RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 FMO5P49326 533 aa27.52■■■□□ 2
C9orf40-201ENST00000376854 TTC31Q49AM3 519 aaPredicted RBP27.52■■■□□ 2
C9orf40-201ENST00000376854 GLYCTKQ8IVS8 523 aa27.52■■■□□ 2
C9orf40-201ENST00000376854 BBXQ8WY36 941 aaPredicted RBP27.52■■■□□ 2
C9orf40-201ENST00000376854 PRMT6Q96LA8 375 aaPredicted RBP27.52■■■□□ 2
C9orf40-201ENST00000376854 MKNK1Q9BUB5 465 aa27.52■■■□□ 2
C9orf40-201ENST00000376854 STK33Q9BYT3 514 aa27.52■■■□□ 2
C9orf40-201ENST00000376854 BHMG1C9JSJ3 638 aaPredicted RBP27.52■■■□□ 2
C9orf40-201ENST00000376854 PSMD10O75832 226 aa27.52■■■□□ 2
C9orf40-201ENST00000376854 CFBP00751 764 aa27.52■■■□□ 2
C9orf40-201ENST00000376854 ITGA4P13612 1032 aa27.52■■■□□ 2
C9orf40-201ENST00000376854 GUCY1A3Q02108 690 aa27.52■■■□□ 2
C9orf40-201ENST00000376854 LRIG3Q6UXM1 1119 aa27.52■■■□□ 2
C9orf40-201ENST00000376854 FLAD1Q8NFF5 587 aa27.52■■■□□ 2
C9orf40-201ENST00000376854 LRRC45Q96CN5 670 aa27.52■■■□□ 2
C9orf40-201ENST00000376854 HES6Q96HZ4 224 aa27.52■■■□□ 2
C9orf40-201ENST00000376854 DNAJC12Q9UKB3 198 aa27.52■■■□□ 2
C9orf40-201ENST00000376854 GOLGA6L10A6NI86 522 aa27.51■■□□□ 1.99
C9orf40-201ENST00000376854 LMNB1P20700 586 aa27.51■■□□□ 1.99
C9orf40-201ENST00000376854 DRAP1Q14919 205 aaPredicted RBP27.51■■□□□ 1.99
C9orf40-201ENST00000376854 STYK1Q6J9G0 422 aa27.51■■□□□ 1.99
C9orf40-201ENST00000376854 TADA2BQ86TJ2 420 aa27.51■■□□□ 1.99
C9orf40-201ENST00000376854 OLIG1Q8TAK6 271 aa27.51■■□□□ 1.99
C9orf40-201ENST00000376854 AMACRQ9UHK6 382 aa27.51■■□□□ 1.99
C9orf40-201ENST00000376854 LSP1P33241 339 aa27.51■■□□□ 1.99
C9orf40-201ENST00000376854 PPP2R5CQ13362 524 aa27.51■■□□□ 1.99
C9orf40-201ENST00000376854 PACS2Q86VP3 889 aa27.51■■□□□ 1.99
C9orf40-201ENST00000376854 NEUROG2Q9H2A3 272 aa27.51■■□□□ 1.99
C9orf40-201ENST00000376854 TMBIM4Q9HC24 238 aa27.51■■□□□ 1.99
C9orf40-201ENST00000376854 OSGEPQ9NPF4 335 aa27.51■■□□□ 1.99
C9orf40-201ENST00000376854 AMFRQ9UKV5 643 aa27.51■■□□□ 1.99
C9orf40-201ENST00000376854 STAT2P52630 851 aa27.5■■□□□ 1.99
C9orf40-201ENST00000376854 HS2ST1Q7LGA3 356 aa27.5■■□□□ 1.99
C9orf40-201ENST00000376854 ZNF720Q7Z2F6 126 aa27.5■■□□□ 1.99
C9orf40-201ENST00000376854 FIZ1Q96SL8 496 aa27.5■■□□□ 1.99
C9orf40-201ENST00000376854 SLITRK6Q9H5Y7 841 aa27.5■■□□□ 1.99
C9orf40-201ENST00000376854 CYP2J2P51589 502 aa27.5■■□□□ 1.99
C9orf40-201ENST00000376854 SLC35G2Q8TBE7 412 aa27.5■■□□□ 1.99
C9orf40-201ENST00000376854 FRMD4BQ9Y2L6 1034 aa27.5■■□□□ 1.99
C9orf40-201ENST00000376854 HMGB2P26583 209 aaKnown RBP27.49■■□□□ 1.99
C9orf40-201ENST00000376854 PRELPP51888 382 aa27.49■■□□□ 1.99
C9orf40-201ENST00000376854 ITGB3BPQ13352 177 aaPredicted RBP27.49■■□□□ 1.99
C9orf40-201ENST00000376854 UAP1Q16222 522 aaPredicted RBP27.49■■□□□ 1.99
C9orf40-201ENST00000376854 CBWD6Q4V339 395 aa27.49■■□□□ 1.99
C9orf40-201ENST00000376854 CBWD3Q5JTY5 395 aa27.49■■□□□ 1.99
C9orf40-201ENST00000376854 CBWD5Q5RIA9 395 aa27.49■■□□□ 1.99
C9orf40-201ENST00000376854 FAM178BQ8IXR5 827 aa27.49■■□□□ 1.99
C9orf40-201ENST00000376854 CCDC26Q8TAB7 109 aa27.49■■□□□ 1.99
C9orf40-201ENST00000376854 SLC5A5Q92911 643 aa27.49■■□□□ 1.99
C9orf40-201ENST00000376854 SEL1LQ9UBV2 794 aa27.49■■□□□ 1.99
C9orf40-201ENST00000376854 NCANO14594 1321 aa27.49■■□□□ 1.99
C9orf40-201ENST00000376854 FRMPD4Q14CM0 1322 aa27.49■■□□□ 1.99
C9orf40-201ENST00000376854 YDJCA8MPS7 323 aa27.49■■□□□ 1.99
C9orf40-201ENST00000376854 GCOM1H8Y6P7 765 aaPredicted RBP27.49■■□□□ 1.99
C9orf40-201ENST00000376854 BUB1BO60566 1050 aaPredicted RBP27.49■■□□□ 1.99
C9orf40-201ENST00000376854 MYZAPP0CAP1 466 aa27.49■■□□□ 1.99
C9orf40-201ENST00000376854 STXBP4Q6ZWJ1 553 aa27.49■■□□□ 1.99
C9orf40-201ENST00000376854 RFFLQ8WZ73 363 aa27.49■■□□□ 1.99
C9orf40-201ENST00000376854 CSRNP1Q96S65 589 aa27.49■■□□□ 1.99
C9orf40-201ENST00000376854 EPN3Q9H201 632 aa27.49■■□□□ 1.99
C9orf40-201ENST00000376854 CENPHQ9H3R5 247 aa27.49■■□□□ 1.99
C9orf40-201ENST00000376854 AGPAT3Q9NRZ7 376 aa27.49■■□□□ 1.99
C9orf40-201ENST00000376854 UBE4BO95155 1302 aa27.48■■□□□ 1.99
C9orf40-201ENST00000376854 GAS7O60861 476 aa27.48■■□□□ 1.99
C9orf40-201ENST00000376854 TMEM253P0C7T8 217 aa27.48■■□□□ 1.99
C9orf40-201ENST00000376854 TRIM49P0CI25 452 aa27.48■■□□□ 1.99
C9orf40-201ENST00000376854 TRIM49CP0CI26 452 aa27.48■■□□□ 1.99
C9orf40-201ENST00000376854 CTNNA1P35221 906 aaKnown RBP27.48■■□□□ 1.99
C9orf40-201ENST00000376854 UBXN2AP68543 259 aa27.48■■□□□ 1.99
C9orf40-201ENST00000376854 INTS2Q9H0H0 1204 aaKnown RBP27.48■■□□□ 1.99
C9orf40-201ENST00000376854 ATRNL1Q5VV63 1379 aa27.48■■□□□ 1.99
C9orf40-201ENST00000376854 H0YGN5 161 aa27.47■■□□□ 1.99
C9orf40-201ENST00000376854 DAPK3O43293 454 aa27.47■■□□□ 1.99
C9orf40-201ENST00000376854 PPP1R37O75864 691 aa27.47■■□□□ 1.99
C9orf40-201ENST00000376854 ABCB4P21439 1286 aa27.47■■□□□ 1.99
C9orf40-201ENST00000376854 ZNF131P52739 623 aa27.47■■□□□ 1.99
C9orf40-201ENST00000376854 B4GALNT4Q76KP1 1039 aa27.47■■□□□ 1.99
C9orf40-201ENST00000376854 OR2W6PQ8NHA6 318 aa27.47■■□□□ 1.99
C9orf40-201ENST00000376854 C7orf43Q8WVR3 580 aa27.47■■□□□ 1.99
C9orf40-201ENST00000376854 CTNNBL1Q8WYA6 563 aaPredicted RBP27.47■■□□□ 1.99
C9orf40-201ENST00000376854 GPR88Q9GZN0 384 aa27.47■■□□□ 1.99
C9orf40-201ENST00000376854 NFS1Q9Y697 457 aa27.47■■□□□ 1.99
C9orf40-201ENST00000376854 TTI1O43156 1089 aa27.47■■□□□ 1.99
C9orf40-201ENST00000376854 ENTPD3O75355 529 aa27.47■■□□□ 1.99
C9orf40-201ENST00000376854 CPP00450 1065 aa27.47■■□□□ 1.99
C9orf40-201ENST00000376854 POLR2MP0CAP2 368 aa27.47■■□□□ 1.99
C9orf40-201ENST00000376854 MDH1P40925 334 aaKnown RBP27.47■■□□□ 1.99
C9orf40-201ENST00000376854 ECE1P42892 770 aa27.47■■□□□ 1.99
C9orf40-201ENST00000376854 TRAF1Q13077 416 aa27.47■■□□□ 1.99
C9orf40-201ENST00000376854 KCTD19Q17RG1 926 aaPredicted RBP27.47■■□□□ 1.99
C9orf40-201ENST00000376854 KIAA1755Q5JYT7 1200 aa27.47■■□□□ 1.99
C9orf40-201ENST00000376854 ODR4Q5SWX8 454 aa27.47■■□□□ 1.99
C9orf40-201ENST00000376854 MICALL1Q8N3F8 863 aa27.47■■□□□ 1.99
C9orf40-201ENST00000376854 NACC1Q96RE7 527 aa27.47■■□□□ 1.99
C9orf40-201ENST00000376854 SYT11Q9BT88 431 aa27.47■■□□□ 1.99
C9orf40-201ENST00000376854 DMAC2Q9NW81 257 aa27.47■■□□□ 1.99
C9orf40-201ENST00000376854 SMCHD1A6NHR9 2005 aa27.47■■□□□ 1.99
C9orf40-201ENST00000376854 WRAP73Q9P2S5 460 aaPredicted RBP27.46■■□□□ 1.99
C9orf40-201ENST00000376854 PPP1R9AQ9ULJ8 1098 aa27.46■■□□□ 1.99
C9orf40-201ENST00000376854 FGGP02679 453 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms