RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 SARSP49591 514 aaKnown RBP12.94□□□□□ -0.34
SMARCE1-203ENST00000377808 MCM2P49736 904 aa12.94□□□□□ -0.34
SMARCE1-203ENST00000377808 SPIRE1Q08AE8 756 aa12.94□□□□□ -0.34
SMARCE1-203ENST00000377808 EPC2Q52LR7 807 aa12.94□□□□□ -0.34
SMARCE1-203ENST00000377808 XKR9Q5GH70 373 aa12.94□□□□□ -0.34
SMARCE1-203ENST00000377808 OTUD6AQ7L8S5 288 aa12.94□□□□□ -0.34
SMARCE1-203ENST00000377808 NOSTRINQ8IVI9 506 aa12.94□□□□□ -0.34
SMARCE1-203ENST00000377808 C4orf19Q8IY42 314 aa12.94□□□□□ -0.34
SMARCE1-203ENST00000377808 TMEM192Q8IY95 271 aa12.94□□□□□ -0.34
SMARCE1-203ENST00000377808 SAMD11Q96NU1 681 aa12.94□□□□□ -0.34
SMARCE1-203ENST00000377808 GCOM2Q9BZD3 368 aaPredicted RBP12.94□□□□□ -0.34
SMARCE1-203ENST00000377808 ADAMTS10Q9H324 1103 aa12.94□□□□□ -0.34
SMARCE1-203ENST00000377808 C1orf112Q9NSG2 853 aa12.94□□□□□ -0.34
SMARCE1-203ENST00000377808 MAFO75444 373 aaPredicted RBP12.93□□□□□ -0.34
SMARCE1-203ENST00000377808 CSDE1O75534 798 aaKnown RBP12.93□□□□□ -0.34
SMARCE1-203ENST00000377808 DGKIO75912 1065 aa12.93□□□□□ -0.34
SMARCE1-203ENST00000377808 OR52Z1P0C646 297 aa12.93□□□□□ -0.34
SMARCE1-203ENST00000377808 TECP42680 631 aa12.93□□□□□ -0.34
SMARCE1-203ENST00000377808 GATMP50440 423 aa12.93□□□□□ -0.34
SMARCE1-203ENST00000377808 GPM6BQ13491 265 aa12.93□□□□□ -0.34
SMARCE1-203ENST00000377808 NBR1Q14596 966 aa12.93□□□□□ -0.34
SMARCE1-203ENST00000377808 SPOUT1Q5T280 376 aaKnown RBP12.93□□□□□ -0.34
SMARCE1-203ENST00000377808 ZNF710Q8N1W2 664 aa12.93□□□□□ -0.34
SMARCE1-203ENST00000377808 ZNF579Q8NAF0 562 aaKnown RBP12.93□□□□□ -0.34
SMARCE1-203ENST00000377808 RNF169Q8NCN4 708 aa12.93□□□□□ -0.34
SMARCE1-203ENST00000377808 NEK9Q8TD19 979 aa12.93□□□□□ -0.34
SMARCE1-203ENST00000377808 TMEM143Q96AN5 459 aa12.93□□□□□ -0.34
SMARCE1-203ENST00000377808 MTMR9Q96QG7 549 aa12.93□□□□□ -0.34
SMARCE1-203ENST00000377808 RGS18Q9NS28 235 aa12.93□□□□□ -0.34
SMARCE1-203ENST00000377808 CHD7Q9P2D1 2997 aa12.93□□□□□ -0.34
SMARCE1-203ENST00000377808 THEGQ9P2T0 379 aa12.93□□□□□ -0.34
SMARCE1-203ENST00000377808 SMC3Q9UQE7 1217 aa12.93□□□□□ -0.34
SMARCE1-203ENST00000377808 UNC80Q8N2C7 3258 aa12.92□□□□□ -0.34
SMARCE1-203ENST00000377808 A0A087WZ62 844 aa12.92□□□□□ -0.34
SMARCE1-203ENST00000377808 TBKBP1A7MCY6 615 aa12.92□□□□□ -0.34
SMARCE1-203ENST00000377808 ZBTB39O15060 712 aa12.92□□□□□ -0.34
SMARCE1-203ENST00000377808 LPXNO60711 386 aa12.92□□□□□ -0.34
SMARCE1-203ENST00000377808 SLITRK3O94933 977 aa12.92□□□□□ -0.34
SMARCE1-203ENST00000377808 DARSP14868 501 aaKnown RBP12.92□□□□□ -0.34
SMARCE1-203ENST00000377808 SFPQP23246 707 aaKnown RBP eCLIP12.92□□□□□ -0.34
SMARCE1-203ENST00000377808 RFC5P40937 340 aa12.92□□□□□ -0.34
SMARCE1-203ENST00000377808 EMC2Q15006 297 aa12.92□□□□□ -0.34
SMARCE1-203ENST00000377808 PTPROQ16827 1216 aa12.92□□□□□ -0.34
SMARCE1-203ENST00000377808 SLC24A5Q71RS6 500 aa12.92□□□□□ -0.34
SMARCE1-203ENST00000377808 KSR1Q8IVT5 923 aa12.92□□□□□ -0.34
SMARCE1-203ENST00000377808 EXOC8Q8IYI6 725 aa12.92□□□□□ -0.34
SMARCE1-203ENST00000377808 IL27Q8NEV9 243 aa12.92□□□□□ -0.34
SMARCE1-203ENST00000377808 PSPC1Q8WXF1 523 aaKnown RBP12.92□□□□□ -0.34
SMARCE1-203ENST00000377808 CEP89Q96ST8 783 aa12.92□□□□□ -0.34
SMARCE1-203ENST00000377808 MTRQ99707 1265 aa12.92□□□□□ -0.34
SMARCE1-203ENST00000377808 FDXACB1Q9BRP7 624 aaPredicted RBP12.92□□□□□ -0.34
SMARCE1-203ENST00000377808 ATP6V0A4Q9HBG4 840 aa12.92□□□□□ -0.34
SMARCE1-203ENST00000377808 RWDD3Q9Y3V2 267 aa12.92□□□□□ -0.34
SMARCE1-203ENST00000377808 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.92□□□□□ -0.34
SMARCE1-203ENST00000377808 COL4A3BPQ9Y5P4 624 aa12.92□□□□□ -0.34
SMARCE1-203ENST00000377808 MRPL42Q9Y6G3 142 aaKnown RBP12.92□□□□□ -0.34
SMARCE1-203ENST00000377808 A0A087WWV3 80 aa12.91□□□□□ -0.34
SMARCE1-203ENST00000377808 IGKV6-21A0A0C4DH24 114 aa12.91□□□□□ -0.34
SMARCE1-203ENST00000377808 DLL1O00548 723 aa12.91□□□□□ -0.34
SMARCE1-203ENST00000377808 SRGAP2CP0DJJ0 459 aa12.91□□□□□ -0.34
SMARCE1-203ENST00000377808 TRAPPC10P48553 1259 aa12.91□□□□□ -0.34
SMARCE1-203ENST00000377808 CDC42EP1Q00587 391 aa12.91□□□□□ -0.34
SMARCE1-203ENST00000377808 ZNF410Q86VK4 478 aa12.91□□□□□ -0.34
SMARCE1-203ENST00000377808 CMTR2Q8IYT2 770 aaKnown RBP12.91□□□□□ -0.34
SMARCE1-203ENST00000377808 ERMNQ8TAM6 284 aa12.91□□□□□ -0.34
SMARCE1-203ENST00000377808 TCP11Q8WWU5 503 aa12.91□□□□□ -0.34
SMARCE1-203ENST00000377808 ZNF689Q96CS4 500 aaPredicted RBP12.91□□□□□ -0.34
SMARCE1-203ENST00000377808 RC3H2Q9HBD1 1191 aaKnown RBP12.91□□□□□ -0.34
SMARCE1-203ENST00000377808 PIN4Q9Y237 131 aaKnown RBP12.91□□□□□ -0.34
SMARCE1-203ENST00000377808 PPME1Q9Y570 386 aa12.91□□□□□ -0.34
SMARCE1-203ENST00000377808 GTF3C3Q9Y5Q9 886 aa12.91□□□□□ -0.34
SMARCE1-203ENST00000377808 TTC3P53804 2025 aa12.91□□□□□ -0.34
SMARCE1-203ENST00000377808 C9IYK1 514 aa12.9□□□□□ -0.34
SMARCE1-203ENST00000377808 H3BNC9 293 aa12.9□□□□□ -0.34
SMARCE1-203ENST00000377808 FGFR1P11362 822 aa12.9□□□□□ -0.34
SMARCE1-203ENST00000377808 ORC2Q13416 577 aaPredicted RBP12.9□□□□□ -0.34
SMARCE1-203ENST00000377808 FAM102BQ5T8I3 360 aa12.9□□□□□ -0.34
SMARCE1-203ENST00000377808 TWF2Q6IBS0 349 aaKnown RBP12.9□□□□□ -0.34
SMARCE1-203ENST00000377808 CATSPER4Q7RTX7 472 aa12.9□□□□□ -0.34
SMARCE1-203ENST00000377808 ABI1Q8IZP0 508 aa12.9□□□□□ -0.34
SMARCE1-203ENST00000377808 PIGOQ8TEQ8 1089 aa12.9□□□□□ -0.34
SMARCE1-203ENST00000377808 HSD17B14Q9BPX1 270 aa12.9□□□□□ -0.34
SMARCE1-203ENST00000377808 C11orf84Q9BUA3 381 aaPredicted RBP12.9□□□□□ -0.34
SMARCE1-203ENST00000377808 BACH2Q9BYV9 841 aa12.9□□□□□ -0.34
SMARCE1-203ENST00000377808 INO80BQ9C086 356 aaPredicted RBP12.9□□□□□ -0.34
SMARCE1-203ENST00000377808 DHX33Q9H6R0 707 aaKnown RBP12.9□□□□□ -0.34
SMARCE1-203ENST00000377808 NLRC5Q86WI3 1866 aa12.9□□□□□ -0.34
SMARCE1-203ENST00000377808 PRUNE2Q8WUY3 3088 aa12.9□□□□□ -0.34
SMARCE1-203ENST00000377808 COL4A6Q14031 1691 aa12.9□□□□□ -0.34
SMARCE1-203ENST00000377808 GAS2O43903 313 aaKnown RBP12.89□□□□□ -0.35
SMARCE1-203ENST00000377808 USO1O60763 962 aaKnown RBP12.89□□□□□ -0.35
SMARCE1-203ENST00000377808 POU3F3P20264 500 aaPredicted RBP12.89□□□□□ -0.35
SMARCE1-203ENST00000377808 U2AF2P26368 475 aaKnown RBP eCLIP12.89□□□□□ -0.358e-11■■■■□ 22.5
SMARCE1-203ENST00000377808 BMPR1AP36894 532 aa12.89□□□□□ -0.35
SMARCE1-203ENST00000377808 LAMTOR4Q0VGL1 99 aa12.89□□□□□ -0.35
SMARCE1-203ENST00000377808 DSC3Q14574 896 aa12.89□□□□□ -0.35
SMARCE1-203ENST00000377808 HAUS3Q68CZ6 603 aa12.89□□□□□ -0.35
SMARCE1-203ENST00000377808 EP400NLQ6ZTU2 488 aa12.89□□□□□ -0.35
SMARCE1-203ENST00000377808 MAEAQ7L5Y9 396 aa12.89□□□□□ -0.35
SMARCE1-203ENST00000377808 PRPF31Q8WWY3 499 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms