RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 FAM205CA6NFA0 338 aa15.52■□□□□ 0.08
PRDM16-203ENST00000378391 TCP10L2B9ZVM9 353 aa15.52■□□□□ 0.08
PRDM16-203ENST00000378391 ACSL3O95573 720 aa15.52■□□□□ 0.08
PRDM16-203ENST00000378391 NR1H3Q13133 447 aa15.52■□□□□ 0.08
PRDM16-203ENST00000378391 ATG16L1Q676U5 607 aa15.52■□□□□ 0.08
PRDM16-203ENST00000378391 PYROXD1Q8WU10 500 aa15.52■□□□□ 0.08
PRDM16-203ENST00000378391 PPWD1Q96BP3 646 aaKnown RBP15.52■□□□□ 0.08
PRDM16-203ENST00000378391 DHX36Q9H2U1 1008 aaKnown RBP15.52■□□□□ 0.08
PRDM16-203ENST00000378391 MID2Q9UJV3 735 aa15.52■□□□□ 0.08
PRDM16-203ENST00000378391 COL15A1P39059 1388 aa15.52■□□□□ 0.08
PRDM16-203ENST00000378391 LMTK3Q96Q04 1460 aa15.52■□□□□ 0.08
PRDM16-203ENST00000378391 UBE2Q2LH0YL09 131 aa15.52■□□□□ 0.08
PRDM16-203ENST00000378391 GOLGA8SH3BPF8 625 aa15.52■□□□□ 0.08
PRDM16-203ENST00000378391 ZNF185O15231 689 aa15.52■□□□□ 0.08
PRDM16-203ENST00000378391 MED7O43513 233 aa15.52■□□□□ 0.08
PRDM16-203ENST00000378391 TBX2Q13207 712 aaPredicted RBP15.52■□□□□ 0.08
PRDM16-203ENST00000378391 PFKFB3Q16875 520 aaPredicted RBP15.52■□□□□ 0.08
PRDM16-203ENST00000378391 OSBPL9Q96SU4 736 aa15.52■□□□□ 0.08
PRDM16-203ENST00000378391 SEPT9Q9UHD8 586 aaPredicted RBP15.52■□□□□ 0.08
PRDM16-203ENST00000378391 SNX24Q9Y343 169 aa15.52■□□□□ 0.08
PRDM16-203ENST00000378391 A0A1W2PQC6 194 aa15.52■□□□□ 0.07
PRDM16-203ENST00000378391 GRID2IPA4D2P6 1211 aa15.52■□□□□ 0.07
PRDM16-203ENST00000378391 LRRC53A6NM62 1247 aa15.52■□□□□ 0.07
PRDM16-203ENST00000378391 NBPF26B4DH59 902 aa15.52■□□□□ 0.07
PRDM16-203ENST00000378391 KDM1AO60341 852 aa15.52■□□□□ 0.07
PRDM16-203ENST00000378391 PMS1P54277 932 aaKnown RBP15.52■□□□□ 0.07
PRDM16-203ENST00000378391 NBPF15Q8N660 670 aa15.52■□□□□ 0.07
PRDM16-203ENST00000378391 WDR46O15213 610 aaKnown RBP15.52■□□□□ 0.07
PRDM16-203ENST00000378391 SRGAP2BP0DMP2 458 aa15.52■□□□□ 0.07
PRDM16-203ENST00000378391 CORO7P57737 925 aa15.52■□□□□ 0.07
PRDM16-203ENST00000378391 BBS9Q3SYG4 887 aa15.52■□□□□ 0.07
PRDM16-203ENST00000378391 ZNF449Q6P9G9 518 aa15.52■□□□□ 0.07
PRDM16-203ENST00000378391 CDHR1Q96JP9 859 aa15.52■□□□□ 0.07
PRDM16-203ENST00000378391 CEP170P1Q96L14 293 aa15.52■□□□□ 0.07
PRDM16-203ENST00000378391 LCMT1Q9UIC8 334 aa15.52■□□□□ 0.07
PRDM16-203ENST00000378391 XPOTO43592 962 aaKnown RBP15.51■□□□□ 0.07
PRDM16-203ENST00000378391 ACTN1P12814 892 aa15.51■□□□□ 0.07
PRDM16-203ENST00000378391 KPNA2P52292 529 aaKnown RBP15.51■□□□□ 0.07
PRDM16-203ENST00000378391 TRIP13Q15645 432 aaPredicted RBP15.51■□□□□ 0.07
PRDM16-203ENST00000378391 DARS2Q6PI48 645 aaKnown RBP15.51■□□□□ 0.07
PRDM16-203ENST00000378391 CENPKQ9BS16 269 aa15.51■□□□□ 0.07
PRDM16-203ENST00000378391 LRRIQ3A6PVS8 624 aaPredicted RBP15.51■□□□□ 0.07
PRDM16-203ENST00000378391 ARL10Q8N8L6 244 aa15.51■□□□□ 0.07
PRDM16-203ENST00000378391 CALN1Q9BXU9 219 aa15.51■□□□□ 0.07
PRDM16-203ENST00000378391 BHMT2Q9H2M3 363 aa15.51■□□□□ 0.07
PRDM16-203ENST00000378391 E9PMD0 336 aa15.51■□□□□ 0.07
PRDM16-203ENST00000378391 CAV1Q03135 178 aa15.51■□□□□ 0.07
PRDM16-203ENST00000378391 ORC2Q13416 577 aaPredicted RBP15.51■□□□□ 0.07
PRDM16-203ENST00000378391 SPICE1Q8N0Z3 855 aa15.51■□□□□ 0.07
PRDM16-203ENST00000378391 COQ7Q99807 217 aa15.51■□□□□ 0.07
PRDM16-203ENST00000378391 TLK1Q9UKI8 766 aa15.51■□□□□ 0.07
PRDM16-203ENST00000378391 TLR3O15455 904 aaKnown RBP15.51■□□□□ 0.07
PRDM16-203ENST00000378391 CCDC15Q0P6D6 951 aa15.51■□□□□ 0.07
PRDM16-203ENST00000378391 ALX1Q15699 326 aa15.51■□□□□ 0.07
PRDM16-203ENST00000378391 DYNLL2Q96FJ2 89 aa15.51■□□□□ 0.07
PRDM16-203ENST00000378391 SERPINI1Q99574 410 aa15.51■□□□□ 0.07
PRDM16-203ENST00000378391 CSADQ9Y600 493 aa15.51■□□□□ 0.07
PRDM16-203ENST00000378391 GOLGA8CPA6NN73 597 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 BBOX1O75936 387 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 RHOBTB1O94844 696 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.5■□□□□ 0.075e-8■■■■■ 65.3
PRDM16-203ENST00000378391 DNAJC12Q9UKB3 198 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 ZNF18P17022 549 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 PPP2R2AP63151 447 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 UBXN2AP68543 259 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 MECOMQ03112 1051 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 ITKQ08881 620 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 PCGF5Q86SE9 256 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 FOXP4Q8IVH2 680 aaPredicted RBP15.5■□□□□ 0.07
PRDM16-203ENST00000378391 SYNE4Q8N205 404 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.5■□□□□ 0.07
PRDM16-203ENST00000378391 USP17L3A6NCW0 530 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 USP17L4A6NCW7 530 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 ARL4AP40617 200 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 ERVK-24P63145 666 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 DYNLT1P63172 113 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 USP17L1Q7RTZ2 530 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 SYT2Q8N9I0 419 aaPredicted RBP15.5■□□□□ 0.07
PRDM16-203ENST00000378391 FLAD1Q8NFF5 587 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 ANO3Q9BYT9 981 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 SMYD2Q9NRG4 433 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 MRPS15P82914 257 aaKnown RBP15.5■□□□□ 0.07
PRDM16-203ENST00000378391 FAM83BQ5T0W9 1011 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 RAB44Q7Z6P3 723 aaPredicted RBP15.5■□□□□ 0.07
PRDM16-203ENST00000378391 APLFQ8IW19 511 aaPredicted RBP15.5■□□□□ 0.07
PRDM16-203ENST00000378391 PRPF38AQ8NAV1 312 aaKnown RBP15.5■□□□□ 0.07
PRDM16-203ENST00000378391 KCTD6Q8NC69 237 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 EDEM3Q9BZQ6 932 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 PACSIN2Q9UNF0 486 aaPredicted RBP15.5■□□□□ 0.07
PRDM16-203ENST00000378391 TTI1O43156 1089 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 KRT37O76014 449 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 MAGOHP61326 146 aaKnown RBP15.5■□□□□ 0.07
PRDM16-203ENST00000378391 AP3B2Q13367 1082 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 UBE2SQ16763 222 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 EXOC8Q8IYI6 725 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 RUBCNQ92622 972 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 TRIM63Q969Q1 353 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 TRIM56Q9BRZ2 755 aaKnown RBP15.5■□□□□ 0.07
PRDM16-203ENST00000378391 CAPN11Q9UMQ6 739 aa15.5■□□□□ 0.07
PRDM16-203ENST00000378391 HNRNPCL2B2RXH8 293 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms