RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 GGA1Q9UJY5 639 aa19.53■□□□□ 0.72
GNE-201ENST00000377902 TPX2Q9ULW0 747 aaKnown RBP19.53■□□□□ 0.72
GNE-201ENST00000377902 PLIN4Q96Q06 1357 aa19.53■□□□□ 0.72
GNE-201ENST00000377902 A0A0A6YYK5 440 aaPredicted RBP19.53■□□□□ 0.72
GNE-201ENST00000377902 RIMBP2O15034 1052 aa19.53■□□□□ 0.72
GNE-201ENST00000377902 STAT1P42224 750 aa19.53■□□□□ 0.72
GNE-201ENST00000377902 SCNN1DP51172 638 aa19.53■□□□□ 0.72
GNE-201ENST00000377902 MKRN4PQ13434 485 aaPredicted RBP19.53■□□□□ 0.72
GNE-201ENST00000377902 DRP2Q13474 957 aa19.53■□□□□ 0.72
GNE-201ENST00000377902 ERMARDQ5T6L9 678 aa19.53■□□□□ 0.72
GNE-201ENST00000377902 CNBD1Q8NA66 436 aa19.53■□□□□ 0.72
GNE-201ENST00000377902 FBXO25Q8TCJ0 367 aa19.53■□□□□ 0.72
GNE-201ENST00000377902 C18orf8Q96DM3 657 aa19.53■□□□□ 0.72
GNE-201ENST00000377902 ACTR5Q9H9F9 607 aaPredicted RBP19.53■□□□□ 0.72
GNE-201ENST00000377902 TYW1Q9NV66 732 aaKnown RBP19.53■□□□□ 0.72
GNE-201ENST00000377902 PLS1Q14651 629 aa19.52■□□□□ 0.72
GNE-201ENST00000377902 USH1GQ495M9 461 aa19.52■□□□□ 0.72
GNE-201ENST00000377902 CBWD6Q4V339 395 aa19.52■□□□□ 0.72
GNE-201ENST00000377902 CBWD3Q5JTY5 395 aa19.52■□□□□ 0.72
GNE-201ENST00000377902 CBWD5Q5RIA9 395 aa19.52■□□□□ 0.72
GNE-201ENST00000377902 CHMP6Q96FZ7 201 aa19.52■□□□□ 0.72
GNE-201ENST00000377902 A1CFQ9NQ94 594 aaKnown RBP19.52■□□□□ 0.72
GNE-201ENST00000377902 DNAJC12Q9UKB3 198 aa19.52■□□□□ 0.72
GNE-201ENST00000377902 TRIM49P0CI25 452 aa19.52■□□□□ 0.72
GNE-201ENST00000377902 TRIM49CP0CI26 452 aa19.52■□□□□ 0.72
GNE-201ENST00000377902 RPA1P27694 616 aa19.52■□□□□ 0.72
GNE-201ENST00000377902 SOX5P35711 763 aa19.52■□□□□ 0.72
GNE-201ENST00000377902 SLCO1A2P46721 670 aa19.52■□□□□ 0.72
GNE-201ENST00000377902 PTENP60484 403 aa19.52■□□□□ 0.72
GNE-201ENST00000377902 PPATQ06203 517 aa19.52■□□□□ 0.72
GNE-201ENST00000377902 SNCBQ16143 134 aa19.52■□□□□ 0.72
GNE-201ENST00000377902 ARHGAP44Q17R89 818 aa19.52■□□□□ 0.72
GNE-201ENST00000377902 DUPD1Q68J44 220 aa19.52■□□□□ 0.72
GNE-201ENST00000377902 RPGRQ92834 1020 aaKnown RBP19.52■□□□□ 0.72
GNE-201ENST00000377902 LENG9Q96B70 501 aa19.52■□□□□ 0.72
GNE-201ENST00000377902 ERP44Q9BS26 406 aa19.52■□□□□ 0.72
GNE-201ENST00000377902 GPR88Q9GZN0 384 aa19.52■□□□□ 0.72
GNE-201ENST00000377902 ADAM7Q9H2U9 754 aa19.52■□□□□ 0.72
GNE-201ENST00000377902 SWAP70Q9UH65 585 aa19.52■□□□□ 0.72
GNE-201ENST00000377902 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.52■□□□□ 0.72
GNE-201ENST00000377902 COL24A1Q17RW2 1714 aa19.51■□□□□ 0.71
GNE-201ENST00000377902 C6orf229H3BNL8 230 aa19.51■□□□□ 0.71
GNE-201ENST00000377902 EML1O00423 815 aa19.51■□□□□ 0.71
GNE-201ENST00000377902 LRRN2O75325 713 aa19.51■□□□□ 0.71
GNE-201ENST00000377902 CCDC172P0C7W6 258 aa19.51■□□□□ 0.71
GNE-201ENST00000377902 MARCKSL1P49006 195 aa19.51■□□□□ 0.71
GNE-201ENST00000377902 SLC29A2Q14542 456 aa19.51■□□□□ 0.71
GNE-201ENST00000377902 ZFPM1Q8IX07 1006 aa19.51■□□□□ 0.71
GNE-201ENST00000377902 BORCS6Q96GS4 357 aa19.51■□□□□ 0.71
GNE-201ENST00000377902 AZI2Q9H6S1 392 aa19.51■□□□□ 0.71
GNE-201ENST00000377902 DAAM1Q9Y4D1 1078 aa19.51■□□□□ 0.71
GNE-201ENST00000377902 MYO3BQ8WXR4 1341 aa19.51■□□□□ 0.71
GNE-201ENST00000377902 UBAP1LF5GYI3 381 aa19.51■□□□□ 0.71
GNE-201ENST00000377902 MMEP08473 750 aa19.51■□□□□ 0.71
GNE-201ENST00000377902 KRT13P13646 458 aa19.51■□□□□ 0.71
GNE-201ENST00000377902 FERP16591 822 aa19.51■□□□□ 0.71
GNE-201ENST00000377902 PMS2P54278 862 aa19.51■□□□□ 0.71
GNE-201ENST00000377902 KLRC3Q07444 240 aa19.51■□□□□ 0.71
GNE-201ENST00000377902 GPATCH4Q5T3I0 446 aaKnown RBP19.51■□□□□ 0.71
GNE-201ENST00000377902 ZDHHC24Q6UX98 284 aa19.51■□□□□ 0.71
GNE-201ENST00000377902 DHX37Q8IY37 1157 aaKnown RBP19.51■□□□□ 0.71
GNE-201ENST00000377902 SLFN12Q8IYM2 578 aa19.51■□□□□ 0.71
GNE-201ENST00000377902 C3orf20Q8ND61 904 aa19.51■□□□□ 0.71
GNE-201ENST00000377902 RFFLQ8WZ73 363 aa19.51■□□□□ 0.71
GNE-201ENST00000377902 SGSM3Q96HU1 749 aa19.51■□□□□ 0.71
GNE-201ENST00000377902 CCNL1Q9UK58 526 aaPredicted RBP19.51■□□□□ 0.71
GNE-201ENST00000377902 CYP3A7-CYP3A51PA0A087WV96 503 aa19.5■□□□□ 0.71
GNE-201ENST00000377902 CYP3A7P24462 503 aa19.5■□□□□ 0.71
GNE-201ENST00000377902 HOXA13P31271 388 aaPredicted RBP19.5■□□□□ 0.71
GNE-201ENST00000377902 CTTNQ14247 550 aaKnown RBP19.5■□□□□ 0.71
GNE-201ENST00000377902 PREPLQ4J6C6 727 aaPredicted RBP19.5■□□□□ 0.71
GNE-201ENST00000377902 C15orf52Q6ZUT6 534 aaKnown RBP19.5■□□□□ 0.71
GNE-201ENST00000377902 FAM186BQ8IYM0 893 aa19.5■□□□□ 0.71
GNE-201ENST00000377902 RDH13Q8NBN7 331 aa19.5■□□□□ 0.71
GNE-201ENST00000377902 CTNNBL1Q8WYA6 563 aaPredicted RBP19.5■□□□□ 0.71
GNE-201ENST00000377902 ZNF317Q96PQ6 595 aaPredicted RBP19.5■□□□□ 0.71
GNE-201ENST00000377902 FAM129AQ9BZQ8 928 aa19.5■□□□□ 0.71
GNE-201ENST00000377902 SEMA4AQ9H3S1 761 aa19.5■□□□□ 0.71
GNE-201ENST00000377902 TMEM110-MUSTN1A8MSY1 372 aa19.5■□□□□ 0.71
GNE-201ENST00000377902 RPL13P26373 211 aaKnown RBP19.5■□□□□ 0.71
GNE-201ENST00000377902 NPEPPSP55786 919 aa19.5■□□□□ 0.71
GNE-201ENST00000377902 LLGL1Q15334 1064 aa19.5■□□□□ 0.71
GNE-201ENST00000377902 JAMLQ86YT9 394 aa19.5■□□□□ 0.71
GNE-201ENST00000377902 ZDHHC14Q8IZN3 488 aa19.5■□□□□ 0.71
GNE-201ENST00000377902 KRT35Q92764 455 aa19.5■□□□□ 0.71
GNE-201ENST00000377902 METTL14Q9HCE5 456 aaKnown RBP19.5■□□□□ 0.71
GNE-201ENST00000377902 USP40Q9NVE5 1235 aa19.5■□□□□ 0.71
GNE-201ENST00000377902 GGT7Q9UJ14 662 aa19.5■□□□□ 0.71
GNE-201ENST00000377902 ZMYM2Q9UBW7 1377 aa19.49■□□□□ 0.71
GNE-201ENST00000377902 TBCAO75347 108 aaKnown RBP19.49■□□□□ 0.71
GNE-201ENST00000377902 NFIAQ12857 509 aa19.49■□□□□ 0.71
GNE-201ENST00000377902 CCDC38Q502W7 563 aa19.49■□□□□ 0.71
GNE-201ENST00000377902 TBC1D16Q8TBP0 767 aa19.49■□□□□ 0.71
GNE-201ENST00000377902 PRMT1Q99873 361 aaKnown RBP19.49■□□□□ 0.71
GNE-201ENST00000377902 RAB17Q9H0T7 212 aa19.49■□□□□ 0.71
GNE-201ENST00000377902 MCM8Q9UJA3 840 aa19.49■□□□□ 0.71
GNE-201ENST00000377902 INTUQ9ULD6 942 aa19.49■□□□□ 0.71
GNE-201ENST00000377902 KIF13BQ9NQT8 1826 aa19.49■□□□□ 0.71
GNE-201ENST00000377902 KIAA0391O15091 583 aaKnown RBP19.49■□□□□ 0.71
GNE-201ENST00000377902 MSH4O15457 936 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms