RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 KSR1Q8IVT5 923 aa15.96■□□□□ 0.15
CLCN6-203ENST00000376490 ZNF710Q8N1W2 664 aa15.96■□□□□ 0.15
CLCN6-203ENST00000376490 FIBCD1Q8N539 461 aa15.96■□□□□ 0.15
CLCN6-203ENST00000376490 FBXO22Q8NEZ5 403 aa15.96■□□□□ 0.15
CLCN6-203ENST00000376490 NLRP7Q8WX94 980 aa15.96■□□□□ 0.15
CLCN6-203ENST00000376490 SCLT1Q96NL6 688 aa15.96■□□□□ 0.15
CLCN6-203ENST00000376490 RC3H2Q9HBD1 1191 aaKnown RBP15.96■□□□□ 0.15
CLCN6-203ENST00000376490 GTF3C3Q9Y5Q9 886 aa15.96■□□□□ 0.15
CLCN6-203ENST00000376490 EYSQ5T1H1 3165 aa15.96■□□□□ 0.15
CLCN6-203ENST00000376490 A0A087WZ62 844 aa15.95■□□□□ 0.14
CLCN6-203ENST00000376490 POTEMA6NI47 508 aa15.95■□□□□ 0.14
CLCN6-203ENST00000376490 GTPBP6O43824 516 aaPredicted RBP15.95■□□□□ 0.14
CLCN6-203ENST00000376490 STAG3L1P0CL83 205 aa15.95■□□□□ 0.14
CLCN6-203ENST00000376490 DARSP14868 501 aaKnown RBP15.95■□□□□ 0.14
CLCN6-203ENST00000376490 TECP42680 631 aa15.95■□□□□ 0.14
CLCN6-203ENST00000376490 SARSP49591 514 aaKnown RBP15.95■□□□□ 0.14
CLCN6-203ENST00000376490 TOB1P50616 345 aaPredicted RBP15.95■□□□□ 0.14
CLCN6-203ENST00000376490 BTG3Q14201 252 aaPredicted RBP15.95■□□□□ 0.14
CLCN6-203ENST00000376490 DSC3Q14574 896 aa15.95■□□□□ 0.14
CLCN6-203ENST00000376490 SLC24A5Q71RS6 500 aa15.95■□□□□ 0.14
CLCN6-203ENST00000376490 RHPN2Q8IUC4 686 aa15.95■□□□□ 0.14
CLCN6-203ENST00000376490 NPAS4Q8IUM7 802 aa15.95■□□□□ 0.14
CLCN6-203ENST00000376490 TMEM192Q8IY95 271 aa15.95■□□□□ 0.14
CLCN6-203ENST00000376490 C4orf32Q8N8J7 132 aa15.95■□□□□ 0.14
CLCN6-203ENST00000376490 FDXACB1Q9BRP7 624 aaPredicted RBP15.95■□□□□ 0.14
CLCN6-203ENST00000376490 DHX33Q9H6R0 707 aaKnown RBP15.95■□□□□ 0.14
CLCN6-203ENST00000376490 BMP2KQ9NSY1 1161 aaPredicted RBP15.95■□□□□ 0.14
CLCN6-203ENST00000376490 LRFN2Q9ULH4 789 aa15.95■□□□□ 0.14
CLCN6-203ENST00000376490 NOL7Q9UMY1 257 aaKnown RBP15.95■□□□□ 0.14
CLCN6-203ENST00000376490 MYO7AQ13402 2215 aa15.95■□□□□ 0.14
CLCN6-203ENST00000376490 TCF20Q9UGU0 1960 aaKnown RBP15.95■□□□□ 0.14
CLCN6-203ENST00000376490 REV3LO60673 3130 aa15.94■□□□□ 0.14
CLCN6-203ENST00000376490 C9IYK1 514 aa15.94■□□□□ 0.14
CLCN6-203ENST00000376490 GATMP50440 423 aa15.94■□□□□ 0.14
CLCN6-203ENST00000376490 POLGP54098 1239 aaPredicted RBP15.94■□□□□ 0.14
CLCN6-203ENST00000376490 FAM189BP81408 668 aa15.94■□□□□ 0.14
CLCN6-203ENST00000376490 CDC42EP1Q00587 391 aa15.94■□□□□ 0.14
CLCN6-203ENST00000376490 MCTP1Q6DN14 999 aa15.94■□□□□ 0.14
CLCN6-203ENST00000376490 FAM43BQ6ZT52 329 aaPredicted RBP15.94■□□□□ 0.14
CLCN6-203ENST00000376490 SLC7A3Q8WY07 619 aa15.94■□□□□ 0.14
CLCN6-203ENST00000376490 TMEM143Q96AN5 459 aa15.94■□□□□ 0.14
CLCN6-203ENST00000376490 JPH2Q9BR39 696 aaPredicted RBP15.94■□□□□ 0.14
CLCN6-203ENST00000376490 GCOM2Q9BZD3 368 aaPredicted RBP15.94■□□□□ 0.14
CLCN6-203ENST00000376490 C1orf112Q9NSG2 853 aa15.94■□□□□ 0.14
CLCN6-203ENST00000376490 KIF3AQ9Y496 699 aa15.94■□□□□ 0.14
CLCN6-203ENST00000376490 PCDHB7Q9Y5E2 793 aa15.94■□□□□ 0.14
CLCN6-203ENST00000376490 PCDHB6Q9Y5E3 794 aa15.94■□□□□ 0.14
CLCN6-203ENST00000376490 ADGRA3Q8IWK6 1321 aa15.94■□□□□ 0.14
CLCN6-203ENST00000376490 PRUNE2Q8WUY3 3088 aa15.93■□□□□ 0.14
CLCN6-203ENST00000376490 PLXNA4Q9HCM2 1894 aa15.93■□□□□ 0.14
CLCN6-203ENST00000376490 LYPLA2O95372 231 aa15.93■□□□□ 0.14
CLCN6-203ENST00000376490 OR52Z1P0C646 297 aa15.93■□□□□ 0.14
CLCN6-203ENST00000376490 LINC00271P0C7V0 271 aa15.93■□□□□ 0.14
CLCN6-203ENST00000376490 SPATA31C1P0DKV0 1188 aa15.93■□□□□ 0.14
CLCN6-203ENST00000376490 RFC5P40937 340 aa15.93■□□□□ 0.14
CLCN6-203ENST00000376490 TRAPPC10P48553 1259 aa15.93■□□□□ 0.14
CLCN6-203ENST00000376490 ORC2Q13416 577 aaPredicted RBP15.93■□□□□ 0.14
CLCN6-203ENST00000376490 GPM6BQ13491 265 aa15.93■□□□□ 0.14
CLCN6-203ENST00000376490 PAN2Q504Q3 1202 aaKnown RBP15.93■□□□□ 0.14
CLCN6-203ENST00000376490 FAM102BQ5T8I3 360 aa15.93■□□□□ 0.14
CLCN6-203ENST00000376490 CATSPER3Q86XQ3 398 aa15.93■□□□□ 0.14
CLCN6-203ENST00000376490 EXOC8Q8IYI6 725 aa15.93■□□□□ 0.14
CLCN6-203ENST00000376490 NEK9Q8TD19 979 aa15.93■□□□□ 0.14
CLCN6-203ENST00000376490 PIGOQ8TEQ8 1089 aa15.93■□□□□ 0.14
CLCN6-203ENST00000376490 PRPF31Q8WWY3 499 aaKnown RBP15.93■□□□□ 0.14
CLCN6-203ENST00000376490 SAMD11Q96NU1 681 aa15.93■□□□□ 0.14
CLCN6-203ENST00000376490 SMC3Q9UQE7 1217 aa15.93■□□□□ 0.14
CLCN6-203ENST00000376490 PPME1Q9Y570 386 aa15.93■□□□□ 0.14
CLCN6-203ENST00000376490 H3BNC9 293 aa15.92■□□□□ 0.14
CLCN6-203ENST00000376490 MED24O75448 989 aa15.92■□□□□ 0.14
CLCN6-203ENST00000376490 ZSCAN20P17040 1043 aaPredicted RBP15.92■□□□□ 0.14
CLCN6-203ENST00000376490 BMPR1AP36894 532 aa15.92■□□□□ 0.14
CLCN6-203ENST00000376490 NLRP4Q96MN2 994 aa15.92■□□□□ 0.14
CLCN6-203ENST00000376490 ANKEF1Q9NU02 776 aa15.92■□□□□ 0.14
CLCN6-203ENST00000376490 LMCD1Q9NZU5 365 aa15.92■□□□□ 0.14
CLCN6-203ENST00000376490 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.92■□□□□ 0.14
CLCN6-203ENST00000376490 COL4A3BPQ9Y5P4 624 aa15.92■□□□□ 0.14
CLCN6-203ENST00000376490 MRPL42Q9Y6G3 142 aaKnown RBP15.92■□□□□ 0.14
CLCN6-203ENST00000376490 H3BQV1 296 aa15.91■□□□□ 0.14
CLCN6-203ENST00000376490 SRGAP2CP0DJJ0 459 aa15.91■□□□□ 0.14
CLCN6-203ENST00000376490 XRCC6P12956 609 aaKnown RBP eCLIP15.91■□□□□ 0.14
CLCN6-203ENST00000376490 CTNNB1P35222 781 aa15.91■□□□□ 0.14
CLCN6-203ENST00000376490 LAMTOR4Q0VGL1 99 aa15.91■□□□□ 0.14
CLCN6-203ENST00000376490 PTGDRQ13258 359 aa15.91■□□□□ 0.14
CLCN6-203ENST00000376490 EMC2Q15006 297 aa15.91■□□□□ 0.14
CLCN6-203ENST00000376490 ZNF410Q86VK4 478 aa15.91■□□□□ 0.14
CLCN6-203ENST00000376490 CMTR2Q8IYT2 770 aaKnown RBP15.91■□□□□ 0.14
CLCN6-203ENST00000376490 TCP11Q8WWU5 503 aa15.91■□□□□ 0.14
CLCN6-203ENST00000376490 CLP1Q92989 425 aaKnown RBP15.91■□□□□ 0.14
CLCN6-203ENST00000376490 IFT122Q9HBG6 1241 aa15.91■□□□□ 0.14
CLCN6-203ENST00000376490 TUFT1Q9NNX1 390 aa15.91■□□□□ 0.14
CLCN6-203ENST00000376490 XPNPEP1Q9NQW7 623 aa15.91■□□□□ 0.14
CLCN6-203ENST00000376490 FGFR1P11362 822 aa15.9■□□□□ 0.14
CLCN6-203ENST00000376490 RARRES1P49788 294 aa15.9■□□□□ 0.14
CLCN6-203ENST00000376490 SKIV2LQ15477 1246 aaKnown RBP15.9■□□□□ 0.14
CLCN6-203ENST00000376490 LARP1BQ659C4 914 aaKnown RBP15.9■□□□□ 0.14
CLCN6-203ENST00000376490 FERMT3Q86UX7 667 aa15.9■□□□□ 0.14
CLCN6-203ENST00000376490 PSPC1Q8WXF1 523 aaKnown RBP15.9■□□□□ 0.14
CLCN6-203ENST00000376490 MTRQ99707 1265 aa15.9■□□□□ 0.14
CLCN6-203ENST00000376490 POLR3CQ9BUI4 534 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms