RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 GCNT4Q9P109 453 aa16.24■□□□□ 0.19
PRNP-201ENST00000379440 MYH11P35749 1972 aa16.24■□□□□ 0.19
PRNP-201ENST00000379440 TISP43B9A030 160 aa16.24■□□□□ 0.19
PRNP-201ENST00000379440 RBAK-RBAKDNI3L0D1 243 aa16.24■□□□□ 0.19
PRNP-201ENST00000379440 PJA2O43164 708 aa16.24■□□□□ 0.19
PRNP-201ENST00000379440 BUB1O43683 1085 aa16.24■□□□□ 0.19
PRNP-201ENST00000379440 PPP1R37O75864 691 aa16.24■□□□□ 0.19
PRNP-201ENST00000379440 TMEM132BQ14DG7 1078 aa16.24■□□□□ 0.19
PRNP-201ENST00000379440 ICE2Q659A1 982 aa16.24■□□□□ 0.19
PRNP-201ENST00000379440 GBP6Q6ZN66 633 aa16.24■□□□□ 0.19
PRNP-201ENST00000379440 STXBP4Q6ZWJ1 553 aa16.24■□□□□ 0.19
PRNP-201ENST00000379440 IRF2BP2Q7Z5L9 587 aa16.24■□□□□ 0.19
PRNP-201ENST00000379440 TRIM58Q8NG06 486 aa16.24■□□□□ 0.19
PRNP-201ENST00000379440 RBM46Q8TBY0 533 aaKnown RBP16.24■□□□□ 0.19
PRNP-201ENST00000379440 DMAC2Q9NW81 257 aa16.24■□□□□ 0.19
PRNP-201ENST00000379440 ZNF214Q9UL59 606 aaPredicted RBP16.24■□□□□ 0.19
PRNP-201ENST00000379440 ANO9A1A5B4 782 aa16.23■□□□□ 0.19
PRNP-201ENST00000379440 NFIL3Q16649 462 aa16.23■□□□□ 0.19
PRNP-201ENST00000379440 KRT222Q8N1A0 295 aa16.23■□□□□ 0.19
PRNP-201ENST00000379440 SAMD3Q8N6K7 520 aa16.23■□□□□ 0.19
PRNP-201ENST00000379440 GPRC5CQ9NQ84 441 aa16.23■□□□□ 0.19
PRNP-201ENST00000379440 DBR1Q9UK59 544 aaKnown RBP16.23■□□□□ 0.19
PRNP-201ENST00000379440 PARP14Q460N5 1801 aa16.23■□□□□ 0.19
PRNP-201ENST00000379440 BACH1O14867 736 aa16.23■□□□□ 0.19
PRNP-201ENST00000379440 NR3C2P08235 984 aa16.23■□□□□ 0.19
PRNP-201ENST00000379440 FDX1P10109 184 aa16.23■□□□□ 0.19
PRNP-201ENST00000379440 NPEPPSP55786 919 aa16.23■□□□□ 0.19
PRNP-201ENST00000379440 PTK2Q05397 1052 aa16.23■□□□□ 0.19
PRNP-201ENST00000379440 SLC18A3Q16572 532 aa16.23■□□□□ 0.19
PRNP-201ENST00000379440 PLA2G4FQ68DD2 849 aa16.23■□□□□ 0.19
PRNP-201ENST00000379440 VSIG10LQ86VR7 867 aa16.23■□□□□ 0.19
PRNP-201ENST00000379440 MSANTD4Q8NCY6 345 aa16.23■□□□□ 0.19
PRNP-201ENST00000379440 JRKLQ9Y4A0 524 aa16.23■□□□□ 0.19
PRNP-201ENST00000379440 UBE4BO95155 1302 aa16.23■□□□□ 0.19
PRNP-201ENST00000379440 COL11A1P12107 1806 aaPredicted RBP16.23■□□□□ 0.19
PRNP-201ENST00000379440 PDE2AO00408 941 aaPredicted RBP16.22■□□□□ 0.19
PRNP-201ENST00000379440 TRIM49P0CI25 452 aa16.22■□□□□ 0.19
PRNP-201ENST00000379440 TRIM49CP0CI26 452 aa16.22■□□□□ 0.19
PRNP-201ENST00000379440 PACSIN1Q9BY11 444 aa16.22■□□□□ 0.19
PRNP-201ENST00000379440 RASSF4Q9H2L5 321 aa16.22■□□□□ 0.19
PRNP-201ENST00000379440 PCIF1Q9H4Z3 704 aa16.22■□□□□ 0.19
PRNP-201ENST00000379440 LARSQ9P2J5 1176 aaKnown RBP16.22■□□□□ 0.19
PRNP-201ENST00000379440 ADAMTS5Q9UNA0 930 aa16.22■□□□□ 0.19
PRNP-201ENST00000379440 TELO2Q9Y4R8 837 aa16.22■□□□□ 0.19
PRNP-201ENST00000379440 RLFQ13129 1914 aa16.22■□□□□ 0.19
PRNP-201ENST00000379440 SASH3O75995 380 aa16.22■□□□□ 0.19
PRNP-201ENST00000379440 NAP1L1P55209 391 aaKnown RBP16.22■□□□□ 0.19
PRNP-201ENST00000379440 ZNF571Q7Z3V5 609 aaPredicted RBP16.22■□□□□ 0.19
PRNP-201ENST00000379440 DNAAF5Q86Y56 855 aa16.22■□□□□ 0.19
PRNP-201ENST00000379440 C12orf42Q96LP6 360 aa16.22■□□□□ 0.19
PRNP-201ENST00000379440 CCDC43Q96MW1 224 aaKnown RBP16.22■□□□□ 0.19
PRNP-201ENST00000379440 PSMB7Q99436 277 aa16.22■□□□□ 0.19
PRNP-201ENST00000379440 FRMD4BQ9Y2L6 1034 aa16.22■□□□□ 0.19
PRNP-201ENST00000379440 MYH10P35580 1976 aa16.22■□□□□ 0.19
PRNP-201ENST00000379440 SSC5DA1L4H1 1573 aa16.22■□□□□ 0.19
PRNP-201ENST00000379440 C19orf81C9J6K1 198 aa16.22■□□□□ 0.19
PRNP-201ENST00000379440 NCK2O43639 380 aa16.22■□□□□ 0.19
PRNP-201ENST00000379440 PPP1R12BO60237 982 aaPredicted RBP16.22■□□□□ 0.19
PRNP-201ENST00000379440 EXOC3O60645 756 aa16.22■□□□□ 0.19
PRNP-201ENST00000379440 LYPLA2O95372 231 aa16.22■□□□□ 0.19
PRNP-201ENST00000379440 TBC1D8O95759 1140 aa16.22■□□□□ 0.19
PRNP-201ENST00000379440 CBWD6Q4V339 395 aa16.22■□□□□ 0.19
PRNP-201ENST00000379440 CBWD3Q5JTY5 395 aa16.22■□□□□ 0.19
PRNP-201ENST00000379440 CBWD5Q5RIA9 395 aa16.22■□□□□ 0.19
PRNP-201ENST00000379440 CATSPERGQ6ZRH7 1159 aa16.22■□□□□ 0.19
PRNP-201ENST00000379440 MKNK1Q9BUB5 465 aa16.22■□□□□ 0.19
PRNP-201ENST00000379440 ARFGAP3Q9NP61 516 aa16.22■□□□□ 0.19
PRNP-201ENST00000379440 TCEAL9Q9UHQ7 104 aa16.22■□□□□ 0.19
PRNP-201ENST00000379440 PNMA2Q9UL42 364 aa16.22■□□□□ 0.19
PRNP-201ENST00000379440 WDR64B1ANS9 1081 aa16.21■□□□□ 0.19
PRNP-201ENST00000379440 SORBS3O60504 671 aa16.21■□□□□ 0.19
PRNP-201ENST00000379440 PEX10O60683 326 aa16.21■□□□□ 0.19
PRNP-201ENST00000379440 CCND2P30279 289 aa16.21■□□□□ 0.19
PRNP-201ENST00000379440 FMO5P49326 533 aa16.21■□□□□ 0.19
PRNP-201ENST00000379440 PSMC5P62195 406 aa16.21■□□□□ 0.19
PRNP-201ENST00000379440 IQCEQ6IPM2 695 aa16.21■□□□□ 0.19
PRNP-201ENST00000379440 C4orf19Q8IY42 314 aa16.21■□□□□ 0.19
PRNP-201ENST00000379440 ST7Q9NRC1 585 aa16.21■□□□□ 0.19
PRNP-201ENST00000379440 SNX12Q9UMY4 172 aa16.21■□□□□ 0.19
PRNP-201ENST00000379440 RGS20O76081 388 aa16.21■□□□□ 0.18
PRNP-201ENST00000379440 PLS3P13797 630 aa16.21■□□□□ 0.18
PRNP-201ENST00000379440 KLRC1P26715 233 aa16.21■□□□□ 0.18
PRNP-201ENST00000379440 CXCR5P32302 372 aa16.21■□□□□ 0.18
PRNP-201ENST00000379440 XKR9Q5GH70 373 aa16.21■□□□□ 0.18
PRNP-201ENST00000379440 CAGE1Q8TC20 777 aa16.21■□□□□ 0.18
PRNP-201ENST00000379440 COG1Q8WTW3 980 aa16.21■□□□□ 0.18
PRNP-201ENST00000379440 ALS2CR12Q96Q35 445 aa16.21■□□□□ 0.18
PRNP-201ENST00000379440 RAB21Q9UL25 225 aa16.21■□□□□ 0.18
PRNP-201ENST00000379440 AFG3L2Q9Y4W6 797 aa16.21■□□□□ 0.18
PRNP-201ENST00000379440 PHIPQ8WWQ0 1821 aa16.2■□□□□ 0.18
PRNP-201ENST00000379440 CCDC151A5D8V7 595 aa16.2■□□□□ 0.18
PRNP-201ENST00000379440 PLA2G4AP47712 749 aa16.2■□□□□ 0.18
PRNP-201ENST00000379440 JAK3P52333 1124 aa16.2■□□□□ 0.18
PRNP-201ENST00000379440 PEX3P56589 373 aa16.2■□□□□ 0.18
PRNP-201ENST00000379440 VSNL1P62760 191 aa16.2■□□□□ 0.18
PRNP-201ENST00000379440 KRT76Q01546 638 aa16.2■□□□□ 0.18
PRNP-201ENST00000379440 KIAA0753Q2KHM9 967 aa16.2■□□□□ 0.18
PRNP-201ENST00000379440 NFRKBQ6P4R8 1299 aa16.2■□□□□ 0.18
PRNP-201ENST00000379440 GPC2Q8N158 579 aa16.2■□□□□ 0.18
PRNP-201ENST00000379440 ZSWIM2Q8NEG5 633 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms