RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 RHPN2Q8IUC4 686 aa13.4□□□□□ -0.26
HDAC8-201ENST00000373554 PIGOQ8TEQ8 1089 aa13.4□□□□□ -0.26
HDAC8-201ENST00000373554 NACC1Q96RE7 527 aa13.4□□□□□ -0.26
HDAC8-201ENST00000373554 TTYH1Q9H313 450 aaPredicted RBP13.4□□□□□ -0.26
HDAC8-201ENST00000373554 ADAMTS10Q9H324 1103 aa13.4□□□□□ -0.26
HDAC8-201ENST00000373554 ATP6V0A4Q9HBG4 840 aa13.4□□□□□ -0.26
HDAC8-201ENST00000373554 ERVK-5Q9HDB9 667 aa13.4□□□□□ -0.26
HDAC8-201ENST00000373554 MTMR10Q9NXD2 777 aa13.4□□□□□ -0.26
HDAC8-201ENST00000373554 ST3GAL5Q9UNP4 418 aa13.4□□□□□ -0.26
HDAC8-201ENST00000373554 MTMR6Q9Y217 621 aa13.4□□□□□ -0.26
HDAC8-201ENST00000373554 NOC2LQ9Y3T9 749 aaKnown RBP13.4□□□□□ -0.26
HDAC8-201ENST00000373554 LAMA2P24043 3122 aaKnown RBP13.4□□□□□ -0.26
HDAC8-201ENST00000373554 GBF1Q92538 1859 aa13.4□□□□□ -0.26
HDAC8-201ENST00000373554 PTPRSQ13332 1948 aa13.39□□□□□ -0.27
HDAC8-201ENST00000373554 VWA3AA6NCI4 1184 aa13.39□□□□□ -0.27
HDAC8-201ENST00000373554 UPP2O95045 317 aa13.39□□□□□ -0.27
HDAC8-201ENST00000373554 PDIA4P13667 645 aaKnown RBP13.39□□□□□ -0.27
HDAC8-201ENST00000373554 MYOGP15173 224 aa13.39□□□□□ -0.27
HDAC8-201ENST00000373554 RESTQ13127 1097 aa13.39□□□□□ -0.27
HDAC8-201ENST00000373554 FAM228AQ86W67 206 aa13.39□□□□□ -0.27
HDAC8-201ENST00000373554 TOP1MTQ969P6 601 aa13.39□□□□□ -0.27
HDAC8-201ENST00000373554 TMEM143Q96AN5 459 aa13.39□□□□□ -0.27
HDAC8-201ENST00000373554 ZNF668Q96K58 619 aaPredicted RBP13.39□□□□□ -0.27
HDAC8-201ENST00000373554 NLRP4Q96MN2 994 aa13.39□□□□□ -0.27
HDAC8-201ENST00000373554 RAD9AQ99638 391 aa13.39□□□□□ -0.27
HDAC8-201ENST00000373554 GCOM2Q9BZD3 368 aaPredicted RBP13.39□□□□□ -0.27
HDAC8-201ENST00000373554 SEMA6BQ9H3T3 888 aa13.39□□□□□ -0.27
HDAC8-201ENST00000373554 ZSCAN16Q9H4T2 348 aaPredicted RBP13.39□□□□□ -0.27
HDAC8-201ENST00000373554 DBR1Q9UK59 544 aaKnown RBP13.39□□□□□ -0.27
HDAC8-201ENST00000373554 INSL6Q9Y581 213 aa13.39□□□□□ -0.27
HDAC8-201ENST00000373554 COL4A3BPQ9Y5P4 624 aa13.39□□□□□ -0.27
HDAC8-201ENST00000373554 A0A087WZ62 844 aa13.38□□□□□ -0.27
HDAC8-201ENST00000373554 DENND3A2RUS2 1198 aa13.38□□□□□ -0.27
HDAC8-201ENST00000373554 ARHGEF35A5YM69 484 aa13.38□□□□□ -0.27
HDAC8-201ENST00000373554 ENPP3O14638 875 aa13.38□□□□□ -0.27
HDAC8-201ENST00000373554 USO1O60763 962 aaKnown RBP13.38□□□□□ -0.27
HDAC8-201ENST00000373554 DARSP14868 501 aaKnown RBP13.38□□□□□ -0.27
HDAC8-201ENST00000373554 SFPQP23246 707 aaKnown RBP eCLIP13.38□□□□□ -0.27
HDAC8-201ENST00000373554 SF3A1Q15459 793 aaKnown RBP13.38□□□□□ -0.27
HDAC8-201ENST00000373554 LINC01599Q8WXQ3 324 aa13.38□□□□□ -0.27
HDAC8-201ENST00000373554 YME1L1Q96TA2 773 aa13.38□□□□□ -0.27
HDAC8-201ENST00000373554 FDXACB1Q9BRP7 624 aaPredicted RBP13.38□□□□□ -0.27
HDAC8-201ENST00000373554 INO80BQ9C086 356 aaPredicted RBP13.38□□□□□ -0.27
HDAC8-201ENST00000373554 TSPYL2Q9H2G4 693 aaPredicted RBP13.38□□□□□ -0.27
HDAC8-201ENST00000373554 TMX1Q9H3N1 280 aa13.38□□□□□ -0.27
HDAC8-201ENST00000373554 C1orf112Q9NSG2 853 aa13.38□□□□□ -0.27
HDAC8-201ENST00000373554 RNF216Q9NWF9 866 aaPredicted RBP13.38□□□□□ -0.27
HDAC8-201ENST00000373554 A0A087WWV3 80 aa13.37□□□□□ -0.27
HDAC8-201ENST00000373554 PP2D1A8MPX8 630 aa13.37□□□□□ -0.27
HDAC8-201ENST00000373554 ASAP2O43150 1006 aa13.37□□□□□ -0.27
HDAC8-201ENST00000373554 MXD4Q14582 209 aaPredicted RBP13.37□□□□□ -0.27
HDAC8-201ENST00000373554 IL17AQ16552 155 aa13.37□□□□□ -0.27
HDAC8-201ENST00000373554 KSR1Q8IVT5 923 aa13.37□□□□□ -0.27
HDAC8-201ENST00000373554 MCPH1Q8NEM0 835 aa13.37□□□□□ -0.27
HDAC8-201ENST00000373554 PRPF31Q8WWY3 499 aaKnown RBP13.37□□□□□ -0.27
HDAC8-201ENST00000373554 CDK5RAP3Q96JB5 506 aa13.37□□□□□ -0.27
HDAC8-201ENST00000373554 AK8Q96MA6 479 aa13.37□□□□□ -0.27
HDAC8-201ENST00000373554 GUCD1Q96NT3 240 aa13.37□□□□□ -0.27
HDAC8-201ENST00000373554 ADAM2Q99965 735 aa13.37□□□□□ -0.27
HDAC8-201ENST00000373554 XPNPEP1Q9NQW7 623 aa13.37□□□□□ -0.27
HDAC8-201ENST00000373554 DDX19AQ9NUU7 478 aaKnown RBP13.37□□□□□ -0.27
HDAC8-201ENST00000373554 KIAA1024Q9UPX6 916 aa13.37□□□□□ -0.27
HDAC8-201ENST00000373554 LOXHD1Q8IVV2 1947 aa13.37□□□□□ -0.27
HDAC8-201ENST00000373554 LCHNA4D1U4 455 aa13.36□□□□□ -0.27
HDAC8-201ENST00000373554 STAG3L1P0CL83 205 aa13.36□□□□□ -0.27
HDAC8-201ENST00000373554 SRGAP2CP0DJJ0 459 aa13.36□□□□□ -0.27
HDAC8-201ENST00000373554 ZSCAN20P17040 1043 aaPredicted RBP13.36□□□□□ -0.27
HDAC8-201ENST00000373554 CDC25AP30304 524 aa13.36□□□□□ -0.27
HDAC8-201ENST00000373554 PHKA2P46019 1235 aa13.36□□□□□ -0.27
HDAC8-201ENST00000373554 HTRA4P83105 476 aaPredicted RBP13.36□□□□□ -0.27
HDAC8-201ENST00000373554 LAMTOR4Q0VGL1 99 aa13.36□□□□□ -0.27
HDAC8-201ENST00000373554 TFDP1Q14186 410 aa13.36□□□□□ -0.27
HDAC8-201ENST00000373554 GRIN2CQ14957 1233 aa13.36□□□□□ -0.27
HDAC8-201ENST00000373554 ZRSR1Q15695 479 aaKnown RBP13.36□□□□□ -0.27
HDAC8-201ENST00000373554 FAM173BQ6P4H8 233 aa13.36□□□□□ -0.27
HDAC8-201ENST00000373554 PADI6Q6TGC4 694 aa13.36□□□□□ -0.27
HDAC8-201ENST00000373554 SLC24A5Q71RS6 500 aa13.36□□□□□ -0.27
HDAC8-201ENST00000373554 NPAS4Q8IUM7 802 aa13.36□□□□□ -0.27
HDAC8-201ENST00000373554 RNF149Q8NC42 400 aa13.36□□□□□ -0.27
HDAC8-201ENST00000373554 SPRYD3Q8NCJ5 442 aa13.36□□□□□ -0.27
HDAC8-201ENST00000373554 CDX2Q99626 313 aaPredicted RBP13.36□□□□□ -0.27
HDAC8-201ENST00000373554 NT5C3AQ9H0P0 336 aa13.36□□□□□ -0.27
HDAC8-201ENST00000373554 BHMT2Q9H2M3 363 aa13.36□□□□□ -0.27
HDAC8-201ENST00000373554 RGS18Q9NS28 235 aa13.36□□□□□ -0.27
HDAC8-201ENST00000373554 LRFN2Q9ULH4 789 aa13.36□□□□□ -0.27
HDAC8-201ENST00000373554 DNM3Q9UQ16 869 aa13.36□□□□□ -0.27
HDAC8-201ENST00000373554 COL4A6Q14031 1691 aa13.36□□□□□ -0.27
HDAC8-201ENST00000373554 MGEA5O60502 916 aa13.35□□□□□ -0.27
HDAC8-201ENST00000373554 IBSPP21815 317 aaPredicted RBP13.35□□□□□ -0.27
HDAC8-201ENST00000373554 FGFR4P22455 802 aa13.35□□□□□ -0.27
HDAC8-201ENST00000373554 LONP1P36776 959 aaKnown RBP13.35□□□□□ -0.27
HDAC8-201ENST00000373554 UBA7P41226 1012 aa13.35□□□□□ -0.27
HDAC8-201ENST00000373554 SARSP49591 514 aaKnown RBP13.35□□□□□ -0.27
HDAC8-201ENST00000373554 TAP1Q03518 808 aa13.35□□□□□ -0.27
HDAC8-201ENST00000373554 ECM1Q16610 540 aa13.35□□□□□ -0.27
HDAC8-201ENST00000373554 MAEAQ7L5Y9 396 aa13.35□□□□□ -0.27
HDAC8-201ENST00000373554 CATSPER4Q7RTX7 472 aa13.35□□□□□ -0.27
HDAC8-201ENST00000373554 SRGAP1Q7Z6B7 1085 aa13.35□□□□□ -0.27
HDAC8-201ENST00000373554 RTN4RL1Q86UN2 441 aaPredicted RBP13.35□□□□□ -0.27
HDAC8-201ENST00000373554 KCTD17Q8N5Z5 321 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms