RNA–Protein interactions for RNA: ENST00000376757.9

SSH3-203, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-203ENST00000376757 SERPINB13Q9UIV8 391 aa17.12■□□□□ 0.33
SSH3-203ENST00000376757 DNAJC12Q9UKB3 198 aa17.12■□□□□ 0.33
SSH3-203ENST00000376757 RREB1Q92766 1687 aa17.12■□□□□ 0.33
SSH3-203ENST00000376757 NAV1Q8NEY1 1877 aa17.12■□□□□ 0.33
SSH3-203ENST00000376757 EIF4E1BA6NMX2 242 aaKnown RBP17.11■□□□□ 0.33
SSH3-203ENST00000376757 CHUKO15111 745 aa17.11■□□□□ 0.33
SSH3-203ENST00000376757 TBCAO75347 108 aaKnown RBP17.11■□□□□ 0.33
SSH3-203ENST00000376757 ARHGAP4P98171 946 aa17.11■□□□□ 0.33
SSH3-203ENST00000376757 LRIG3Q6UXM1 1119 aa17.11■□□□□ 0.33
SSH3-203ENST00000376757 TBC1D1Q86TI0 1168 aaPredicted RBP17.11■□□□□ 0.33
SSH3-203ENST00000376757 TATDN2Q93075 761 aa17.11■□□□□ 0.33
SSH3-203ENST00000376757 USP40Q9NVE5 1235 aa17.11■□□□□ 0.33
SSH3-203ENST00000376757 GGA1Q9UJY5 639 aa17.11■□□□□ 0.33
SSH3-203ENST00000376757 CREB1P16220 341 aa17.11■□□□□ 0.33
SSH3-203ENST00000376757 DRD4P21917 467 aa17.11■□□□□ 0.33
SSH3-203ENST00000376757 SNCBQ16143 134 aa17.11■□□□□ 0.33
SSH3-203ENST00000376757 IFI16Q16666 785 aaKnown RBP17.11■□□□□ 0.33
SSH3-203ENST00000376757 PHLDB2Q86SQ0 1253 aa17.11■□□□□ 0.33
SSH3-203ENST00000376757 LRRC34Q8IZ02 419 aa17.11■□□□□ 0.33
SSH3-203ENST00000376757 CTNNBL1Q8WYA6 563 aaPredicted RBP17.11■□□□□ 0.33
SSH3-203ENST00000376757 PCIF1Q9H4Z3 704 aa17.11■□□□□ 0.33
SSH3-203ENST00000376757 DAAM1Q9Y4D1 1078 aa17.11■□□□□ 0.33
SSH3-203ENST00000376757 GDF11O95390 407 aa17.1■□□□□ 0.33
SSH3-203ENST00000376757 CCDC172P0C7W6 258 aa17.1■□□□□ 0.33
SSH3-203ENST00000376757 SPATS2Q86XZ4 545 aaKnown RBP17.1■□□□□ 0.33
SSH3-203ENST00000376757 XPO6Q96QU8 1125 aaKnown RBP17.1■□□□□ 0.33
SSH3-203ENST00000376757 STXBP5LQ9Y2K9 1186 aa17.1■□□□□ 0.33
SSH3-203ENST00000376757 ANKRD63C9JTQ0 380 aa17.1■□□□□ 0.33
SSH3-203ENST00000376757 UBAP1LF5GYI3 381 aa17.1■□□□□ 0.33
SSH3-203ENST00000376757 ZNF76P36508 570 aa17.1■□□□□ 0.33
SSH3-203ENST00000376757 MARSP56192 900 aaKnown RBP17.1■□□□□ 0.33
SSH3-203ENST00000376757 BIRC3Q13489 604 aa17.1■□□□□ 0.33
SSH3-203ENST00000376757 ACCSLQ4AC99 568 aa17.1■□□□□ 0.33
SSH3-203ENST00000376757 FAM186BQ8IYM0 893 aa17.1■□□□□ 0.33
SSH3-203ENST00000376757 BANK1Q8NDB2 785 aa17.1■□□□□ 0.33
SSH3-203ENST00000376757 ODF2LQ9ULJ1 636 aa17.1■□□□□ 0.33
SSH3-203ENST00000376757 L3MBTL1Q9Y468 752 aa17.1■□□□□ 0.33
SSH3-203ENST00000376757 LAMB2P55268 1798 aa17.1■□□□□ 0.33
SSH3-203ENST00000376757 TGFB1I1O43294 461 aa17.1■□□□□ 0.33
SSH3-203ENST00000376757 CALCAP01258 141 aa17.1■□□□□ 0.33
SSH3-203ENST00000376757 SHMT1P34896 483 aa17.1■□□□□ 0.33
SSH3-203ENST00000376757 GSCP56915 257 aaPredicted RBP17.1■□□□□ 0.33
SSH3-203ENST00000376757 EDRF1Q3B7T1 1238 aa17.1■□□□□ 0.33
SSH3-203ENST00000376757 FRMD5Q7Z6J6 570 aa17.1■□□□□ 0.33
SSH3-203ENST00000376757 YTHDF3Q7Z739 585 aaKnown RBP17.1■□□□□ 0.33
SSH3-203ENST00000376757 HES6Q96HZ4 224 aa17.1■□□□□ 0.33
SSH3-203ENST00000376757 EPB41L4BQ9H329 900 aa17.1■□□□□ 0.33
SSH3-203ENST00000376757 RPS6KA4O75676 772 aa17.09■□□□□ 0.33
SSH3-203ENST00000376757 MESDQ14696 234 aa17.09■□□□□ 0.33
SSH3-203ENST00000376757 MSL1Q68DK7 614 aa17.09■□□□□ 0.33
SSH3-203ENST00000376757 ZDHHC14Q8IZN3 488 aa17.09■□□□□ 0.33
SSH3-203ENST00000376757 HOOK2Q96ED9 719 aa17.09■□□□□ 0.33
SSH3-203ENST00000376757 CHMP6Q96FZ7 201 aa17.09■□□□□ 0.33
SSH3-203ENST00000376757 KCNMB3Q9NPA1 279 aa17.09■□□□□ 0.33
SSH3-203ENST00000376757 CTTNBP2NLQ9P2B4 639 aa17.09■□□□□ 0.33
SSH3-203ENST00000376757 SUCLA2Q9P2R7 463 aaPredicted RBP17.09■□□□□ 0.33
SSH3-203ENST00000376757 MEIS2O14770 477 aa17.09■□□□□ 0.33
SSH3-203ENST00000376757 CALUO43852 315 aaPredicted RBP17.09■□□□□ 0.33
SSH3-203ENST00000376757 PMS2P54278 862 aa17.09■□□□□ 0.33
SSH3-203ENST00000376757 TRIP13Q15645 432 aaPredicted RBP17.09■□□□□ 0.33
SSH3-203ENST00000376757 DENND2CQ68D51 928 aa17.09■□□□□ 0.33
SSH3-203ENST00000376757 NSMFQ6X4W1 530 aa17.09■□□□□ 0.33
SSH3-203ENST00000376757 JAMLQ86YT9 394 aa17.09■□□□□ 0.33
SSH3-203ENST00000376757 KAT5Q92993 513 aa17.09■□□□□ 0.33
SSH3-203ENST00000376757 THOC1Q96FV9 657 aaKnown RBP17.09■□□□□ 0.33
SSH3-203ENST00000376757 CCDC188H7C350 402 aa17.08■□□□□ 0.33
SSH3-203ENST00000376757 DDX3YO15523 660 aaKnown RBP17.08■□□□□ 0.33
SSH3-203ENST00000376757 SKAP2O75563 359 aaPredicted RBP17.08■□□□□ 0.33
SSH3-203ENST00000376757 SNHG28P0DPA3 235 aa17.08■□□□□ 0.33
SSH3-203ENST00000376757 EEF2P13639 858 aaKnown RBP17.08■□□□□ 0.33
SSH3-203ENST00000376757 VPS41P49754 854 aa17.08■□□□□ 0.33
SSH3-203ENST00000376757 SPIRE1Q08AE8 756 aa17.08■□□□□ 0.33
SSH3-203ENST00000376757 ZKSCAN8Q15776 578 aaPredicted RBP17.08■□□□□ 0.33
SSH3-203ENST00000376757 SEPT14Q6ZU15 432 aa17.08■□□□□ 0.33
SSH3-203ENST00000376757 KIF2BQ8N4N8 673 aa17.08■□□□□ 0.33
SSH3-203ENST00000376757 CERS5Q8N5B7 392 aa17.08■□□□□ 0.33
SSH3-203ENST00000376757 FAM84AQ96KN4 292 aa17.08■□□□□ 0.33
SSH3-203ENST00000376757 KCNQ5Q9NR82 932 aa17.08■□□□□ 0.33
SSH3-203ENST00000376757 ABCF3Q9NUQ8 709 aa17.08■□□□□ 0.33
SSH3-203ENST00000376757 DDX39AO00148 427 aaKnown RBP17.08■□□□□ 0.32
SSH3-203ENST00000376757 FOXN3O00409 490 aaPredicted RBP17.08■□□□□ 0.32
SSH3-203ENST00000376757 RGS16O15492 202 aaPredicted RBP17.08■□□□□ 0.32
SSH3-203ENST00000376757 ACSL3O95573 720 aa17.08■□□□□ 0.32
SSH3-203ENST00000376757 TNFAIP3P21580 790 aa17.08■□□□□ 0.32
SSH3-203ENST00000376757 NF2P35240 595 aa17.08■□□□□ 0.32
SSH3-203ENST00000376757 JAM2P57087 298 aa17.08■□□□□ 0.32
SSH3-203ENST00000376757 SNX1Q13596 522 aa17.08■□□□□ 0.32
SSH3-203ENST00000376757 MTMR3Q13615 1198 aa17.08■□□□□ 0.32
SSH3-203ENST00000376757 SEPT2Q15019 361 aa17.08■□□□□ 0.32
SSH3-203ENST00000376757 EMC10Q5UCC4 262 aa17.08■□□□□ 0.32
SSH3-203ENST00000376757 FAM196AQ6ZSG2 479 aa17.08■□□□□ 0.32
SSH3-203ENST00000376757 ZSWIM2Q8NEG5 633 aa17.08■□□□□ 0.32
SSH3-203ENST00000376757 CALR3Q96L12 384 aaKnown RBP17.08■□□□□ 0.32
SSH3-203ENST00000376757 ERP44Q9BS26 406 aa17.08■□□□□ 0.32
SSH3-203ENST00000376757 ATF5Q9Y2D1 282 aaPredicted RBP17.08■□□□□ 0.32
SSH3-203ENST00000376757 FAM13AO94988 1023 aa17.07■□□□□ 0.32
SSH3-203ENST00000376757 RPL21P46778 160 aaKnown RBP17.07■□□□□ 0.32
SSH3-203ENST00000376757 DLG4P78352 724 aa17.07■□□□□ 0.32
SSH3-203ENST00000376757 POU5F1Q01860 360 aaKnown RBP17.07■□□□□ 0.32
SSH3-203ENST00000376757 ORC2Q13416 577 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms