RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 ZFAND2BQ8WV99 257 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 INPP5DQ92835 1189 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 SLCO2A1Q92959 643 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 KLHL29Q96CT2 875 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 SPDL1Q96EA4 605 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 RPS6KC1Q96S38 1066 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 ELAC2Q9BQ52 826 aaKnown RBP8.88□□□□□ -0.99
PTPRR-203ENST00000378778 AP1M1Q9BXS5 423 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 RIOX1Q9H6W3 641 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 EMILIN3Q9NT22 766 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 PACSIN2Q9UNF0 486 aaPredicted RBP8.88□□□□□ -0.99
PTPRR-203ENST00000378778 ZNF652Q9Y2D9 606 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 ZBTB1Q9Y2K1 713 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 LRRC42Q9Y546 428 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 STRCQ7RTU9 1775 aa8.88□□□□□ -0.99
PTPRR-203ENST00000378778 FGGP02679 453 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 LDHCP07864 332 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 NEFHP12036 1026 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 MAN1A1P33908 653 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 FLT3P36888 993 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 MSH2P43246 934 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 ADCY7P51828 1080 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 MAP2K1Q02750 393 aaPredicted RBP8.87□□□□□ -0.99
PTPRR-203ENST00000378778 PLS1Q14651 629 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 ACCSLQ4AC99 568 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 MOXD1Q6UVY6 613 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 DYMQ7RTS9 669 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 TBC1D1Q86TI0 1168 aaPredicted RBP8.87□□□□□ -0.99
PTPRR-203ENST00000378778 JAMLQ86YT9 394 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 FAM84BQ96KN1 310 aaPredicted RBP8.87□□□□□ -0.99
PTPRR-203ENST00000378778 TMEM47Q9BQJ4 181 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 MKNK1Q9BUB5 465 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 PRKAG3Q9UGI9 489 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 BAZ2BQ9UIF8 2168 aaKnown RBP8.87□□□□□ -0.99
PTPRR-203ENST00000378778 NKRFO15226 690 aaKnown RBP eCLIP8.87□□□□□ -0.99
PTPRR-203ENST00000378778 HIP1RO75146 1068 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 NPTXRO95502 500 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 BAG3O95817 575 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 XRCC5P13010 732 aaKnown RBP8.87□□□□□ -0.99
PTPRR-203ENST00000378778 CTNNA2P26232 953 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 PON1P27169 355 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 RASSF2P50749 326 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 ALDH5A1P51649 535 aaPredicted RBP8.87□□□□□ -0.99
PTPRR-203ENST00000378778 EPHA7Q15375 998 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 ASPRV1Q53RT3 343 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 WASHC2DQ5SRD0 308 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 C12orf50Q8NA57 414 aaPredicted RBP8.87□□□□□ -0.99
PTPRR-203ENST00000378778 NEDD1Q8NHV4 660 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 ZNF384Q8TF68 577 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 CKAP2Q8WWK9 683 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 CTNNBL1Q8WYA6 563 aaPredicted RBP8.87□□□□□ -0.99
PTPRR-203ENST00000378778 ZFATQ9P243 1243 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 PLIN4Q96Q06 1357 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 DDX60LQ5H9U9 1706 aaKnown RBP8.87□□□□□ -0.99
PTPRR-203ENST00000378778 UBE4BO95155 1302 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 ROBO1Q9Y6N7 1651 aa8.87□□□□□ -0.99
PTPRR-203ENST00000378778 UBAP1LF5GYI3 381 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 PPP1R12BO60237 982 aaPredicted RBP8.86□□□□□ -0.99
PTPRR-203ENST00000378778 UBOX5O94941 541 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 RPSAP08865 295 aaKnown RBP8.86□□□□□ -0.99
PTPRR-203ENST00000378778 PTGIRP43119 386 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 SLC18A1P54219 525 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 TRAF1Q13077 416 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 NR1H3Q13133 447 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 SLC35G1Q2M3R5 365 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 ZDHHC24Q6UX98 284 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 CLEC4GQ6UXB4 293 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 PPP1R21Q6ZMI0 780 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 SPATA21Q7Z572 469 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 EGFL6Q8IUX8 553 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 RIBC1Q8N443 379 aaPredicted RBP8.86□□□□□ -0.99
PTPRR-203ENST00000378778 MAIP1Q8WWC4 291 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 EEF2KMTQ96G04 330 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 STK33Q9BYT3 514 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 FOXP3Q9BZS1 431 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 AZI2Q9H6S1 392 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 WDR70Q9NW82 654 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 MCM9Q9NXL9 1143 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 WHRNQ9P202 907 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 KLHL14Q9P2G3 628 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 MTUS1Q9ULD2 1270 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 PASKQ96RG2 1323 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 ANKRD62A6NC57 917 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 SPDYE3A6NKU9 549 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 DCDC2CA8MYV0 355 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 IGF2BP3O00425 579 aaKnown RBP eCLIP8.86□□□□□ -0.99
PTPRR-203ENST00000378778 RIPK2O43353 540 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 EVI5O60447 810 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 MTA2O94776 668 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 SNUPNO95149 360 aaKnown RBP8.86□□□□□ -0.99
PTPRR-203ENST00000378778 TTLL1O95922 423 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 ITGA4P13612 1032 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 CNGA1P29973 690 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 RNASE9P60153 205 aaKnown RBP8.86□□□□□ -0.99
PTPRR-203ENST00000378778 AUHQ13825 339 aaKnown RBP8.86□□□□□ -0.99
PTPRR-203ENST00000378778 ZRSR2Q15696 482 aaKnown RBP8.86□□□□□ -0.99
PTPRR-203ENST00000378778 PDCD2Q16342 344 aaPredicted RBP8.86□□□□□ -0.99
PTPRR-203ENST00000378778 ZNF568Q3ZCX4 644 aa8.86□□□□□ -0.99
PTPRR-203ENST00000378778 NAIF1Q69YI7 327 aaPredicted RBP8.86□□□□□ -0.99
PTPRR-203ENST00000378778 EPM2AIP1Q7L775 607 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms