RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 HYIQ5T013 277 aa13.03□□□□□ -0.32
DEPDC4-202ENST00000378244 C16orf59Q7L2K0 433 aa13.03□□□□□ -0.32
DEPDC4-202ENST00000378244 TMEM40Q8WWA1 233 aa13.03□□□□□ -0.32
DEPDC4-202ENST00000378244 STAMQ92783 540 aa13.03□□□□□ -0.32
DEPDC4-202ENST00000378244 CELF4Q9BZC1 486 aaKnown RBP13.03□□□□□ -0.32
DEPDC4-202ENST00000378244 UBE2OQ9C0C9 1292 aaKnown RBP13.03□□□□□ -0.32
DEPDC4-202ENST00000378244 BLOC1S4Q9NUP1 217 aa13.03□□□□□ -0.32
DEPDC4-202ENST00000378244 TRIOBPQ9H2D6 2365 aa13.03□□□□□ -0.32
DEPDC4-202ENST00000378244 MYH15Q9Y2K3 1946 aa13.03□□□□□ -0.32
DEPDC4-202ENST00000378244 SZT2Q5T011 3432 aa13.02□□□□□ -0.32
DEPDC4-202ENST00000378244 NPHP3-ACAD11A0A0J9YXS1 232 aa13.02□□□□□ -0.32
DEPDC4-202ENST00000378244 SFI1A8K8P3 1242 aa13.02□□□□□ -0.32
DEPDC4-202ENST00000378244 STAT6P42226 847 aa13.02□□□□□ -0.32
DEPDC4-202ENST00000378244 NFX1Q12986 1120 aaKnown RBP13.02□□□□□ -0.32
DEPDC4-202ENST00000378244 NME8Q8N427 588 aa13.02□□□□□ -0.32
DEPDC4-202ENST00000378244 LINC01465Q8N7H1 131 aa13.02□□□□□ -0.32
DEPDC4-202ENST00000378244 PSPC1Q8WXF1 523 aaKnown RBP13.02□□□□□ -0.32
DEPDC4-202ENST00000378244 DHX58Q96C10 678 aa13.02□□□□□ -0.32
DEPDC4-202ENST00000378244 JPH2Q9BR39 696 aaPredicted RBP13.02□□□□□ -0.32
DEPDC4-202ENST00000378244 MORC2Q9Y6X9 1032 aaPredicted RBP13.02□□□□□ -0.32
DEPDC4-202ENST00000378244 A0A087WZ62 844 aa13.02□□□□□ -0.33
DEPDC4-202ENST00000378244 GOLGA6L4A6NEF3 574 aa13.02□□□□□ -0.33
DEPDC4-202ENST00000378244 POLR2DO15514 142 aaKnown RBP13.02□□□□□ -0.33
DEPDC4-202ENST00000378244 RBL2Q08999 1139 aa13.02□□□□□ -0.33
DEPDC4-202ENST00000378244 NAALADL2Q58DX5 795 aa13.02□□□□□ -0.33
DEPDC4-202ENST00000378244 ADALQ6DHV7 355 aa13.02□□□□□ -0.33
DEPDC4-202ENST00000378244 RINT1Q6NUQ1 792 aa13.02□□□□□ -0.33
DEPDC4-202ENST00000378244 ZNF365Q70YC5 407 aa13.02□□□□□ -0.33
DEPDC4-202ENST00000378244 DBF4BQ8NFT6 615 aa13.02□□□□□ -0.33
DEPDC4-202ENST00000378244 LARP4BQ92615 738 aaKnown RBP13.02□□□□□ -0.33
DEPDC4-202ENST00000378244 GDF15Q99988 308 aa13.02□□□□□ -0.33
DEPDC4-202ENST00000378244 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.02□□□□□ -0.33
DEPDC4-202ENST00000378244 FDXACB1Q9BRP7 624 aaPredicted RBP13.02□□□□□ -0.33
DEPDC4-202ENST00000378244 AGO3Q9H9G7 860 aaKnown RBP13.02□□□□□ -0.33
DEPDC4-202ENST00000378244 COL4A3BPQ9Y5P4 624 aa13.02□□□□□ -0.33
DEPDC4-202ENST00000378244 TCHHQ07283 1943 aa13.02□□□□□ -0.33
DEPDC4-202ENST00000378244 CDH23Q9H251 3354 aa13.02□□□□□ -0.33
DEPDC4-202ENST00000378244 GPR32O75388 356 aa13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 CYP11B2P19099 503 aa13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 IBSPP21815 317 aaPredicted RBP13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 FGFR4P22455 802 aa13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 GPC3P51654 580 aa13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 SLC12A3P55017 1021 aa13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 LAMTOR4Q0VGL1 99 aa13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 C9orf50Q5SZB4 431 aa13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 RESP18Q5W5W9 173 aa13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 RPAINQ86UA6 219 aa13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 SYT2Q8N9I0 419 aaPredicted RBP13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 RNF149Q8NC42 400 aa13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 RAD54LQ92698 747 aa13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 VWCEQ96DN2 955 aa13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 POLR3FQ9H1D9 316 aaPredicted RBP13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 FAM13BQ9NYF5 915 aa13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 TRPV2Q9Y5S1 764 aa13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 KRT18P05783 430 aaKnown RBP13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 CD52P31358 61 aa13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 MGAT3Q09327 533 aa13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 PPIGQ13427 754 aaKnown RBP eCLIP13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 LPIN1Q14693 890 aa13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 CCDC73Q6ZRK6 1079 aa13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 DYMQ7RTS9 669 aa13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 GPBP1Q86WP2 473 aa13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 EXOC8Q8IYI6 725 aa13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 ASAP3Q8TDY4 903 aa13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 TCP11Q8WWU5 503 aa13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 IFIH1Q9BYX4 1025 aaKnown RBP13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 ZHX3Q9H4I2 956 aa13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 IL23AQ9NPF7 189 aa13.01□□□□□ -0.33
DEPDC4-202ENST00000378244 TET1Q8NFU7 2136 aa13□□□□□ -0.33
DEPDC4-202ENST00000378244 CAND2O75155 1236 aa13□□□□□ -0.33
DEPDC4-202ENST00000378244 PFKFB1P16118 471 aa13□□□□□ -0.33
DEPDC4-202ENST00000378244 FBXO47Q5MNV8 452 aa13□□□□□ -0.33
DEPDC4-202ENST00000378244 C1orf186Q6ZWK4 172 aa13□□□□□ -0.33
DEPDC4-202ENST00000378244 RPUSD2Q8IZ73 545 aaKnown RBP13□□□□□ -0.33
DEPDC4-202ENST00000378244 MCPH1Q8NEM0 835 aa13□□□□□ -0.33
DEPDC4-202ENST00000378244 ADAMTS10Q9H324 1103 aa13□□□□□ -0.33
DEPDC4-202ENST00000378244 KCNH3Q9ULD8 1083 aa13□□□□□ -0.33
DEPDC4-202ENST00000378244 NOC2LQ9Y3T9 749 aaKnown RBP13□□□□□ -0.33
DEPDC4-202ENST00000378244 SCN5AQ14524 2016 aa13□□□□□ -0.33
DEPDC4-202ENST00000378244 LRRIQ4A6NIV6 560 aa13□□□□□ -0.33
DEPDC4-202ENST00000378244 ZBBXA8MT70 800 aa13□□□□□ -0.33
DEPDC4-202ENST00000378244 HIP1RO75146 1068 aa13□□□□□ -0.33
DEPDC4-202ENST00000378244 RPS6KA5O75582 802 aa13□□□□□ -0.33
DEPDC4-202ENST00000378244 FGBP02675 491 aa13□□□□□ -0.33
DEPDC4-202ENST00000378244 LIG1P18858 919 aa13□□□□□ -0.33
DEPDC4-202ENST00000378244 GLRA2P23416 452 aa13□□□□□ -0.33
DEPDC4-202ENST00000378244 EIF4BP23588 611 aaKnown RBP13□□□□□ -0.33
DEPDC4-202ENST00000378244 SHHQ15465 462 aa13□□□□□ -0.33
DEPDC4-202ENST00000378244 TCTN1Q2MV58 587 aa13□□□□□ -0.33
DEPDC4-202ENST00000378244 ARSHQ5FYA8 562 aa13□□□□□ -0.33
DEPDC4-202ENST00000378244 FAM26DQ5JW98 314 aa13□□□□□ -0.33
DEPDC4-202ENST00000378244 FSIP1Q8NA03 581 aa13□□□□□ -0.33
DEPDC4-202ENST00000378244 KIFC3Q9BVG8 833 aa13□□□□□ -0.33
DEPDC4-202ENST00000378244 PADI3Q9ULW8 664 aa13□□□□□ -0.33
DEPDC4-202ENST00000378244 COLQQ9Y215 455 aaPredicted RBP13□□□□□ -0.33
DEPDC4-202ENST00000378244 PPME1Q9Y570 386 aa13□□□□□ -0.33
DEPDC4-202ENST00000378244 RPLP2P05387 115 aaKnown RBP12.99□□□□□ -0.33
DEPDC4-202ENST00000378244 CMA1P23946 247 aa12.99□□□□□ -0.33
DEPDC4-202ENST00000378244 ARL2P36404 184 aa12.99□□□□□ -0.33
DEPDC4-202ENST00000378244 NDUFA8P51970 172 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms