RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 MAGOHBQ96A72 148 aaKnown RBP16.52■□□□□ 0.24
MSH5-203ENST00000375750 GFPT2O94808 682 aa16.52■□□□□ 0.23
MSH5-203ENST00000375750 ECE1P42892 770 aa16.52■□□□□ 0.23
MSH5-203ENST00000375750 SWT1Q5T5J6 900 aaKnown RBP16.52■□□□□ 0.23
MSH5-203ENST00000375750 EMC10Q5UCC4 262 aa16.52■□□□□ 0.23
MSH5-203ENST00000375750 PPP4R3AQ6IN85 833 aa16.52■□□□□ 0.23
MSH5-203ENST00000375750 DAAM2Q86T65 1068 aa16.52■□□□□ 0.23
MSH5-203ENST00000375750 SPICE1Q8N0Z3 855 aa16.52■□□□□ 0.23
MSH5-203ENST00000375750 RAPGEF5Q92565 580 aa16.52■□□□□ 0.23
MSH5-203ENST00000375750 P2RX7Q99572 595 aaKnown RBP16.52■□□□□ 0.23
MSH5-203ENST00000375750 NCAPGQ9BPX3 1015 aa16.52■□□□□ 0.23
MSH5-203ENST00000375750 OSBPL7Q9BZF2 842 aa16.52■□□□□ 0.23
MSH5-203ENST00000375750 PSTPIP2Q9H939 334 aa16.52■□□□□ 0.23
MSH5-203ENST00000375750 HERC5Q9UII4 1024 aaKnown RBP16.52■□□□□ 0.23
MSH5-203ENST00000375750 CD2APQ9Y5K6 639 aa16.52■□□□□ 0.23
MSH5-203ENST00000375750 GMNCA6NCL1 334 aa16.51■□□□□ 0.23
MSH5-203ENST00000375750 PGRMC1O00264 195 aaKnown RBP16.51■□□□□ 0.23
MSH5-203ENST00000375750 CLK2P49760 499 aaKnown RBP16.51■□□□□ 0.23
MSH5-203ENST00000375750 DHX9Q08211 1270 aaKnown RBP16.51■□□□□ 0.23
MSH5-203ENST00000375750 PRPF4BQ13523 1007 aaKnown RBP16.51■□□□□ 0.23
MSH5-203ENST00000375750 EXOC3L4Q17RC7 722 aa16.51■□□□□ 0.23
MSH5-203ENST00000375750 C6orf89Q6UWU4 347 aa16.51■□□□□ 0.23
MSH5-203ENST00000375750 KSR1Q8IVT5 923 aa16.51■□□□□ 0.23
MSH5-203ENST00000375750 LRRC27Q9C0I9 530 aa16.51■□□□□ 0.23
MSH5-203ENST00000375750 DDX3XO00571 662 aaKnown RBP eCLIP16.51■□□□□ 0.237e-9■■□□□ 12.6
MSH5-203ENST00000375750 ZBTB5O15062 677 aa16.51■□□□□ 0.23
MSH5-203ENST00000375750 NDUFB10O96000 172 aa16.51■□□□□ 0.23
MSH5-203ENST00000375750 ABCB4P21439 1286 aa16.51■□□□□ 0.23
MSH5-203ENST00000375750 CYP4A11Q02928 519 aa16.51■□□□□ 0.23
MSH5-203ENST00000375750 ZNF211Q13398 564 aaPredicted RBP16.51■□□□□ 0.23
MSH5-203ENST00000375750 BYSLQ13895 437 aaKnown RBP16.51■□□□□ 0.23
MSH5-203ENST00000375750 AADACL2Q6P093 401 aa16.51■□□□□ 0.23
MSH5-203ENST00000375750 MTMR14Q8NCE2 650 aa16.51■□□□□ 0.23
MSH5-203ENST00000375750 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.51■□□□□ 0.231e-7■■□□□ 13.4
MSH5-203ENST00000375750 VCPKMTQ9H867 229 aa16.51■□□□□ 0.23
MSH5-203ENST00000375750 ARMCX3Q9UH62 379 aaPredicted RBP16.51■□□□□ 0.23
MSH5-203ENST00000375750 SMIM23A6NLE4 172 aa16.5■□□□□ 0.23
MSH5-203ENST00000375750 SLC12A3P55017 1021 aa16.5■□□□□ 0.23
MSH5-203ENST00000375750 ORC2Q13416 577 aaPredicted RBP16.5■□□□□ 0.23
MSH5-203ENST00000375750 ACTRT1Q8TDG2 376 aa16.5■□□□□ 0.23
MSH5-203ENST00000375750 UPF1Q92900 1129 aaKnown RBP eCLIP16.5■□□□□ 0.23
MSH5-203ENST00000375750 CUL5Q93034 780 aa16.5■□□□□ 0.23
MSH5-203ENST00000375750 ZBED3Q96IU2 234 aaPredicted RBP16.5■□□□□ 0.23
MSH5-203ENST00000375750 YY1AP1Q9H869 796 aa16.5■□□□□ 0.23
MSH5-203ENST00000375750 SLC40A1Q9NP59 571 aa16.5■□□□□ 0.23
MSH5-203ENST00000375750 SIX2Q9NPC8 291 aa16.5■□□□□ 0.23
MSH5-203ENST00000375750 ATP8A1Q9Y2Q0 1164 aa16.5■□□□□ 0.23
MSH5-203ENST00000375750 PCDHB13Q9Y5F0 798 aa16.5■□□□□ 0.23
MSH5-203ENST00000375750 IGSF9BQ9UPX0 1349 aa16.5■□□□□ 0.23
MSH5-203ENST00000375750 A6NNZ2 444 aa16.5■□□□□ 0.23
MSH5-203ENST00000375750 AFPP02771 609 aaKnown RBP16.5■□□□□ 0.23
MSH5-203ENST00000375750 SHBGP04278 402 aa16.5■□□□□ 0.23
MSH5-203ENST00000375750 MARSP56192 900 aaKnown RBP16.5■□□□□ 0.23
MSH5-203ENST00000375750 KRT71Q3SY84 523 aa16.5■□□□□ 0.23
MSH5-203ENST00000375750 TUBB8Q3ZCM7 444 aa16.5■□□□□ 0.23
MSH5-203ENST00000375750 MICALCLQ6ZW33 695 aa16.5■□□□□ 0.23
MSH5-203ENST00000375750 CATSPER3Q86XQ3 398 aa16.5■□□□□ 0.23
MSH5-203ENST00000375750 UHMK1Q8TAS1 419 aaKnown RBP16.5■□□□□ 0.23
MSH5-203ENST00000375750 DCAF4Q8WV16 495 aa16.5■□□□□ 0.23
MSH5-203ENST00000375750 REEP2Q9BRK0 252 aa16.5■□□□□ 0.23
MSH5-203ENST00000375750 GJA3Q9Y6H8 435 aa16.5■□□□□ 0.23
MSH5-203ENST00000375750 GNA14O95837 355 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 GIT2Q14161 759 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 TNIP1Q15025 636 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 QRICH1Q2TAL8 776 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 ACER1Q8TDN7 264 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 PBKQ96KB5 322 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 CCDC114Q96M63 670 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 KLC4Q9NSK0 619 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 HAUS2Q9NVX0 235 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 PPP1R9AQ9ULJ8 1098 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 FER1L6Q2WGJ9 1857 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 hCG_1984214I3L0E3 225 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 OPLAHO14841 1288 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 TRAPPC3O43617 180 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 FGGP02679 453 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 CCDC121Q6ZUS5 278 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 SAMD7Q7Z3H4 446 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 TMC3Q7Z5M5 1100 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 DHX37Q8IY37 1157 aaKnown RBP16.49■□□□□ 0.23
MSH5-203ENST00000375750 ZNF713Q8N859 430 aaPredicted RBP16.49■□□□□ 0.23
MSH5-203ENST00000375750 LNX1Q8TBB1 728 aaPredicted RBP16.49■□□□□ 0.23
MSH5-203ENST00000375750 GLG1Q92896 1179 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 SEC16BQ96JE7 1060 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 CHORDC1Q9UHD1 332 aaPredicted RBP16.49■□□□□ 0.23
MSH5-203ENST00000375750 STXBP5LQ9Y2K9 1186 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 COL2A1P02458 1487 aaPredicted RBP16.49■□□□□ 0.23
MSH5-203ENST00000375750 GALCP54803 685 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 PPP2R2AP63151 447 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 IKQ13123 557 aaPredicted RBP16.49■□□□□ 0.23
MSH5-203ENST00000375750 CUL1Q13616 776 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 EPHA7Q15375 998 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 PRR16Q569H4 304 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 KIAA1755Q5JYT7 1200 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 DCAF12L1Q5VU92 463 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 LRIG3Q6UXM1 1119 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 NT5DC3Q86UY8 548 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 GLYCTKQ8IVS8 523 aa16.49■□□□□ 0.23
MSH5-203ENST00000375750 ZKSCAN4Q969J2 545 aaPredicted RBP16.49■□□□□ 0.23
MSH5-203ENST00000375750 ERVK-5Q9HDB9 667 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms