RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 ATP6V0A1Q93050 837 aa21.44■■□□□ 1.02
HDAC1-201ENST00000373548 ST6GALNAC4Q9H4F1 302 aa21.44■■□□□ 1.02
HDAC1-201ENST00000373548 TMEM206Q9H813 350 aa21.44■■□□□ 1.02
HDAC1-201ENST00000373548 AIPL1Q9NZN9 384 aa21.44■■□□□ 1.02
HDAC1-201ENST00000373548 FBXO40Q9UH90 709 aa21.44■■□□□ 1.02
HDAC1-201ENST00000373548 FRMD4BQ9Y2L6 1034 aa21.44■■□□□ 1.02
HDAC1-201ENST00000373548 DUSP10Q9Y6W6 482 aa21.44■■□□□ 1.02
HDAC1-201ENST00000373548 MYH9P35579 1960 aaKnown RBP21.44■■□□□ 1.02
HDAC1-201ENST00000373548 PFASO15067 1338 aa21.44■■□□□ 1.02
HDAC1-201ENST00000373548 GTPBP10A4D1E9 387 aaKnown RBP21.44■■□□□ 1.02
HDAC1-201ENST00000373548 PSAPP07602 524 aa21.44■■□□□ 1.02
HDAC1-201ENST00000373548 UCHL3P15374 230 aa21.44■■□□□ 1.02
HDAC1-201ENST00000373548 ACTR2P61160 394 aa21.44■■□□□ 1.02
HDAC1-201ENST00000373548 GTF2BQ00403 316 aa21.44■■□□□ 1.02
HDAC1-201ENST00000373548 SP4Q02446 784 aa21.44■■□□□ 1.02
HDAC1-201ENST00000373548 KIF5AQ12840 1032 aa21.44■■□□□ 1.02
HDAC1-201ENST00000373548 STXBP2Q15833 593 aa21.44■■□□□ 1.02
HDAC1-201ENST00000373548 FAM102BQ5T8I3 360 aa21.44■■□□□ 1.02
HDAC1-201ENST00000373548 SWSAP1Q6NVH7 229 aa21.44■■□□□ 1.02
HDAC1-201ENST00000373548 HAUS6Q7Z4H7 955 aa21.44■■□□□ 1.02
HDAC1-201ENST00000373548 ACCSQ96QU6 501 aa21.44■■□□□ 1.02
HDAC1-201ENST00000373548 SPATC1LQ9H0A9 340 aa21.44■■□□□ 1.02
HDAC1-201ENST00000373548 PDCL3Q9H2J4 239 aa21.44■■□□□ 1.02
HDAC1-201ENST00000373548 SIX2Q9NPC8 291 aa21.44■■□□□ 1.02
HDAC1-201ENST00000373548 CGNQ9P2M7 1197 aaKnown RBP21.44■■□□□ 1.02
HDAC1-201ENST00000373548 CXCL11O14625 94 aa21.43■■□□□ 1.02
HDAC1-201ENST00000373548 EPHX2P34913 555 aa21.43■■□□□ 1.02
HDAC1-201ENST00000373548 NF2P35240 595 aa21.43■■□□□ 1.02
HDAC1-201ENST00000373548 NCKAP1LP55160 1127 aa21.43■■□□□ 1.02
HDAC1-201ENST00000373548 PEX3P56589 373 aa21.43■■□□□ 1.02
HDAC1-201ENST00000373548 IRX3P78415 501 aaPredicted RBP21.43■■□□□ 1.02
HDAC1-201ENST00000373548 SP2Q02086 613 aa21.43■■□□□ 1.02
HDAC1-201ENST00000373548 MYBPC2Q14324 1141 aa21.43■■□□□ 1.02
HDAC1-201ENST00000373548 ABHD15Q6UXT9 468 aa21.43■■□□□ 1.02
HDAC1-201ENST00000373548 CCDC60Q8IWA6 550 aaPredicted RBP21.43■■□□□ 1.02
HDAC1-201ENST00000373548 EHBP1Q8NDI1 1231 aa21.43■■□□□ 1.02
HDAC1-201ENST00000373548 UBXN4Q92575 508 aa21.43■■□□□ 1.02
HDAC1-201ENST00000373548 TSGA10Q9BZW7 698 aa21.43■■□□□ 1.02
HDAC1-201ENST00000373548 GCNT4Q9P109 453 aa21.43■■□□□ 1.02
HDAC1-201ENST00000373548 FHOD1Q9Y613 1164 aa21.43■■□□□ 1.02
HDAC1-201ENST00000373548 TISP43B9A030 160 aa21.43■■□□□ 1.02
HDAC1-201ENST00000373548 SLC16A4O15374 487 aa21.43■■□□□ 1.02
HDAC1-201ENST00000373548 SORBS3O60504 671 aa21.43■■□□□ 1.02
HDAC1-201ENST00000373548 EIF3JO75822 258 aaKnown RBP21.43■■□□□ 1.02
HDAC1-201ENST00000373548 ICAM3P32942 547 aa21.43■■□□□ 1.02
HDAC1-201ENST00000373548 ALDH5A1P51649 535 aaPredicted RBP21.43■■□□□ 1.02
HDAC1-201ENST00000373548 AMPD2Q01433 879 aa21.43■■□□□ 1.02
HDAC1-201ENST00000373548 GFPT1Q06210 699 aaPredicted RBP21.43■■□□□ 1.02
HDAC1-201ENST00000373548 TUBB2AQ13885 445 aa21.43■■□□□ 1.02
HDAC1-201ENST00000373548 TTLL12Q14166 644 aaPredicted RBP21.43■■□□□ 1.02
HDAC1-201ENST00000373548 OTUD6AQ7L8S5 288 aa21.43■■□□□ 1.02
HDAC1-201ENST00000373548 ZC3H15Q8WU90 426 aaKnown RBP21.43■■□□□ 1.02
HDAC1-201ENST00000373548 TUBB2BQ9BVA1 445 aa21.43■■□□□ 1.02
HDAC1-201ENST00000373548 ASCC2Q9H1I8 757 aaPredicted RBP21.43■■□□□ 1.02
HDAC1-201ENST00000373548 EXOC3O60645 756 aa21.42■■□□□ 1.02
HDAC1-201ENST00000373548 DKC1O60832 514 aaKnown RBP eCLIP21.42■■□□□ 1.02
HDAC1-201ENST00000373548 FAM133AQ8N9E0 248 aa21.42■■□□□ 1.02
HDAC1-201ENST00000373548 CEP170P1Q96L14 293 aa21.42■■□□□ 1.02
HDAC1-201ENST00000373548 KCNH4Q9UQ05 1017 aa21.42■■□□□ 1.02
HDAC1-201ENST00000373548 RBAK-RBAKDNI3L0D1 243 aa21.41■■□□□ 1.02
HDAC1-201ENST00000373548 FMO5P49326 533 aa21.41■■□□□ 1.02
HDAC1-201ENST00000373548 PPP2R5AQ15172 486 aa21.41■■□□□ 1.02
HDAC1-201ENST00000373548 ASIC2Q16515 512 aa21.41■■□□□ 1.02
HDAC1-201ENST00000373548 NCAPG2Q86XI2 1143 aa21.41■■□□□ 1.02
HDAC1-201ENST00000373548 C12orf56Q8IXR9 622 aa21.41■■□□□ 1.02
HDAC1-201ENST00000373548 TMEM174Q8WUU8 243 aa21.41■■□□□ 1.02
HDAC1-201ENST00000373548 PAGR1Q9BTK6 254 aa21.41■■□□□ 1.02
HDAC1-201ENST00000373548 FBXL5Q9UKA1 691 aa21.41■■□□□ 1.02
HDAC1-201ENST00000373548 MACROD2A1Z1Q3 448 aa21.41■■□□□ 1.02
HDAC1-201ENST00000373548 CNMDO75829 334 aa21.41■■□□□ 1.02
HDAC1-201ENST00000373548 RSRC2Q7L4I2 434 aaKnown RBP21.41■■□□□ 1.02
HDAC1-201ENST00000373548 AJAP1Q9UKB5 411 aaPredicted RBP21.41■■□□□ 1.02
HDAC1-201ENST00000373548 SOWAHBA6NEL2 793 aa21.4■■□□□ 1.02
HDAC1-201ENST00000373548 TFRCP02786 760 aaKnown RBP21.4■■□□□ 1.02
HDAC1-201ENST00000373548 SUPT20HL2P0C7V6 817 aa21.4■■□□□ 1.02
HDAC1-201ENST00000373548 TRIM49P0CI25 452 aa21.4■■□□□ 1.02
HDAC1-201ENST00000373548 TRIM49CP0CI26 452 aa21.4■■□□□ 1.02
HDAC1-201ENST00000373548 MAGEA1P43355 309 aa21.4■■□□□ 1.02
HDAC1-201ENST00000373548 PRKCEQ02156 737 aa21.4■■□□□ 1.02
HDAC1-201ENST00000373548 ARID5AQ03989 594 aa21.4■■□□□ 1.02
HDAC1-201ENST00000373548 PPIL2Q13356 520 aa21.4■■□□□ 1.02
HDAC1-201ENST00000373548 MIS18BP1Q6P0N0 1132 aa21.4■■□□□ 1.02
HDAC1-201ENST00000373548 FBXO38Q6PIJ6 1188 aa21.4■■□□□ 1.02
HDAC1-201ENST00000373548 CBWD1Q9BRT8 395 aa21.4■■□□□ 1.02
HDAC1-201ENST00000373548 PCIF1Q9H4Z3 704 aa21.4■■□□□ 1.02
HDAC1-201ENST00000373548 MYO6Q9UM54 1294 aa21.4■■□□□ 1.02
HDAC1-201ENST00000373548 AGTPBP1Q9UPW5 1226 aa21.4■■□□□ 1.02
HDAC1-201ENST00000373548 IGSF9BQ9UPX0 1349 aa21.4■■□□□ 1.02
HDAC1-201ENST00000373548 PJA2O43164 708 aa21.4■■□□□ 1.02
HDAC1-201ENST00000373548 NPTX2P47972 431 aa21.4■■□□□ 1.02
HDAC1-201ENST00000373548 KLHL30Q0D2K2 578 aa21.4■■□□□ 1.02
HDAC1-201ENST00000373548 BFSP1Q12934 665 aa21.4■■□□□ 1.02
HDAC1-201ENST00000373548 SEPT14Q6ZU15 432 aa21.4■■□□□ 1.02
HDAC1-201ENST00000373548 CYFIP1Q7L576 1253 aa21.4■■□□□ 1.02
HDAC1-201ENST00000373548 SRGAP1Q7Z6B7 1085 aa21.4■■□□□ 1.02
HDAC1-201ENST00000373548 RDH13Q8NBN7 331 aa21.4■■□□□ 1.02
HDAC1-201ENST00000373548 SLC17A8Q8NDX2 589 aa21.4■■□□□ 1.02
HDAC1-201ENST00000373548 BSNDQ8WZ55 320 aa21.4■■□□□ 1.02
HDAC1-201ENST00000373548 SECISBP2LQ93073 1101 aaKnown RBP21.4■■□□□ 1.02
HDAC1-201ENST00000373548 SPAG5Q96R06 1193 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms