RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 LRRC37AA6NMS7 1700 aa13.18□□□□□ -0.3
C9orf3-203ENST00000375315 SMCO2A6NFE2 343 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 PYGBP11216 843 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 KIF11P52732 1056 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 UBE2SQ16763 222 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 PFKFB3Q16875 520 aaPredicted RBP13.17□□□□□ -0.3
C9orf3-203ENST00000375315 PPP1R15BQ5SWA1 713 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 PIGWQ7Z7B1 504 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 KLHL29Q96CT2 875 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 IDI2Q9BXS1 227 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 MAPK8IP1Q9UQF2 711 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 C2CD2Q9Y426 696 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 CD2APQ9Y5K6 639 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 CCDC194A0A1B0GVG4 234 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 PALM3A6NDB9 673 aaPredicted RBP13.17□□□□□ -0.3
C9orf3-203ENST00000375315 IGF2BP3O00425 579 aaKnown RBP eCLIP13.17□□□□□ -0.3
C9orf3-203ENST00000375315 HIP1RO75146 1068 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 PCK1P35558 622 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 EPS15P42566 896 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 MAGEA1P43355 309 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 NCALDP61601 193 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 TNIP1Q15025 636 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 UAP1Q16222 522 aaPredicted RBP13.17□□□□□ -0.3
C9orf3-203ENST00000375315 ILDR2Q71H61 639 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 RBM12BQ8IXT5 1001 aaKnown RBP13.17□□□□□ -0.3
C9orf3-203ENST00000375315 PRCCQ92733 491 aaPredicted RBP13.17□□□□□ -0.3
C9orf3-203ENST00000375315 TRIM47Q96LD4 638 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 MTA3Q9BTC8 594 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 ECT2Q9H8V3 914 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 LTBP1Q14766 1721 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 A0A1W2PQJ5 194 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 A0A1W2PRG0 241 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 RAD51CO43502 376 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 PRCPP42785 496 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 KLHDC7AQ5VTJ3 777 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 NUGGCQ68CJ6 796 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 RNF10Q8N5U6 811 aaKnown RBP13.17□□□□□ -0.3
C9orf3-203ENST00000375315 GBP7Q8N8V2 638 aaPredicted RBP13.17□□□□□ -0.3
C9orf3-203ENST00000375315 ZNF317Q96PQ6 595 aaPredicted RBP13.17□□□□□ -0.3
C9orf3-203ENST00000375315 PHF20Q9BVI0 1012 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 RNF181Q9P0P0 153 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 WDR35Q9P2L0 1181 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 AGAP1Q9UPQ3 857 aa13.17□□□□□ -0.3
C9orf3-203ENST00000375315 EIF4E1BA6NMX2 242 aaKnown RBP13.16□□□□□ -0.3
C9orf3-203ENST00000375315 F5H6K3 240 aa13.16□□□□□ -0.3
C9orf3-203ENST00000375315 MMEP08473 750 aa13.16□□□□□ -0.3
C9orf3-203ENST00000375315 KLRC3Q07444 240 aa13.16□□□□□ -0.3
C9orf3-203ENST00000375315 TRADDQ15628 312 aa13.16□□□□□ -0.3
C9orf3-203ENST00000375315 SGSM1Q2NKQ1 1148 aa13.16□□□□□ -0.3
C9orf3-203ENST00000375315 LETM2Q2VYF4 491 aa13.16□□□□□ -0.3
C9orf3-203ENST00000375315 FIGNQ5HY92 759 aa13.16□□□□□ -0.3
C9orf3-203ENST00000375315 NCAPG2Q86XI2 1143 aa13.16□□□□□ -0.3
C9orf3-203ENST00000375315 ADGRF4Q8IZF3 695 aa13.16□□□□□ -0.3
C9orf3-203ENST00000375315 BLIDQ8IZY5 108 aa13.16□□□□□ -0.3
C9orf3-203ENST00000375315 FBF1Q8TES7 1133 aa13.16□□□□□ -0.3
C9orf3-203ENST00000375315 ELAC2Q9BQ52 826 aaKnown RBP13.16□□□□□ -0.3
C9orf3-203ENST00000375315 TUBGCP2Q9BSJ2 902 aa13.16□□□□□ -0.3
C9orf3-203ENST00000375315 G3BP2Q9UN86 482 aaKnown RBP13.16□□□□□ -0.3
C9orf3-203ENST00000375315 ASB3Q9Y575 518 aa13.16□□□□□ -0.3
C9orf3-203ENST00000375315 ROBO3Q96MS0 1386 aa13.16□□□□□ -0.3
C9orf3-203ENST00000375315 RPN1P04843 607 aaKnown RBP13.16□□□□□ -0.3
C9orf3-203ENST00000375315 GBP1P32455 592 aa13.16□□□□□ -0.3
C9orf3-203ENST00000375315 GNAQP50148 359 aa13.16□□□□□ -0.3
C9orf3-203ENST00000375315 ANGEL2Q5VTE6 544 aaKnown RBP13.16□□□□□ -0.3
C9orf3-203ENST00000375315 HACL1Q9UJ83 578 aa13.16□□□□□ -0.3
C9orf3-203ENST00000375315 FBXL5Q9UKA1 691 aa13.16□□□□□ -0.3
C9orf3-203ENST00000375315 STK38LQ9Y2H1 464 aa13.16□□□□□ -0.3
C9orf3-203ENST00000375315 GDAQ9Y2T3 454 aa13.16□□□□□ -0.3
C9orf3-203ENST00000375315 UBOX5O94941 541 aa13.15□□□□□ -0.3
C9orf3-203ENST00000375315 MSH2P43246 934 aa13.15□□□□□ -0.3
C9orf3-203ENST00000375315 MTA1Q13330 715 aa13.15□□□□□ -0.3
C9orf3-203ENST00000375315 CCDC178Q5BJE1 867 aa13.15□□□□□ -0.3
C9orf3-203ENST00000375315 NBPF12Q5TAG4 269 aaPredicted RBP13.15□□□□□ -0.3
C9orf3-203ENST00000375315 ANO7Q6IWH7 933 aa13.15□□□□□ -0.3
C9orf3-203ENST00000375315 KLHL7Q8IXQ5 586 aa13.15□□□□□ -0.3
C9orf3-203ENST00000375315 MDM1Q8TC05 714 aa13.15□□□□□ -0.3
C9orf3-203ENST00000375315 GJA10Q969M2 543 aa13.15□□□□□ -0.3
C9orf3-203ENST00000375315 RAB17Q9H0T7 212 aa13.15□□□□□ -0.3
C9orf3-203ENST00000375315 VCXQ9H320 206 aa13.15□□□□□ -0.3
C9orf3-203ENST00000375315 TRIM49BA6NDI0 452 aa13.15□□□□□ -0.3
C9orf3-203ENST00000375315 SPDYE5A6NIY4 337 aa13.15□□□□□ -0.3
C9orf3-203ENST00000375315 PJA2O43164 708 aa13.15□□□□□ -0.3
C9orf3-203ENST00000375315 UPP2O95045 317 aa13.15□□□□□ -0.3
C9orf3-203ENST00000375315 PLEKP08567 350 aaPredicted RBP13.15□□□□□ -0.3
C9orf3-203ENST00000375315 RARAP10276 462 aa13.15□□□□□ -0.3
C9orf3-203ENST00000375315 EIF4A3P38919 411 aaKnown RBP13.15□□□□□ -0.3
C9orf3-203ENST00000375315 TNNI2P48788 182 aa13.15□□□□□ -0.3
C9orf3-203ENST00000375315 PTGDRQ13258 359 aa13.15□□□□□ -0.3
C9orf3-203ENST00000375315 PPP2R5BQ15173 497 aa13.15□□□□□ -0.3
C9orf3-203ENST00000375315 APBB1IPQ7Z5R6 666 aaPredicted RBP13.15□□□□□ -0.3
C9orf3-203ENST00000375315 TRPM4Q8TD43 1214 aa13.15□□□□□ -0.3
C9orf3-203ENST00000375315 KCNV2Q8TDN2 545 aa13.15□□□□□ -0.3
C9orf3-203ENST00000375315 SYT17Q9BSW7 474 aa13.15□□□□□ -0.3
C9orf3-203ENST00000375315 KANSL2Q9H9L4 492 aa13.15□□□□□ -0.3
C9orf3-203ENST00000375315 TCP11L1Q9NUJ3 509 aa13.15□□□□□ -0.3
C9orf3-203ENST00000375315 ADAM22Q9P0K1 906 aa13.15□□□□□ -0.3
C9orf3-203ENST00000375315 PLAGL2Q9UPG8 496 aa13.15□□□□□ -0.3
C9orf3-203ENST00000375315 TIAM2Q8IVF5 1701 aa13.15□□□□□ -0.3
C9orf3-203ENST00000375315 PCNTO95613 3336 aa13.15□□□□□ -0.3
C9orf3-203ENST00000375315 NAV1Q8NEY1 1877 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms