RNA–Protein interactions for RNA: ENST00000377833.8

CUBN-202, Transcript of cubilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUBN, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-202ENST00000377833 PPP2R3BQ9Y5P8 575 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 NUMA1Q14980 2115 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 LRRIQ4A6NIV6 560 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 TKTP29401 623 aaKnown RBP6.42□□□□□ -1.38
CUBN-202ENST00000377833 ME3Q16798 604 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 KCTD6Q8NC69 237 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 ECT2Q9H8V3 914 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 CYP2E1P05181 493 aaPredicted RBP6.42□□□□□ -1.38
CUBN-202ENST00000377833 MAPK4P31152 587 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 NNMTP40261 264 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 RFC5P40937 340 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 COPB1P53618 953 aaKnown RBP6.42□□□□□ -1.38
CUBN-202ENST00000377833 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.42□□□□□ -1.38
CUBN-202ENST00000377833 SUGP1Q8IWZ8 645 aaKnown RBP6.42□□□□□ -1.38
CUBN-202ENST00000377833 TTC8Q8TAM2 541 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 SRPK1Q96SB4 655 aaKnown RBP6.42□□□□□ -1.38
CUBN-202ENST00000377833 LAMB4A4D0S4 1761 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 RIMBP3CA6NJZ7 1639 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 RIMBP3BA6NNM3 1639 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 RIMBP3Q9UFD9 1639 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 ZBED1O96006 694 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 PYGMP11217 842 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 PTGDRQ13258 359 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 SPARCL1Q14515 664 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 TMED2Q15363 201 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 PREPLQ4J6C6 727 aaPredicted RBP6.42□□□□□ -1.38
CUBN-202ENST00000377833 ENAHQ8N8S7 591 aaPredicted RBP6.42□□□□□ -1.38
CUBN-202ENST00000377833 PPWD1Q96BP3 646 aaKnown RBP6.42□□□□□ -1.38
CUBN-202ENST00000377833 THOC1Q96FV9 657 aaKnown RBP6.42□□□□□ -1.38
CUBN-202ENST00000377833 NAT9Q9BTE0 207 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 ZNF653Q96CK0 615 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 OSBPL5Q9H0X9 879 aaPredicted RBP6.42□□□□□ -1.38
CUBN-202ENST00000377833 LGALS16A8MUM7 142 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 NCAM2O15394 837 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 CHRNDQ07001 517 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 PNOCQ13519 176 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 CRLF3Q8IUI8 442 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 TGFBRAP1Q8WUH2 860 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 PLEKHF1Q96S99 279 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 TSPAN18Q96SJ8 248 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 GPCPD1Q9NPB8 672 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 DPP7Q9UHL4 492 aa6.42□□□□□ -1.38
CUBN-202ENST00000377833 TMEM110-MUSTN1A8MSY1 372 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 PSMD3O43242 534 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 TAF5LO75529 589 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 RHOBTB3O94955 611 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 IFRD2Q12894 506 aaPredicted RBP6.41□□□□□ -1.38
CUBN-202ENST00000377833 LRMPQ12912 555 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 THEM5Q8N1Q8 247 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 TMEM35BQ8NCS4 154 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 CPSF3Q9UKF6 684 aaKnown RBP6.41□□□□□ -1.38
CUBN-202ENST00000377833 LRFN2Q9ULH4 789 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 PDXKO00764 312 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 HDLBPQ00341 1268 aaKnown RBP6.41□□□□□ -1.38
CUBN-202ENST00000377833 KCNH2Q12809 1159 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 SYDE2Q5VT97 1194 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 PNMA8AQ86V59 439 aaPredicted RBP6.41□□□□□ -1.38
CUBN-202ENST00000377833 SLC20A1Q8WUM9 679 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 CCDC126Q96EE4 140 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 CEP95Q96GE4 821 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 GDPD2Q9HCC8 539 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 KRT87PA6NCN2 255 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 HUS1O60921 280 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 PDIA3P30101 505 aaKnown RBP6.41□□□□□ -1.38
CUBN-202ENST00000377833 RPL22P35268 128 aaKnown RBP6.41□□□□□ -1.38
CUBN-202ENST00000377833 ANO4Q32M45 955 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 FRMD5Q7Z6J6 570 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 RIN3Q8TB24 985 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 ASAP3Q8TDY4 903 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 ZMYND12Q9H0C1 365 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 NDST4Q9H3R1 872 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 XAB2Q9HCS7 855 aaKnown RBP6.41□□□□□ -1.38
CUBN-202ENST00000377833 TLDC2A0PJX2 215 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 MAGEB2O15479 319 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 BMP3P12645 472 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 ANXA11P50995 505 aaKnown RBP6.41□□□□□ -1.38
CUBN-202ENST00000377833 THOC5Q13769 683 aaKnown RBP6.41□□□□□ -1.38
CUBN-202ENST00000377833 EZH2Q15910 746 aaKnown RBP6.41□□□□□ -1.38
CUBN-202ENST00000377833 ZNF667Q5HYK9 610 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 LRIG3Q6UXM1 1119 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 PHC3Q8NDX5 983 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 USP17L3A6NCW0 530 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 USP17L4A6NCW7 530 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 USP17L1Q7RTZ2 530 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 SPTLC3Q9NUV7 552 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 NOP53Q9NZM5 478 aaKnown RBP6.41□□□□□ -1.38
CUBN-202ENST00000377833 RCOR1Q9UKL0 485 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 CFAP99D6REC4 459 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 HOXA2O43364 376 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 MFAP3LO75121 409 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 DGAT1O75907 488 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 NDUFA10O95299 355 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 HSPA1AP0DMV8 641 aaKnown RBP6.41□□□□□ -1.38
CUBN-202ENST00000377833 HSPA1BP0DMV9 641 aaKnown RBP6.41□□□□□ -1.38
CUBN-202ENST00000377833 ZKSCAN8Q15776 578 aaPredicted RBP6.41□□□□□ -1.38
CUBN-202ENST00000377833 MMS22LQ6ZRQ5 1243 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 HDAC11Q96DB2 347 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 PITPNM2Q9BZ72 1349 aa6.41□□□□□ -1.38
CUBN-202ENST00000377833 CTNND1O60716 968 aaKnown RBP6.41□□□□□ -1.38
CUBN-202ENST00000377833 MCF2P10911 925 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms