RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 TMEM192Q8IY95 271 aa18.83■□□□□ 0.6
HMGN4-201ENST00000377575 CMTR2Q8IYT2 770 aaKnown RBP18.83■□□□□ 0.6
HMGN4-201ENST00000377575 ZNF689Q96CS4 500 aaPredicted RBP18.83■□□□□ 0.6
HMGN4-201ENST00000377575 DYDC2Q96IM9 177 aa18.83■□□□□ 0.6
HMGN4-201ENST00000377575 CEP170P1Q96L14 293 aa18.83■□□□□ 0.6
HMGN4-201ENST00000377575 ADAM2Q99965 735 aa18.83■□□□□ 0.6
HMGN4-201ENST00000377575 SH2D3AQ9BRG2 576 aa18.83■□□□□ 0.6
HMGN4-201ENST00000377575 RGS18Q9NS28 235 aa18.83■□□□□ 0.6
HMGN4-201ENST00000377575 MGEA5O60502 916 aa18.82■□□□□ 0.6
HMGN4-201ENST00000377575 ATP2B1P20020 1258 aa18.82■□□□□ 0.6
HMGN4-201ENST00000377575 CTNNB1P35222 781 aa18.82■□□□□ 0.6
HMGN4-201ENST00000377575 RFC5P40937 340 aa18.82■□□□□ 0.6
HMGN4-201ENST00000377575 TXKP42681 527 aa18.82■□□□□ 0.6
HMGN4-201ENST00000377575 POLGP54098 1239 aaPredicted RBP18.82■□□□□ 0.6
HMGN4-201ENST00000377575 CYP4A11Q02928 519 aa18.82■□□□□ 0.6
HMGN4-201ENST00000377575 SKIV2LQ15477 1246 aaKnown RBP18.82■□□□□ 0.6
HMGN4-201ENST00000377575 PTPROQ16827 1216 aa18.82■□□□□ 0.6
HMGN4-201ENST00000377575 SLC24A5Q71RS6 500 aa18.82■□□□□ 0.6
HMGN4-201ENST00000377575 ZNF410Q86VK4 478 aa18.82■□□□□ 0.6
HMGN4-201ENST00000377575 CRIPAKQ8N1N5 446 aa18.82■□□□□ 0.6
HMGN4-201ENST00000377575 MTMR9Q96QG7 549 aa18.82■□□□□ 0.6
HMGN4-201ENST00000377575 EIF2AK1Q9BQI3 630 aaKnown RBP18.82■□□□□ 0.6
HMGN4-201ENST00000377575 GCOM2Q9BZD3 368 aaPredicted RBP18.82■□□□□ 0.6
HMGN4-201ENST00000377575 RGL1Q9NZL6 768 aa18.82■□□□□ 0.6
HMGN4-201ENST00000377575 WRAP73Q9P2S5 460 aaPredicted RBP18.82■□□□□ 0.6
HMGN4-201ENST00000377575 NOL7Q9UMY1 257 aaKnown RBP18.82■□□□□ 0.6
HMGN4-201ENST00000377575 PCDHB7Q9Y5E2 793 aa18.82■□□□□ 0.6
HMGN4-201ENST00000377575 ATG2AQ2TAZ0 1938 aa18.81■□□□□ 0.6
HMGN4-201ENST00000377575 GAS2O43903 313 aaKnown RBP18.81■□□□□ 0.6
HMGN4-201ENST00000377575 DARSP14868 501 aaKnown RBP18.81■□□□□ 0.6
HMGN4-201ENST00000377575 ZSCAN20P17040 1043 aaPredicted RBP18.81■□□□□ 0.6
HMGN4-201ENST00000377575 IBSPP21815 317 aaPredicted RBP18.81■□□□□ 0.6
HMGN4-201ENST00000377575 TRAPPC10P48553 1259 aa18.81■□□□□ 0.6
HMGN4-201ENST00000377575 NPEPPSP55786 919 aa18.81■□□□□ 0.6
HMGN4-201ENST00000377575 DRP2Q13474 957 aa18.81■□□□□ 0.6
HMGN4-201ENST00000377575 CTTNQ14247 550 aaKnown RBP18.81■□□□□ 0.6
HMGN4-201ENST00000377575 RHPN2Q8IUC4 686 aa18.81■□□□□ 0.6
HMGN4-201ENST00000377575 TPH2Q8IWU9 490 aa18.81■□□□□ 0.6
HMGN4-201ENST00000377575 CLP1Q92989 425 aaKnown RBP18.81■□□□□ 0.6
HMGN4-201ENST00000377575 TMX3Q96JJ7 454 aa18.81■□□□□ 0.6
HMGN4-201ENST00000377575 ZNF668Q96K58 619 aaPredicted RBP18.81■□□□□ 0.6
HMGN4-201ENST00000377575 SUCLA2Q9P2R7 463 aaPredicted RBP18.81■□□□□ 0.6
HMGN4-201ENST00000377575 C5orf67F2Z3F1 127 aa18.8■□□□□ 0.6
HMGN4-201ENST00000377575 H3BNC9 293 aa18.8■□□□□ 0.6
HMGN4-201ENST00000377575 RB1P06400 928 aa18.8■□□□□ 0.6
HMGN4-201ENST00000377575 SFPQP23246 707 aaKnown RBP eCLIP18.8■□□□□ 0.6
HMGN4-201ENST00000377575 GPM6BQ13491 265 aa18.8■□□□□ 0.6
HMGN4-201ENST00000377575 TTC38Q5R3I4 469 aa18.8■□□□□ 0.6
HMGN4-201ENST00000377575 ATXN2LQ8WWM7 1075 aaKnown RBP18.8■□□□□ 0.6
HMGN4-201ENST00000377575 CCDC43Q96MW1 224 aaKnown RBP18.8■□□□□ 0.6
HMGN4-201ENST00000377575 C11orf84Q9BUA3 381 aaPredicted RBP18.8■□□□□ 0.6
HMGN4-201ENST00000377575 INO80BQ9C086 356 aaPredicted RBP18.8■□□□□ 0.6
HMGN4-201ENST00000377575 TMEM60Q9H2L4 133 aa18.8■□□□□ 0.6
HMGN4-201ENST00000377575 DHX33Q9H6R0 707 aaKnown RBP18.8■□□□□ 0.6
HMGN4-201ENST00000377575 PRDM6Q9NQX0 595 aa18.8■□□□□ 0.6
HMGN4-201ENST00000377575 POTEMA6NI47 508 aa18.79■□□□□ 0.6
HMGN4-201ENST00000377575 C9IYK1 514 aa18.79■□□□□ 0.6
HMGN4-201ENST00000377575 DLL1O00548 723 aa18.79■□□□□ 0.6
HMGN4-201ENST00000377575 SLITRK3O94933 977 aa18.79■□□□□ 0.6
HMGN4-201ENST00000377575 LYPLA2O95372 231 aa18.79■□□□□ 0.6
HMGN4-201ENST00000377575 OR52Z1P0C646 297 aa18.79■□□□□ 0.6
HMGN4-201ENST00000377575 BMPR1AP36894 532 aa18.79■□□□□ 0.6
HMGN4-201ENST00000377575 DSC3Q14574 896 aa18.79■□□□□ 0.6
HMGN4-201ENST00000377575 EMC2Q15006 297 aa18.79■□□□□ 0.6
HMGN4-201ENST00000377575 PAN2Q504Q3 1202 aaKnown RBP18.79■□□□□ 0.6
HMGN4-201ENST00000377575 TIGD5Q53EQ6 642 aa18.79■□□□□ 0.6
HMGN4-201ENST00000377575 XKR9Q5GH70 373 aa18.79■□□□□ 0.6
HMGN4-201ENST00000377575 TCP11Q8WWU5 503 aa18.79■□□□□ 0.6
HMGN4-201ENST00000377575 PSPC1Q8WXF1 523 aaKnown RBP18.79■□□□□ 0.6
HMGN4-201ENST00000377575 MRPL38Q96DV4 380 aaKnown RBP18.79■□□□□ 0.6
HMGN4-201ENST00000377575 NLRP4Q96MN2 994 aa18.79■□□□□ 0.6
HMGN4-201ENST00000377575 HSD17B14Q9BPX1 270 aa18.79■□□□□ 0.6
HMGN4-201ENST00000377575 PLVAPQ9BX97 442 aa18.79■□□□□ 0.6
HMGN4-201ENST00000377575 ELAC1Q9H777 363 aaKnown RBP18.79■□□□□ 0.6
HMGN4-201ENST00000377575 TMEM161AQ9NX61 479 aa18.79■□□□□ 0.6
HMGN4-201ENST00000377575 COL4A3BPQ9Y5P4 624 aa18.79■□□□□ 0.6
HMGN4-201ENST00000377575 VCANP13611 3396 aa18.79■□□□□ 0.6
HMGN4-201ENST00000377575 SPTBN5Q9NRC6 3674 aaKnown RBP18.78■□□□□ 0.6
HMGN4-201ENST00000377575 A0A087WZ62 844 aa18.78■□□□□ 0.6
HMGN4-201ENST00000377575 HOXA2O43364 376 aa18.78■□□□□ 0.6
HMGN4-201ENST00000377575 CD2BP2O95400 341 aaKnown RBP18.78■□□□□ 0.6
HMGN4-201ENST00000377575 LINC00271P0C7V0 271 aa18.78■□□□□ 0.6
HMGN4-201ENST00000377575 U2AF2P26368 475 aaKnown RBP eCLIP18.78■□□□□ 0.61e-8■■□□□ 12
HMGN4-201ENST00000377575 ZNF174Q15697 407 aa18.78■□□□□ 0.6
HMGN4-201ENST00000377575 TJAP1Q5JTD0 557 aa18.78■□□□□ 0.6
HMGN4-201ENST00000377575 SYMPKQ92797 1274 aaKnown RBP18.78■□□□□ 0.6
HMGN4-201ENST00000377575 MTRQ99707 1265 aa18.78■□□□□ 0.6
HMGN4-201ENST00000377575 FDXACB1Q9BRP7 624 aaPredicted RBP18.78■□□□□ 0.6
HMGN4-201ENST00000377575 ATP6V0A4Q9HBG4 840 aa18.78■□□□□ 0.6
HMGN4-201ENST00000377575 DACT1Q9NYF0 836 aa18.78■□□□□ 0.6
HMGN4-201ENST00000377575 MRPL42Q9Y6G3 142 aaKnown RBP18.78■□□□□ 0.6
HMGN4-201ENST00000377575 XIRP2A4UGR9 3374 aa18.77■□□□□ 0.6
HMGN4-201ENST00000377575 MRPS5P82675 430 aaKnown RBP18.77■□□□□ 0.6
HMGN4-201ENST00000377575 AAK1Q2M2I8 961 aa18.77■□□□□ 0.6
HMGN4-201ENST00000377575 ZNF579Q8NAF0 562 aaKnown RBP18.77■□□□□ 0.6
HMGN4-201ENST00000377575 ERMNQ8TAM6 284 aa18.77■□□□□ 0.6
HMGN4-201ENST00000377575 LMAN2LQ9H0V9 348 aa18.77■□□□□ 0.6
HMGN4-201ENST00000377575 ANKEF1Q9NU02 776 aa18.77■□□□□ 0.6
HMGN4-201ENST00000377575 COG5Q9UP83 839 aa18.77■□□□□ 0.6
HMGN4-201ENST00000377575 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms