RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 TAF1DQ9H5J8 278 aaPredicted RBP12.12□□□□□ -0.47
RPGR-203ENST00000378505 ESYT3A0FGR9 886 aa12.12□□□□□ -0.47
RPGR-203ENST00000378505 DENND3A2RUS2 1198 aa12.12□□□□□ -0.47
RPGR-203ENST00000378505 BAG2O95816 211 aa12.12□□□□□ -0.47
RPGR-203ENST00000378505 FTLP02792 175 aaPredicted RBP12.12□□□□□ -0.47
RPGR-203ENST00000378505 ACTN1P12814 892 aa12.12□□□□□ -0.47
RPGR-203ENST00000378505 FLT1P17948 1338 aa12.12□□□□□ -0.47
RPGR-203ENST00000378505 CEP55Q53EZ4 464 aa12.12□□□□□ -0.47
RPGR-203ENST00000378505 ZNF667Q5HYK9 610 aa12.12□□□□□ -0.47
RPGR-203ENST00000378505 FRMPD1Q5SYB0 1578 aa12.12□□□□□ -0.47
RPGR-203ENST00000378505 GSPT2Q8IYD1 628 aaKnown RBP12.12□□□□□ -0.47
RPGR-203ENST00000378505 TBC1D16Q8TBP0 767 aa12.12□□□□□ -0.47
RPGR-203ENST00000378505 PYROXD1Q8WU10 500 aa12.12□□□□□ -0.47
RPGR-203ENST00000378505 RFFLQ8WZ73 363 aa12.12□□□□□ -0.47
RPGR-203ENST00000378505 SLITRK6Q9H5Y7 841 aa12.12□□□□□ -0.47
RPGR-203ENST00000378505 SLC38A10Q9HBR0 1119 aa12.12□□□□□ -0.47
RPGR-203ENST00000378505 RAVER2Q9HCJ3 691 aaKnown RBP12.12□□□□□ -0.47
RPGR-203ENST00000378505 PFASO15067 1338 aa12.12□□□□□ -0.47
RPGR-203ENST00000378505 CNTNAP5Q8WYK1 1306 aa12.12□□□□□ -0.47
RPGR-203ENST00000378505 TROAPQ12815 778 aa12.12□□□□□ -0.47
RPGR-203ENST00000378505 KRT39Q6A163 491 aa12.12□□□□□ -0.47
RPGR-203ENST00000378505 RAD9BQ6WBX8 426 aa12.12□□□□□ -0.47
RPGR-203ENST00000378505 GLYCTKQ8IVS8 523 aa12.12□□□□□ -0.47
RPGR-203ENST00000378505 CCNYQ8ND76 341 aa12.12□□□□□ -0.47
RPGR-203ENST00000378505 CRAMP1Q96RY5 1269 aa12.12□□□□□ -0.47
RPGR-203ENST00000378505 LXNQ9BS40 222 aa12.12□□□□□ -0.47
RPGR-203ENST00000378505 FBXO40Q9UH90 709 aa12.12□□□□□ -0.47
RPGR-203ENST00000378505 STXBP2Q15833 593 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 DALRD3Q5D0E6 543 aaKnown RBP12.11□□□□□ -0.47
RPGR-203ENST00000378505 NUGGCQ68CJ6 796 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 HIBCHQ6NVY1 386 aaPredicted RBP12.11□□□□□ -0.47
RPGR-203ENST00000378505 HPS3Q969F9 1004 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 KIDINS220Q9ULH0 1771 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 CASQ2O14958 399 aaPredicted RBP12.11□□□□□ -0.47
RPGR-203ENST00000378505 RASA1P20936 1047 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 CHRNA3P32297 505 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 PSMC5P62195 406 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 PRPSAP1Q14558 356 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 THNSL1Q8IYQ7 743 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 SCYL3Q8IZE3 742 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 MORC4Q8TE76 937 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 FAM167AQ96KS9 214 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 NLRP4Q96MN2 994 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 RNF146Q9NTX7 359 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 DNAJC17Q9NVM6 304 aaKnown RBP12.11□□□□□ -0.47
RPGR-203ENST00000378505 HOXC10Q9NYD6 342 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 DIP2AQ14689 1571 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 FAM187AA6NFU0 413 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 SH3BP5O60239 455 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 FDX1P10109 184 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 SAT1P21673 171 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 PTPAQ15257 358 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 MAPK6Q16659 721 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 TRIM68Q6AZZ1 485 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 SCARA5Q6ZMJ2 495 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 TXLNGQ9NUQ3 528 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 MYO1CO00159 1063 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 STXBP3O00186 592 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 TRIM49P0CI25 452 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 TRIM49CP0CI26 452 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 ANXA13P27216 316 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 CAV1Q03135 178 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 MAP7Q14244 749 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 SLC18A3Q16572 532 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 GBP7Q8N8V2 638 aaPredicted RBP12.11□□□□□ -0.47
RPGR-203ENST00000378505 ZNF564Q8TBZ8 553 aaPredicted RBP12.11□□□□□ -0.47
RPGR-203ENST00000378505 HEXIM2Q96MH2 286 aaKnown RBP12.11□□□□□ -0.47
RPGR-203ENST00000378505 FAM213AQ9BRX8 229 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 LRRC4Q9HBW1 653 aa12.11□□□□□ -0.47
RPGR-203ENST00000378505 SMARCA1P28370 1054 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 SOX5P35711 763 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 ASPHQ12797 758 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 RBM43Q6ZSC3 357 aaKnown RBP12.1□□□□□ -0.47
RPGR-203ENST00000378505 TUFT1Q9NNX1 390 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 AGPAT5Q9NUQ2 364 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 TBX3O15119 743 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 GPC4O75487 556 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 ZBED1O96006 694 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 PSMA2P25787 234 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 ITKQ08881 620 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 C16orf86Q6ZW13 317 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 ENOSF1Q7L5Y1 443 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 TTC13Q8NBP0 860 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 NLRP7Q8WX94 980 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 ANKRD7Q92527 254 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 GBP5Q96PP8 586 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 TUBB6Q9BUF5 446 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 CCDC68Q9H2F9 335 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 MYMKA6NI61 221 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 SLC26A4O43511 780 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 MMEP08473 750 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 ECE1P42892 770 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 SESN3P58005 492 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 IFRD2Q12894 506 aaPredicted RBP12.1□□□□□ -0.47
RPGR-203ENST00000378505 ZNF211Q13398 564 aaPredicted RBP12.1□□□□□ -0.47
RPGR-203ENST00000378505 TFDP2Q14188 446 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 FAM133BQ5BKY9 247 aaKnown RBP12.1□□□□□ -0.47
RPGR-203ENST00000378505 HAUS6Q7Z4H7 955 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 DNAAF3Q8N9W5 541 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 RUBCNQ92622 972 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms