SSU72P8A0A1W2PR75 194 aa13.51□□□□□ -0.25
PRPF40B-202ENST00000380281 SPDYE3A6NKU9 549 aa13.51□□□□□ -0.25
PRPF40B-202ENST00000380281 TISP43B9A030 160 aa13.51□□□□□ -0.25
PRPF40B-202ENST00000380281 SMNDC1O75940 238 aaKnown RBP eCLIP13.51□□□□□ -0.25
PRPF40B-202ENST00000380281 AFPP02771 609 aaKnown RBP13.51□□□□□ -0.25
PRPF40B-202ENST00000380281 PON1P27169 355 aa13.51□□□□□ -0.25
PRPF40B-202ENST00000380281 PDIA5Q14554 519 aa13.51□□□□□ -0.25
PRPF40B-202ENST00000380281 FAM84AQ96KN4 292 aa13.51□□□□□ -0.25
PRPF40B-202ENST00000380281 PLCH1Q4KWH8 1693 aa13.5□□□□□ -0.25
PRPF40B-202ENST00000380281 LRP5O75197 1615 aa13.5□□□□□ -0.25
PRPF40B-202ENST00000380281 FAM86B1E9PN63 330 aa13.5□□□□□ -0.25
PRPF40B-202ENST00000380281 FAM86B2P0C5J1 330 aa13.5□□□□□ -0.25
PRPF40B-202ENST00000380281 PLCG2P16885 1265 aa13.5□□□□□ -0.25
PRPF40B-202ENST00000380281 IFNAR2P48551 515 aa13.5□□□□□ -0.25
PRPF40B-202ENST00000380281 PLTPP55058 493 aa13.5□□□□□ -0.25
PRPF40B-202ENST00000380281 MAGOHP61326 146 aaKnown RBP13.5□□□□□ -0.25
PRPF40B-202ENST00000380281 ARHGAP4P98171 946 aa13.5□□□□□ -0.25
PRPF40B-202ENST00000380281 TMEM119Q4V9L6 283 aa13.5□□□□□ -0.25
PRPF40B-202ENST00000380281 ZCWPW2Q504Y3 356 aa13.5□□□□□ -0.25
PRPF40B-202ENST00000380281 PALB2Q86YC2 1186 aa13.5□□□□□ -0.25
PRPF40B-202ENST00000380281 AGAP11Q8TF27 550 aa13.5□□□□□ -0.25
PRPF40B-202ENST00000380281 MAGOHBQ96A72 148 aaKnown RBP13.5□□□□□ -0.25
PRPF40B-202ENST00000380281 EBF2Q9HAK2 575 aa13.5□□□□□ -0.25
PRPF40B-202ENST00000380281 BATF3Q9NR55 127 aa13.5□□□□□ -0.25
PRPF40B-202ENST00000380281 PTPN22Q9Y2R2 807 aa13.5□□□□□ -0.25
PRPF40B-202ENST00000380281 CASZ1Q86V15 1759 aa13.5□□□□□ -0.25
PRPF40B-202ENST00000380281 ATMINO43313 823 aaPredicted RBP13.5□□□□□ -0.25
PRPF40B-202ENST00000380281 TRAPPC3O43617 180 aa13.5□□□□□ -0.25
PRPF40B-202ENST00000380281 PYGLP06737 847 aa13.5□□□□□ -0.25
PRPF40B-202ENST00000380281 H2AFZP0C0S5 128 aa13.5□□□□□ -0.25
PRPF40B-202ENST00000380281 H2AFVQ71UI9 128 aa13.5□□□□□ -0.25
PRPF40B-202ENST00000380281 MLXIPLQ9NP71 852 aa13.5□□□□□ -0.25
PRPF40B-202ENST00000380281 TAS2R14Q9NYV8 317 aa13.5□□□□□ -0.25
PRPF40B-202ENST00000380281 SNX24Q9Y343 169 aa13.5□□□□□ -0.25
PRPF40B-202ENST00000380281 NR3C1P04150 777 aa13.49□□□□□ -0.25
PRPF40B-202ENST00000380281 GALCP54803 685 aa13.49□□□□□ -0.25
PRPF40B-202ENST00000380281 CCDC38Q502W7 563 aa13.49□□□□□ -0.25
PRPF40B-202ENST00000380281 FAM133BQ5BKY9 247 aaKnown RBP13.49□□□□□ -0.25
PRPF40B-202ENST00000380281 RNF10Q8N5U6 811 aaKnown RBP13.49□□□□□ -0.25
PRPF40B-202ENST00000380281 CCT6BQ92526 530 aa13.49□□□□□ -0.25
PRPF40B-202ENST00000380281 PRCCQ92733 491 aaPredicted RBP13.49□□□□□ -0.25
PRPF40B-202ENST00000380281 NT5C3AQ9H0P0 336 aa13.49□□□□□ -0.25
PRPF40B-202ENST00000380281 NUCKS1Q9H1E3 243 aaKnown RBP13.49□□□□□ -0.25
PRPF40B-202ENST00000380281 TAF1DQ9H5J8 278 aaPredicted RBP13.49□□□□□ -0.25
PRPF40B-202ENST00000380281 CNOT8Q9UFF9 292 aaKnown RBP13.49□□□□□ -0.25
PRPF40B-202ENST00000380281 GGA2Q9UJY4 613 aa13.49□□□□□ -0.25
PRPF40B-202ENST00000380281 ROBO1Q9Y6N7 1651 aa13.49□□□□□ -0.25
PRPF40B-202ENST00000380281 EML1O00423 815 aa13.49□□□□□ -0.25
PRPF40B-202ENST00000380281 PJA2O43164 708 aa13.49□□□□□ -0.25
PRPF40B-202ENST00000380281 SHMT1P34896 483 aa13.49□□□□□ -0.25
PRPF40B-202ENST00000380281 UBAP2Q5T6F2 1119 aaKnown RBP13.49□□□□□ -0.25
PRPF40B-202ENST00000380281 IRF2BP2Q7Z5L9 587 aa13.49□□□□□ -0.25
PRPF40B-202ENST00000380281 RAPGEF5Q92565 580 aa13.49□□□□□ -0.25
PRPF40B-202ENST00000380281 KCTD10Q9H3F6 313 aa13.49□□□□□ -0.25
PRPF40B-202ENST00000380281 LRRC4BQ9NT99 713 aa13.49□□□□□ -0.25
PRPF40B-202ENST00000380281 FOXO6A8MYZ6 492 aa13.48□□□□□ -0.25
PRPF40B-202ENST00000380281 HMGB1P1B2RPK0 211 aaPredicted RBP13.48□□□□□ -0.25
PRPF40B-202ENST00000380281 FAM13AO94988 1023 aa13.48□□□□□ -0.25
PRPF40B-202ENST00000380281 CALCAP01258 141 aa13.48□□□□□ -0.25
PRPF40B-202ENST00000380281 TRAF1Q13077 416 aa13.48□□□□□ -0.25
PRPF40B-202ENST00000380281 GIT2Q14161 759 aa13.48□□□□□ -0.25
PRPF40B-202ENST00000380281 KNOP1Q1ED39 458 aaKnown RBP13.48□□□□□ -0.25
PRPF40B-202ENST00000380281 GLE1Q53GS7 698 aaKnown RBP13.48□□□□□ -0.25
PRPF40B-202ENST00000380281 PPP4R3AQ6IN85 833 aa13.48□□□□□ -0.25
PRPF40B-202ENST00000380281 CDC42EP5Q6NZY7 148 aa13.48□□□□□ -0.25
PRPF40B-202ENST00000380281 ZNF662Q6ZS27 426 aa13.48□□□□□ -0.25
PRPF40B-202ENST00000380281 CPNE8Q86YQ8 564 aa13.48□□□□□ -0.25
PRPF40B-202ENST00000380281 SYCP3Q8IZU3 236 aa13.48□□□□□ -0.25
PRPF40B-202ENST00000380281 CCDC63Q8NA47 563 aa13.48□□□□□ -0.25
PRPF40B-202ENST00000380281 MGARPQ8TDB4 240 aa13.48□□□□□ -0.25
PRPF40B-202ENST00000380281 LRRC27Q9C0I9 530 aa13.48□□□□□ -0.25
PRPF40B-202ENST00000380281 GANQ9H2C0 597 aa13.48□□□□□ -0.25
PRPF40B-202ENST00000380281 GDF3Q9NR23 364 aa13.48□□□□□ -0.25
PRPF40B-202ENST00000380281 DDTLA6NHG4 134 aaPredicted RBP13.48□□□□□ -0.25
PRPF40B-202ENST00000380281 HLA-DOAP06340 250 aa13.48□□□□□ -0.25
PRPF40B-202ENST00000380281 PRLRP16471 622 aa13.48□□□□□ -0.25
PRPF40B-202ENST00000380281 GKAP1Q5VSY0 366 aaPredicted RBP13.48□□□□□ -0.25
PRPF40B-202ENST00000380281 PPP1R9AQ9ULJ8 1098 aa13.48□□□□□ -0.25
PRPF40B-202ENST00000380281 PGRMC1O00264 195 aaKnown RBP13.48□□□□□ -0.25
PRPF40B-202ENST00000380281 DDX3XO00571 662 aaKnown RBP eCLIP13.48□□□□□ -0.25
PRPF40B-202ENST00000380281 EVI5O60447 810 aa13.48□□□□□ -0.25
PRPF40B-202ENST00000380281 HOXD13P35453 343 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms