RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 F8VZ95 297 aa15.82■□□□□ 0.12
MSH5-201ENST00000375703 H0YGN5 161 aa15.82■□□□□ 0.12
MSH5-201ENST00000375703 DAPK3O43293 454 aa15.82■□□□□ 0.12
MSH5-201ENST00000375703 CFBP00751 764 aa15.82■□□□□ 0.12
MSH5-201ENST00000375703 HPDP32754 393 aaPredicted RBP15.82■□□□□ 0.12
MSH5-201ENST00000375703 HDLBPQ00341 1268 aaKnown RBP15.82■□□□□ 0.12
MSH5-201ENST00000375703 UAP1Q16222 522 aaPredicted RBP15.82■□□□□ 0.12
MSH5-201ENST00000375703 STRIP1Q5VSL9 837 aa15.82■□□□□ 0.12
MSH5-201ENST00000375703 ZNF720Q7Z2F6 126 aa15.82■□□□□ 0.12
MSH5-201ENST00000375703 MKNK1Q9BUB5 465 aa15.82■□□□□ 0.12
MSH5-201ENST00000375703 WDR18Q9BV38 432 aa15.82■□□□□ 0.12
MSH5-201ENST00000375703 FRMD4BQ9Y2L6 1034 aa15.82■□□□□ 0.12
MSH5-201ENST00000375703 NFS1Q9Y697 457 aa15.82■□□□□ 0.12
MSH5-201ENST00000375703 BUB1BO60566 1050 aaPredicted RBP15.81■□□□□ 0.12
MSH5-201ENST00000375703 PTGISQ16647 500 aa15.81■□□□□ 0.12
MSH5-201ENST00000375703 HS2ST1Q7LGA3 356 aa15.81■□□□□ 0.12
MSH5-201ENST00000375703 UBLCP1Q8WVY7 318 aaPredicted RBP15.81■□□□□ 0.12
MSH5-201ENST00000375703 A0A1W2PRG0 241 aa15.81■□□□□ 0.12
MSH5-201ENST00000375703 TTI1O43156 1089 aa15.81■□□□□ 0.12
MSH5-201ENST00000375703 ONECUT3O60422 494 aaPredicted RBP15.81■□□□□ 0.12
MSH5-201ENST00000375703 NPM3O75607 178 aaKnown RBP15.81■□□□□ 0.12
MSH5-201ENST00000375703 PSMD10O75832 226 aa15.81■□□□□ 0.12
MSH5-201ENST00000375703 ABCB4P21439 1286 aa15.81■□□□□ 0.12
MSH5-201ENST00000375703 INPP5BP32019 993 aa15.81■□□□□ 0.12
MSH5-201ENST00000375703 FLT3P36888 993 aa15.81■□□□□ 0.12
MSH5-201ENST00000375703 CYP2J2P51589 502 aa15.81■□□□□ 0.12
MSH5-201ENST00000375703 KCTD19Q17RG1 926 aaPredicted RBP15.81■□□□□ 0.12
MSH5-201ENST00000375703 FAM178BQ8IXR5 827 aa15.81■□□□□ 0.12
MSH5-201ENST00000375703 ARFGAP2Q8N6H7 521 aa15.81■□□□□ 0.12
MSH5-201ENST00000375703 CTNNBL1Q8WYA6 563 aaPredicted RBP15.81■□□□□ 0.12
MSH5-201ENST00000375703 FGGP02679 453 aa15.81■□□□□ 0.12
MSH5-201ENST00000375703 TMEM253P0C7T8 217 aa15.81■□□□□ 0.12
MSH5-201ENST00000375703 CCDC172P0C7W6 258 aa15.81■□□□□ 0.12
MSH5-201ENST00000375703 PDE6BP35913 854 aa15.81■□□□□ 0.12
MSH5-201ENST00000375703 CBWD6Q4V339 395 aa15.81■□□□□ 0.12
MSH5-201ENST00000375703 CBWD3Q5JTY5 395 aa15.81■□□□□ 0.12
MSH5-201ENST00000375703 CBWD5Q5RIA9 395 aa15.81■□□□□ 0.12
MSH5-201ENST00000375703 DACT2Q5SW24 774 aa15.81■□□□□ 0.12
MSH5-201ENST00000375703 STXBP4Q6ZWJ1 553 aa15.81■□□□□ 0.12
MSH5-201ENST00000375703 SPATS2Q86XZ4 545 aaKnown RBP15.81■□□□□ 0.12
MSH5-201ENST00000375703 RFFLQ8WZ73 363 aa15.81■□□□□ 0.12
MSH5-201ENST00000375703 BCCIPQ9P287 314 aaKnown RBP eCLIP15.81■□□□□ 0.12
MSH5-201ENST00000375703 SEL1LQ9UBV2 794 aa15.81■□□□□ 0.12
MSH5-201ENST00000375703 UTP11Q9Y3A2 253 aaKnown RBP15.81■□□□□ 0.12
MSH5-201ENST00000375703 TNFAIP3P21580 790 aa15.8■□□□□ 0.12
MSH5-201ENST00000375703 SEC24CP53992 1094 aa15.8■□□□□ 0.12
MSH5-201ENST00000375703 PPP2R5CQ13362 524 aa15.8■□□□□ 0.12
MSH5-201ENST00000375703 MTMR3Q13615 1198 aa15.8■□□□□ 0.12
MSH5-201ENST00000375703 NAA35Q5VZE5 725 aa15.8■□□□□ 0.12
MSH5-201ENST00000375703 RUFY4Q6ZNE9 571 aa15.8■□□□□ 0.12
MSH5-201ENST00000375703 NLGN1Q8N2Q7 840 aa15.8■□□□□ 0.12
MSH5-201ENST00000375703 ZNF622Q969S3 477 aaKnown RBP eCLIP15.8■□□□□ 0.129e-12■□□□□ 10.4
MSH5-201ENST00000375703 MASTLQ96GX5 879 aa15.8■□□□□ 0.12
MSH5-201ENST00000375703 CCT8L2Q96SF2 557 aa15.8■□□□□ 0.12
MSH5-201ENST00000375703 CELF4Q9BZC1 486 aaKnown RBP15.8■□□□□ 0.12
MSH5-201ENST00000375703 TDRD3Q9H7E2 651 aaKnown RBP15.8■□□□□ 0.12
MSH5-201ENST00000375703 PPP1R9AQ9ULJ8 1098 aa15.8■□□□□ 0.12
MSH5-201ENST00000375703 ZNF844Q08AG5 666 aa15.8■□□□□ 0.12
MSH5-201ENST00000375703 ODR4Q5SWX8 454 aa15.8■□□□□ 0.12
MSH5-201ENST00000375703 MEX3CQ5U5Q3 659 aaKnown RBP15.8■□□□□ 0.12
MSH5-201ENST00000375703 OLIG1Q8TAK6 271 aa15.8■□□□□ 0.12
MSH5-201ENST00000375703 ZNF473Q8WTR7 871 aaKnown RBP15.8■□□□□ 0.12
MSH5-201ENST00000375703 NACC1Q96RE7 527 aa15.8■□□□□ 0.12
MSH5-201ENST00000375703 FIZ1Q96SL8 496 aa15.8■□□□□ 0.12
MSH5-201ENST00000375703 AGPAT3Q9NRZ7 376 aa15.8■□□□□ 0.12
MSH5-201ENST00000375703 DMAC2Q9NW81 257 aa15.8■□□□□ 0.12
MSH5-201ENST00000375703 TTC7AQ9ULT0 858 aaPredicted RBP15.8■□□□□ 0.12
MSH5-201ENST00000375703 GAS7O60861 476 aa15.79■□□□□ 0.12
MSH5-201ENST00000375703 KIAA0754O94854 1291 aa15.79■□□□□ 0.12
MSH5-201ENST00000375703 TRIM49P0CI25 452 aa15.79■□□□□ 0.12
MSH5-201ENST00000375703 TRIM49CP0CI26 452 aa15.79■□□□□ 0.12
MSH5-201ENST00000375703 PRELPP51888 382 aa15.79■□□□□ 0.12
MSH5-201ENST00000375703 STAT2P52630 851 aa15.79■□□□□ 0.12
MSH5-201ENST00000375703 FKBP1AP62942 108 aaKnown RBP15.79■□□□□ 0.12
MSH5-201ENST00000375703 UBXN2AP68543 259 aa15.79■□□□□ 0.12
MSH5-201ENST00000375703 PPATQ06203 517 aa15.79■□□□□ 0.12
MSH5-201ENST00000375703 TRAF1Q13077 416 aa15.79■□□□□ 0.12
MSH5-201ENST00000375703 PRPF4BQ13523 1007 aaKnown RBP15.79■□□□□ 0.12
MSH5-201ENST00000375703 RRP1BQ14684 758 aaKnown RBP15.79■□□□□ 0.12
MSH5-201ENST00000375703 ARHGAP44Q17R89 818 aa15.79■□□□□ 0.12
MSH5-201ENST00000375703 NLRP14Q86W24 1093 aa15.79■□□□□ 0.12
MSH5-201ENST00000375703 OTUD6BQ8N6M0 293 aa15.79■□□□□ 0.12
MSH5-201ENST00000375703 RDH13Q8NBN7 331 aa15.79■□□□□ 0.12
MSH5-201ENST00000375703 SLC5A5Q92911 643 aa15.79■□□□□ 0.12
MSH5-201ENST00000375703 INTS2Q9H0H0 1204 aaKnown RBP15.79■□□□□ 0.12
MSH5-201ENST00000375703 DPH5Q9H2P9 285 aa15.79■□□□□ 0.12
MSH5-201ENST00000375703 FAM114A2Q9NRY5 505 aa15.79■□□□□ 0.12
MSH5-201ENST00000375703 SEPT11Q9NVA2 429 aaKnown RBP15.79■□□□□ 0.12
MSH5-201ENST00000375703 DIS3Q9Y2L1 958 aaKnown RBP15.79■□□□□ 0.12
MSH5-201ENST00000375703 POLR2MP0CAP2 368 aa15.79■□□□□ 0.12
MSH5-201ENST00000375703 BIRC3Q13489 604 aa15.79■□□□□ 0.12
MSH5-201ENST00000375703 PPP2R5AQ15172 486 aa15.79■□□□□ 0.12
MSH5-201ENST00000375703 ODF2Q5BJF6 829 aa15.79■□□□□ 0.12
MSH5-201ENST00000375703 MICALCLQ6ZW33 695 aa15.79■□□□□ 0.12
MSH5-201ENST00000375703 FMNL3Q8IVF7 1028 aa15.79■□□□□ 0.12
MSH5-201ENST00000375703 GPR88Q9GZN0 384 aa15.79■□□□□ 0.12
MSH5-201ENST00000375703 APEX2Q9UBZ4 518 aa15.79■□□□□ 0.12
MSH5-201ENST00000375703 SERPINA10Q9UK55 444 aa15.79■□□□□ 0.12
MSH5-201ENST00000375703 NCANO14594 1321 aa15.79■□□□□ 0.12
MSH5-201ENST00000375703 SIPA1L1O43166 1804 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms