RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 SCFD2Q8WU76 684 aa15.04■□□□□ -0
SF1-205ENST00000377394 HVCN1Q96D96 273 aa15.04■□□□□ -0
SF1-205ENST00000377394 CALR3Q96L12 384 aaKnown RBP15.04■□□□□ -0
SF1-205ENST00000377394 CNOT8Q9UFF9 292 aaKnown RBP15.04■□□□□ -0
SF1-205ENST00000377394 ASTN1O14525 1302 aa15.04■□□□□ -0
SF1-205ENST00000377394 SIPA1L1O43166 1804 aa15.04■□□□□ -0
SF1-205ENST00000377394 HMGB1P1B2RPK0 211 aaPredicted RBP15.04■□□□□ -0
SF1-205ENST00000377394 TRAPPC3O43617 180 aa15.04■□□□□ -0
SF1-205ENST00000377394 CALUO43852 315 aaPredicted RBP15.04■□□□□ -0
SF1-205ENST00000377394 BUB1BO60566 1050 aaPredicted RBP15.04■□□□□ -0
SF1-205ENST00000377394 SREBF1P36956 1147 aa15.04■□□□□ -0
SF1-205ENST00000377394 CASP4P49662 377 aa15.04■□□□□ -0
SF1-205ENST00000377394 JAM2P57087 298 aa15.04■□□□□ -0
SF1-205ENST00000377394 TNNC1P63316 161 aa15.04■□□□□ -0
SF1-205ENST00000377394 ALKBH5Q6P6C2 394 aaKnown RBP15.04■□□□□ -0
SF1-205ENST00000377394 KLHL7Q8IXQ5 586 aa15.04■□□□□ -0
SF1-205ENST00000377394 TAF4BQ92750 862 aa15.04■□□□□ -0
SF1-205ENST00000377394 FBXL5Q9UKA1 691 aa15.04■□□□□ -0
SF1-205ENST00000377394 VAV3Q9UKW4 847 aa15.04■□□□□ -0
SF1-205ENST00000377394 DDTLA6NHG4 134 aaPredicted RBP15.03■□□□□ -0
SF1-205ENST00000377394 NR3C1P04150 777 aa15.03■□□□□ -0
SF1-205ENST00000377394 CRKP46108 304 aa15.03■□□□□ -0
SF1-205ENST00000377394 CACNB3P54284 484 aa15.03■□□□□ -0
SF1-205ENST00000377394 PPP1R7Q15435 360 aa15.03■□□□□ -0
SF1-205ENST00000377394 ACTRT1Q8TDG2 376 aa15.03■□□□□ -0
SF1-205ENST00000377394 SLC35C1Q96A29 364 aa15.03■□□□□ -0
SF1-205ENST00000377394 ZBTB10Q96DT7 871 aa15.03■□□□□ -0
SF1-205ENST00000377394 RSRC1Q96IZ7 334 aaKnown RBP15.03■□□□□ -0
SF1-205ENST00000377394 PBKQ96KB5 322 aa15.03■□□□□ -0
SF1-205ENST00000377394 RUSC1Q9BVN2 902 aa15.03■□□□□ -0
SF1-205ENST00000377394 AMNQ9BXJ7 453 aa15.03■□□□□ -0
SF1-205ENST00000377394 TMBIM4Q9HC24 238 aa15.03■□□□□ -0
SF1-205ENST00000377394 TYW1Q9NV66 732 aaKnown RBP15.03■□□□□ -0
SF1-205ENST00000377394 SLC12A6Q9UHW9 1150 aa15.03■□□□□ -0
SF1-205ENST00000377394 PCDHAC2Q9Y5I4 1007 aa15.03■□□□□ -0
SF1-205ENST00000377394 KIF13BQ9NQT8 1826 aa15.03■□□□□ -0
SF1-205ENST00000377394 BHMG1C9JSJ3 638 aaPredicted RBP15.03■□□□□ -0
SF1-205ENST00000377394 MSH4O15457 936 aa15.03■□□□□ -0
SF1-205ENST00000377394 TOM1O60784 492 aa15.03■□□□□ -0
SF1-205ENST00000377394 ECHS1P30084 290 aa15.03■□□□□ -0
SF1-205ENST00000377394 ERVK-9P63128 1117 aa15.03■□□□□ -0
SF1-205ENST00000377394 CERKLQ49MI3 558 aaPredicted RBP15.03■□□□□ -0
SF1-205ENST00000377394 DCAF17Q5H9S7 520 aaPredicted RBP15.03■□□□□ -0
SF1-205ENST00000377394 MAB21L3Q8N8X9 362 aa15.03■□□□□ -0
SF1-205ENST00000377394 PROCA1Q8NCQ7 364 aaPredicted RBP15.03■□□□□ -0
SF1-205ENST00000377394 TPCN2Q8NHX9 752 aa15.03■□□□□ -0
SF1-205ENST00000377394 FAM20AQ96MK3 541 aa15.03■□□□□ -0
SF1-205ENST00000377394 KLHL33A6NCF5 533 aa15.03■□□□□ -0
SF1-205ENST00000377394 DCDC2CA8MYV0 355 aa15.03■□□□□ -0
SF1-205ENST00000377394 SLC16A3O15427 465 aaKnown RBP15.03■□□□□ -0
SF1-205ENST00000377394 AP1G2O75843 785 aa15.03■□□□□ -0
SF1-205ENST00000377394 TAL1P17542 331 aaPredicted RBP15.03■□□□□ -0
SF1-205ENST00000377394 CIITAP33076 1130 aa15.03■□□□□ -0
SF1-205ENST00000377394 HSPA9P38646 679 aaKnown RBP15.03■□□□□ -0
SF1-205ENST00000377394 KCNA1Q09470 495 aa15.03■□□□□ -0
SF1-205ENST00000377394 MSL1Q68DK7 614 aa15.03■□□□□ -0
SF1-205ENST00000377394 SH3BP5LQ7L8J4 393 aa15.03■□□□□ -0
SF1-205ENST00000377394 CACNA2D3Q8IZS8 1091 aa15.03■□□□□ -0
SF1-205ENST00000377394 TCP11Q8WWU5 503 aa15.03■□□□□ -0
SF1-205ENST00000377394 RAPGEF5Q92565 580 aa15.03■□□□□ -0
SF1-205ENST00000377394 BORCS6Q96GS4 357 aa15.03■□□□□ -0
SF1-205ENST00000377394 ISCUQ9H1K1 167 aa15.03■□□□□ -0
SF1-205ENST00000377394 BHMT2Q9H2M3 363 aa15.03■□□□□ -0
SF1-205ENST00000377394 ATP8B3O60423 1300 aa15.02■□□□□ -0
SF1-205ENST00000377394 ANXA13P27216 316 aa15.02■□□□□ -0
SF1-205ENST00000377394 POLD1P28340 1107 aa15.02■□□□□ -0
SF1-205ENST00000377394 SLC8A3P57103 927 aa15.02■□□□□ -0
SF1-205ENST00000377394 TCP10Q12799 353 aa15.02■□□□□ -0
SF1-205ENST00000377394 CYP2W1Q8TAV3 490 aa15.02■□□□□ -0
SF1-205ENST00000377394 CCT6BQ92526 530 aa15.02■□□□□ -0
SF1-205ENST00000377394 ZDHHC15Q96MV8 337 aa15.02■□□□□ -0
SF1-205ENST00000377394 TAF1DQ9H5J8 278 aaPredicted RBP15.02■□□□□ -0
SF1-205ENST00000377394 METTL14Q9HCE5 456 aaKnown RBP15.02■□□□□ -0
SF1-205ENST00000377394 F5H6K3 240 aa15.02□□□□□ -0.01
SF1-205ENST00000377394 CYP4A11Q02928 519 aa15.02□□□□□ -0.01
SF1-205ENST00000377394 KLRC3Q07444 240 aa15.02□□□□□ -0.01
SF1-205ENST00000377394 IFI16Q16666 785 aaKnown RBP15.02□□□□□ -0.01
SF1-205ENST00000377394 USH1GQ495M9 461 aa15.02□□□□□ -0.01
SF1-205ENST00000377394 CDCA2Q69YH5 1023 aaPredicted RBP15.02□□□□□ -0.01
SF1-205ENST00000377394 GJB7Q6PEY0 223 aa15.02□□□□□ -0.01
SF1-205ENST00000377394 BZW1Q7L1Q6 419 aaKnown RBP15.02□□□□□ -0.01
SF1-205ENST00000377394 SLFN11Q7Z7L1 901 aa15.02□□□□□ -0.01
SF1-205ENST00000377394 EIF1ADQ8N9N8 165 aaKnown RBP15.02□□□□□ -0.01
SF1-205ENST00000377394 C1orf131Q8NDD1 294 aaKnown RBP15.02□□□□□ -0.01
SF1-205ENST00000377394 TATDN2Q93075 761 aa15.02□□□□□ -0.01
SF1-205ENST00000377394 KCNQ5Q9NR82 932 aa15.02□□□□□ -0.01
SF1-205ENST00000377394 FAM198AQ9UFP1 575 aa15.02□□□□□ -0.01
SF1-205ENST00000377394 STXBP5LQ9Y2K9 1186 aa15.02□□□□□ -0.01
SF1-205ENST00000377394 STK24Q9Y6E0 443 aa15.02□□□□□ -0.01
SF1-205ENST00000377394 SPDYE3A6NKU9 549 aa15.01□□□□□ -0.01
SF1-205ENST00000377394 EIF4E1BA6NMX2 242 aaKnown RBP15.01□□□□□ -0.01
SF1-205ENST00000377394 EML1O00423 815 aa15.01□□□□□ -0.01
SF1-205ENST00000377394 DDX3XO00571 662 aaKnown RBP eCLIP15.01□□□□□ -0.016e-44■■■■□ 22.7
SF1-205ENST00000377394 CLIC2O15247 247 aa15.01□□□□□ -0.01
SF1-205ENST00000377394 TGFB1I1O43294 461 aa15.01□□□□□ -0.01
SF1-205ENST00000377394 CEP104O60308 925 aa15.01□□□□□ -0.01
SF1-205ENST00000377394 FLOT1O75955 427 aa15.01□□□□□ -0.01
SF1-205ENST00000377394 FOSP01100 380 aaPredicted RBP15.01□□□□□ -0.01
SF1-205ENST00000377394 CLTAP09496 248 aa15.01□□□□□ -0.01
SF1-205ENST00000377394 PTPROQ16827 1216 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms