RNA–Protein interactions for RNA: ENST00000378513.7

RER1-203, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-203ENST00000378513 VEZTQ9HBM0 779 aa16.75■□□□□ 0.27
RER1-203ENST00000378513 SHOX2O60902 331 aaPredicted RBP16.75■□□□□ 0.27
RER1-203ENST00000378513 RAD17O75943 681 aa16.75■□□□□ 0.27
RER1-203ENST00000378513 HSD17B3P37058 310 aa16.75■□□□□ 0.27
RER1-203ENST00000378513 Q4G0T1 1027 aa16.75■□□□□ 0.27
RER1-203ENST00000378513 SLC35G2Q8TBE7 412 aa16.75■□□□□ 0.27
RER1-203ENST00000378513 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.75■□□□□ 0.271e-6■□□□□ 10.4
RER1-203ENST00000378513 A0A087WUV0 522 aaPredicted RBP16.74■□□□□ 0.27
RER1-203ENST00000378513 MYO1FO00160 1098 aa16.74■□□□□ 0.27
RER1-203ENST00000378513 ATP2C2O75185 946 aa16.74■□□□□ 0.27
RER1-203ENST00000378513 EYA4O95677 639 aa16.74■□□□□ 0.27
RER1-203ENST00000378513 ECHS1P30084 290 aa16.74■□□□□ 0.27
RER1-203ENST00000378513 UAP1Q16222 522 aaPredicted RBP16.74■□□□□ 0.27
RER1-203ENST00000378513 ALS2CLQ60I27 953 aa16.74■□□□□ 0.27
RER1-203ENST00000378513 THAP2Q9H0W7 228 aa16.74■□□□□ 0.27
RER1-203ENST00000378513 FBXL5Q9UKA1 691 aa16.74■□□□□ 0.27
RER1-203ENST00000378513 ZNF831Q5JPB2 1677 aa16.74■□□□□ 0.27
RER1-203ENST00000378513 GOLGA8IPA6NC78 632 aa16.74■□□□□ 0.27
RER1-203ENST00000378513 GOLGA8JA6NMD2 632 aa16.74■□□□□ 0.27
RER1-203ENST00000378513 EXOC3O60645 756 aa16.74■□□□□ 0.27
RER1-203ENST00000378513 NR1D1P20393 614 aa16.74■□□□□ 0.27
RER1-203ENST00000378513 RPL13P26373 211 aaKnown RBP16.74■□□□□ 0.27
RER1-203ENST00000378513 STAT1P42224 750 aa16.74■□□□□ 0.27
RER1-203ENST00000378513 UBAP2Q5T6F2 1119 aaKnown RBP16.74■□□□□ 0.27
RER1-203ENST00000378513 TATDN1Q6P1N9 297 aa16.74■□□□□ 0.27
RER1-203ENST00000378513 PPP4R3CPQ6ZMV5 832 aa16.74■□□□□ 0.27
RER1-203ENST00000378513 HSD17B14Q9BPX1 270 aa16.74■□□□□ 0.27
RER1-203ENST00000378513 SUGT1Q9Y2Z0 365 aa16.74■□□□□ 0.27
RER1-203ENST00000378513 PGRMC1O00264 195 aaKnown RBP16.73■□□□□ 0.27
RER1-203ENST00000378513 SORBS3O60504 671 aa16.73■□□□□ 0.27
RER1-203ENST00000378513 MARCKSL1P49006 195 aa16.73■□□□□ 0.27
RER1-203ENST00000378513 STAT2P52630 851 aa16.73■□□□□ 0.27
RER1-203ENST00000378513 MMS22LQ6ZRQ5 1243 aa16.73■□□□□ 0.27
RER1-203ENST00000378513 PODNQ7Z5L7 613 aa16.73■□□□□ 0.27
RER1-203ENST00000378513 CPXCR1Q8N123 301 aa16.73■□□□□ 0.27
RER1-203ENST00000378513 UNC45AQ9H3U1 944 aa16.73■□□□□ 0.27
RER1-203ENST00000378513 TAF1DQ9H5J8 278 aaPredicted RBP16.73■□□□□ 0.27
RER1-203ENST00000378513 PARVGQ9HBI0 331 aa16.73■□□□□ 0.27
RER1-203ENST00000378513 F8VZ95 297 aa16.73■□□□□ 0.27
RER1-203ENST00000378513 FOXN3O00409 490 aaPredicted RBP16.73■□□□□ 0.27
RER1-203ENST00000378513 ALDH1B1P30837 517 aa16.73■□□□□ 0.27
RER1-203ENST00000378513 CTNNA1P35221 906 aaKnown RBP16.73■□□□□ 0.27
RER1-203ENST00000378513 FMO5P49326 533 aa16.73■□□□□ 0.27
RER1-203ENST00000378513 C1orf186Q6ZWK4 172 aa16.73■□□□□ 0.27
RER1-203ENST00000378513 PHLDB2Q86SQ0 1253 aa16.73■□□□□ 0.27
RER1-203ENST00000378513 ZC3H3Q8IXZ2 948 aaKnown RBP16.73■□□□□ 0.27
RER1-203ENST00000378513 FAM20AQ96MK3 541 aa16.73■□□□□ 0.27
RER1-203ENST00000378513 NAP1L4Q99733 375 aaKnown RBP16.73■□□□□ 0.27
RER1-203ENST00000378513 ZNF577Q9BSK1 485 aa16.73■□□□□ 0.27
RER1-203ENST00000378513 GOPCQ9HD26 462 aa16.73■□□□□ 0.27
RER1-203ENST00000378513 ERVK-5Q9HDB9 667 aa16.73■□□□□ 0.27
RER1-203ENST00000378513 PLCB1Q9NQ66 1216 aa16.73■□□□□ 0.27
RER1-203ENST00000378513 PSMC2P35998 433 aaKnown RBP16.72■□□□□ 0.27
RER1-203ENST00000378513 GCLMP48507 274 aa16.72■□□□□ 0.27
RER1-203ENST00000378513 ODF2Q5BJF6 829 aa16.72■□□□□ 0.27
RER1-203ENST00000378513 BTBD6Q96KE9 485 aa16.72■□□□□ 0.27
RER1-203ENST00000378513 KIAA0754O94854 1291 aa16.72■□□□□ 0.27
RER1-203ENST00000378513 JAM2P57087 298 aa16.72■□□□□ 0.27
RER1-203ENST00000378513 GLE1Q53GS7 698 aaKnown RBP16.72■□□□□ 0.27
RER1-203ENST00000378513 DCAF12L1Q5VU92 463 aa16.72■□□□□ 0.27
RER1-203ENST00000378513 PHLDB3Q6NSJ2 640 aa16.72■□□□□ 0.27
RER1-203ENST00000378513 NT5DC3Q86UY8 548 aa16.72■□□□□ 0.27
RER1-203ENST00000378513 MASTLQ96GX5 879 aa16.72■□□□□ 0.27
RER1-203ENST00000378513 AGBL1Q96MI9 1066 aa16.72■□□□□ 0.27
RER1-203ENST00000378513 LXNQ9BS40 222 aa16.72■□□□□ 0.27
RER1-203ENST00000378513 GPRC5CQ9NQ84 441 aa16.72■□□□□ 0.27
RER1-203ENST00000378513 SCN9AQ15858 1988 aa16.72■□□□□ 0.27
RER1-203ENST00000378513 LSP1P33241 339 aa16.72■□□□□ 0.27
RER1-203ENST00000378513 VPS36Q86VN1 386 aa16.72■□□□□ 0.27
RER1-203ENST00000378513 IL31RAQ8NI17 732 aa16.72■□□□□ 0.27
RER1-203ENST00000378513 MYCBPQ99417 103 aaPredicted RBP16.72■□□□□ 0.27
RER1-203ENST00000378513 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.72■□□□□ 0.27
RER1-203ENST00000378513 AGPAT3Q9NRZ7 376 aa16.72■□□□□ 0.27
RER1-203ENST00000378513 COG5Q9UP83 839 aa16.72■□□□□ 0.27
RER1-203ENST00000378513 ATP8A1Q9Y2Q0 1164 aa16.72■□□□□ 0.27
RER1-203ENST00000378513 HIP1RO75146 1068 aa16.71■□□□□ 0.27
RER1-203ENST00000378513 SOX5P35711 763 aa16.71■□□□□ 0.27
RER1-203ENST00000378513 GRIPAP1Q4V328 841 aa16.71■□□□□ 0.27
RER1-203ENST00000378513 SCFD2Q8WU76 684 aa16.71■□□□□ 0.27
RER1-203ENST00000378513 JPH2Q9BR39 696 aaPredicted RBP16.71■□□□□ 0.27
RER1-203ENST00000378513 CBWD1Q9BRT8 395 aa16.71■□□□□ 0.27
RER1-203ENST00000378513 INTS2Q9H0H0 1204 aaKnown RBP16.71■□□□□ 0.27
RER1-203ENST00000378513 GLT8D2Q9H1C3 349 aa16.71■□□□□ 0.27
RER1-203ENST00000378513 UBR3Q6ZT12 1888 aa16.71■□□□□ 0.27
RER1-203ENST00000378513 E7EVH7 732 aa16.71■□□□□ 0.27
RER1-203ENST00000378513 HNRNPH1P31943 449 aaKnown RBP16.71■□□□□ 0.27
RER1-203ENST00000378513 HDLBPQ00341 1268 aaKnown RBP16.71■□□□□ 0.27
RER1-203ENST00000378513 MCTP2Q6DN12 878 aa16.71■□□□□ 0.27
RER1-203ENST00000378513 KRT27Q7Z3Y8 459 aa16.71■□□□□ 0.27
RER1-203ENST00000378513 OLIG1Q8TAK6 271 aa16.71■□□□□ 0.27
RER1-203ENST00000378513 KIFC3Q9BVG8 833 aa16.71■□□□□ 0.27
RER1-203ENST00000378513 TMEM39BQ9GZU3 492 aa16.71■□□□□ 0.27
RER1-203ENST00000378513 UBE2TQ9NPD8 197 aaPredicted RBP16.71■□□□□ 0.27
RER1-203ENST00000378513 TMEM59LQ9UK28 342 aa16.71■□□□□ 0.27
RER1-203ENST00000378513 YDJCA8MPS7 323 aa16.7■□□□□ 0.26
RER1-203ENST00000378513 K7ENM7 598 aa16.7■□□□□ 0.26
RER1-203ENST00000378513 PSMD10O75832 226 aa16.7■□□□□ 0.26
RER1-203ENST00000378513 FOSP01100 380 aaPredicted RBP16.7■□□□□ 0.26
RER1-203ENST00000378513 DHX9Q08211 1270 aaKnown RBP16.7■□□□□ 0.26
RER1-203ENST00000378513 STRIP1Q5VSL9 837 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms