RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 FXR2P51116 673 aaKnown RBP eCLIP12.66□□□□□ -0.382e-6■■■□□ 15.4
DDR1-227ENST00000376570 DLG4P78352 724 aa12.66□□□□□ -0.38
DDR1-227ENST00000376570 DMP1Q13316 513 aaPredicted RBP12.66□□□□□ -0.38
DDR1-227ENST00000376570 PDIA5Q14554 519 aa12.66□□□□□ -0.38
DDR1-227ENST00000376570 SPATA20Q8TB22 786 aa12.66□□□□□ -0.38
DDR1-227ENST00000376570 SLC20A1Q8WUM9 679 aa12.66□□□□□ -0.38
DDR1-227ENST00000376570 CNKSR2Q8WXI2 1034 aa12.66□□□□□ -0.38
DDR1-227ENST00000376570 GLT8D2Q9H1C3 349 aa12.66□□□□□ -0.38
DDR1-227ENST00000376570 VCPKMTQ9H867 229 aa12.66□□□□□ -0.38
DDR1-227ENST00000376570 ZNF142P52746 1687 aaPredicted RBP12.66□□□□□ -0.38
DDR1-227ENST00000376570 ALS2Q96Q42 1657 aa12.66□□□□□ -0.38
DDR1-227ENST00000376570 SYNJ2BP-COX16A0A087WUM0 186 aa12.66□□□□□ -0.38
DDR1-227ENST00000376570 EIF3CLB5ME19 914 aaKnown RBP12.66□□□□□ -0.38
DDR1-227ENST00000376570 FGRP09769 529 aa12.66□□□□□ -0.38
DDR1-227ENST00000376570 NUMBP49757 651 aa12.66□□□□□ -0.38
DDR1-227ENST00000376570 CCDC38Q502W7 563 aa12.66□□□□□ -0.38
DDR1-227ENST00000376570 HAUS6Q7Z4H7 955 aa12.66□□□□□ -0.38
DDR1-227ENST00000376570 CBWD2Q8IUF1 395 aa12.66□□□□□ -0.38
DDR1-227ENST00000376570 EIF3CQ99613 913 aaKnown RBP12.66□□□□□ -0.38
DDR1-227ENST00000376570 MYOZ2Q9NPC6 264 aa12.66□□□□□ -0.38
DDR1-227ENST00000376570 GGA3Q9NZ52 723 aa12.66□□□□□ -0.38
DDR1-227ENST00000376570 COX16Q9P0S2 106 aa12.66□□□□□ -0.38
DDR1-227ENST00000376570 ROBO1Q9Y6N7 1651 aa12.65□□□□□ -0.38
DDR1-227ENST00000376570 TCP1P17987 556 aaKnown RBP12.65□□□□□ -0.38
DDR1-227ENST00000376570 PPP1R2P41236 205 aa12.65□□□□□ -0.38
DDR1-227ENST00000376570 ARSHQ5FYA8 562 aa12.65□□□□□ -0.38
DDR1-227ENST00000376570 IFT20Q8IY31 132 aa12.65□□□□□ -0.38
DDR1-227ENST00000376570 MAGOHBQ96A72 148 aaKnown RBP12.65□□□□□ -0.38
DDR1-227ENST00000376570 HACL1Q9UJ83 578 aa12.65□□□□□ -0.38
DDR1-227ENST00000376570 ZNRF3Q9ULT6 936 aa12.65□□□□□ -0.38
DDR1-227ENST00000376570 GAKO14976 1311 aa12.65□□□□□ -0.38
DDR1-227ENST00000376570 GOLGA6L10A0A0M3HER8 536 aa12.65□□□□□ -0.38
DDR1-227ENST00000376570 ITGA4P13612 1032 aa12.65□□□□□ -0.38
DDR1-227ENST00000376570 HOXA10P31260 410 aaPredicted RBP12.65□□□□□ -0.38
DDR1-227ENST00000376570 GALCP54803 685 aa12.65□□□□□ -0.38
DDR1-227ENST00000376570 STRN3Q13033 797 aa12.65□□□□□ -0.38
DDR1-227ENST00000376570 LLGL2Q6P1M3 1020 aa12.65□□□□□ -0.38
DDR1-227ENST00000376570 B4GALNT4Q76KP1 1039 aa12.65□□□□□ -0.38
DDR1-227ENST00000376570 CCDC170Q8IYT3 715 aa12.65□□□□□ -0.38
DDR1-227ENST00000376570 RPUSD2Q8IZ73 545 aaKnown RBP12.65□□□□□ -0.38
DDR1-227ENST00000376570 DNAJC19Q96DA6 116 aa12.65□□□□□ -0.38
DDR1-227ENST00000376570 MAGEF1Q9HAY2 307 aa12.65□□□□□ -0.38
DDR1-227ENST00000376570 MAGED2Q9UNF1 606 aaPredicted RBP12.65□□□□□ -0.38
DDR1-227ENST00000376570 DAPK3O43293 454 aa12.65□□□□□ -0.38
DDR1-227ENST00000376570 ATP9AO75110 1047 aa12.65□□□□□ -0.38
DDR1-227ENST00000376570 GJB6O95452 261 aa12.65□□□□□ -0.38
DDR1-227ENST00000376570 FTLP02792 175 aaPredicted RBP12.65□□□□□ -0.38
DDR1-227ENST00000376570 PGK2P07205 417 aa12.65□□□□□ -0.38
DDR1-227ENST00000376570 USP14P54578 494 aa12.65□□□□□ -0.38
DDR1-227ENST00000376570 KCNMA1Q12791 1236 aa12.65□□□□□ -0.38
DDR1-227ENST00000376570 ZNF571Q7Z3V5 609 aaPredicted RBP12.65□□□□□ -0.38
DDR1-227ENST00000376570 LRRC71Q8N4P6 559 aa12.65□□□□□ -0.38
DDR1-227ENST00000376570 PRPF38AQ8NAV1 312 aaKnown RBP12.65□□□□□ -0.38
DDR1-227ENST00000376570 DAGLBQ8NCG7 672 aa12.65□□□□□ -0.38
DDR1-227ENST00000376570 NAP1L4Q99733 375 aaKnown RBP12.65□□□□□ -0.38
DDR1-227ENST00000376570 CEP72Q9P209 647 aa12.65□□□□□ -0.38
DDR1-227ENST00000376570 SNX12Q9UMY4 172 aa12.65□□□□□ -0.38
DDR1-227ENST00000376570 E7EVH7 732 aa12.64□□□□□ -0.39
DDR1-227ENST00000376570 FOXN3O00409 490 aaPredicted RBP12.64□□□□□ -0.39
DDR1-227ENST00000376570 USP11P51784 963 aa12.64□□□□□ -0.39
DDR1-227ENST00000376570 WDR44Q5JSH3 913 aa12.64□□□□□ -0.39
DDR1-227ENST00000376570 SPOPLQ6IQ16 392 aa12.64□□□□□ -0.39
DDR1-227ENST00000376570 OTUD6BQ8N6M0 293 aa12.64□□□□□ -0.39
DDR1-227ENST00000376570 COL4A1P02462 1669 aa12.64□□□□□ -0.39
DDR1-227ENST00000376570 A0A1W2PQC6 194 aa12.64□□□□□ -0.39
DDR1-227ENST00000376570 PI4K2BG5E9Z4 385 aa12.64□□□□□ -0.39
DDR1-227ENST00000376570 RPA1P27694 616 aa12.64□□□□□ -0.39
DDR1-227ENST00000376570 GABPAQ06546 454 aa12.64□□□□□ -0.39
DDR1-227ENST00000376570 TMEM62Q0P6H9 643 aa12.64□□□□□ -0.39
DDR1-227ENST00000376570 AP3B2Q13367 1082 aa12.64□□□□□ -0.39
DDR1-227ENST00000376570 IFI16Q16666 785 aaKnown RBP12.64□□□□□ -0.39
DDR1-227ENST00000376570 CPA5Q8WXQ8 436 aa12.64□□□□□ -0.39
DDR1-227ENST00000376570 EXOC4Q96A65 974 aa12.64□□□□□ -0.39
DDR1-227ENST00000376570 WNK4Q96J92 1243 aa12.64□□□□□ -0.39
DDR1-227ENST00000376570 PLCD4Q9BRC7 762 aa12.64□□□□□ -0.39
DDR1-227ENST00000376570 INTS2Q9H0H0 1204 aaKnown RBP12.64□□□□□ -0.39
DDR1-227ENST00000376570 TAS2R14Q9NYV8 317 aa12.64□□□□□ -0.39
DDR1-227ENST00000376570 TTC7AQ9ULT0 858 aaPredicted RBP12.64□□□□□ -0.39
DDR1-227ENST00000376570 N4BP2Q86UW6 1770 aaPredicted RBP12.64□□□□□ -0.39
DDR1-227ENST00000376570 GNA14O95837 355 aa12.64□□□□□ -0.39
DDR1-227ENST00000376570 BCRP11274 1271 aa12.64□□□□□ -0.39
DDR1-227ENST00000376570 MCM3P25205 808 aa12.64□□□□□ -0.39
DDR1-227ENST00000376570 YWHABP31946 246 aaKnown RBP12.64□□□□□ -0.39
DDR1-227ENST00000376570 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.64□□□□□ -0.39
DDR1-227ENST00000376570 TRIM50Q86XT4 487 aa12.64□□□□□ -0.39
DDR1-227ENST00000376570 C1orf54Q8WWF1 131 aa12.64□□□□□ -0.39
DDR1-227ENST00000376570 PLAGL2Q9UPG8 496 aa12.64□□□□□ -0.39
DDR1-227ENST00000376570 TTI1O43156 1089 aa12.63□□□□□ -0.39
DDR1-227ENST00000376570 SLITRK3O94933 977 aa12.63□□□□□ -0.39
DDR1-227ENST00000376570 CYP4F22Q6NT55 531 aa12.63□□□□□ -0.39
DDR1-227ENST00000376570 C11orf70Q9BRQ4 267 aa12.63□□□□□ -0.39
DDR1-227ENST00000376570 GGT7Q9UJ14 662 aa12.63□□□□□ -0.39
DDR1-227ENST00000376570 MRPL42Q9Y6G3 142 aaKnown RBP12.63□□□□□ -0.39
DDR1-227ENST00000376570 EYA4O95677 639 aa12.63□□□□□ -0.39
DDR1-227ENST00000376570 MYL1P05976 194 aa12.63□□□□□ -0.39
DDR1-227ENST00000376570 PON1P27169 355 aa12.63□□□□□ -0.39
DDR1-227ENST00000376570 CBWD6Q4V339 395 aa12.63□□□□□ -0.39
DDR1-227ENST00000376570 CBWD3Q5JTY5 395 aa12.63□□□□□ -0.39
DDR1-227ENST00000376570 CBWD5Q5RIA9 395 aa12.63□□□□□ -0.39
DDR1-227ENST00000376570 DCUN1D2Q6PH85 259 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms