RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 SUFUQ9UMX1 484 aa14.3□□□□□ -0.12
RAPGEF1-201ENST00000372189 ANGPTL3Q9Y5C1 460 aa14.3□□□□□ -0.12
RAPGEF1-201ENST00000372189 MAP7D3Q8IWC1 876 aa14.3□□□□□ -0.12
RAPGEF1-201ENST00000372189 SPATA33Q96N06 139 aa14.3□□□□□ -0.12
RAPGEF1-201ENST00000372189 GCNAQ96QF7 691 aa14.3□□□□□ -0.12
RAPGEF1-201ENST00000372189 FLT1P17948 1338 aa14.3□□□□□ -0.12
RAPGEF1-201ENST00000372189 LRRIQ1Q96JM4 1722 aa14.3□□□□□ -0.12
RAPGEF1-201ENST00000372189 DENND3A2RUS2 1198 aa14.3□□□□□ -0.12
RAPGEF1-201ENST00000372189 LDHAP00338 332 aaKnown RBP14.3□□□□□ -0.12
RAPGEF1-201ENST00000372189 PNMA6AP0CW24 399 aaPredicted RBP14.3□□□□□ -0.12
RAPGEF1-201ENST00000372189 TERF2Q15554 542 aa14.3□□□□□ -0.12
RAPGEF1-201ENST00000372189 MAN2A1Q16706 1144 aa14.3□□□□□ -0.12
RAPGEF1-201ENST00000372189 CDC42EP5Q6NZY7 148 aa14.3□□□□□ -0.12
RAPGEF1-201ENST00000372189 FAM20AQ96MK3 541 aa14.3□□□□□ -0.12
RAPGEF1-201ENST00000372189 IFT122Q9HBG6 1241 aa14.3□□□□□ -0.12
RAPGEF1-201ENST00000372189 TNFAIP2Q03169 654 aa14.3□□□□□ -0.12
RAPGEF1-201ENST00000372189 NNTQ13423 1086 aa14.3□□□□□ -0.12
RAPGEF1-201ENST00000372189 CASP8Q14790 479 aa14.3□□□□□ -0.12
RAPGEF1-201ENST00000372189 ANKRD13CQ8N6S4 541 aa14.3□□□□□ -0.12
RAPGEF1-201ENST00000372189 ENOX1Q8TC92 643 aaKnown RBP14.3□□□□□ -0.12
RAPGEF1-201ENST00000372189 PIGOQ8TEQ8 1089 aa14.3□□□□□ -0.12
RAPGEF1-201ENST00000372189 HINFPQ9BQA5 517 aa14.3□□□□□ -0.12
RAPGEF1-201ENST00000372189 ARHGAP4P98171 946 aa14.29□□□□□ -0.12
RAPGEF1-201ENST00000372189 RESTQ13127 1097 aa14.29□□□□□ -0.12
RAPGEF1-201ENST00000372189 ACBD5Q5T8D3 534 aaPredicted RBP14.29□□□□□ -0.12
RAPGEF1-201ENST00000372189 ICE2Q659A1 982 aa14.29□□□□□ -0.12
RAPGEF1-201ENST00000372189 PPP1R2P3Q6NXS1 205 aa14.29□□□□□ -0.12
RAPGEF1-201ENST00000372189 PAGE5Q96GU1 130 aa14.29□□□□□ -0.12
RAPGEF1-201ENST00000372189 PARK7Q99497 189 aaKnown RBP14.29□□□□□ -0.12
RAPGEF1-201ENST00000372189 ZFYVE28Q9HCC9 887 aa14.29□□□□□ -0.12
RAPGEF1-201ENST00000372189 BFSP1Q12934 665 aa14.29□□□□□ -0.12
RAPGEF1-201ENST00000372189 TOB2Q14106 344 aaPredicted RBP14.29□□□□□ -0.12
RAPGEF1-201ENST00000372189 COG2Q14746 738 aa14.29□□□□□ -0.12
RAPGEF1-201ENST00000372189 MXD3Q9BW11 206 aa14.29□□□□□ -0.12
RAPGEF1-201ENST00000372189 KDM6AO15550 1401 aaPredicted RBP14.29□□□□□ -0.12
RAPGEF1-201ENST00000372189 COL23A1Q86Y22 540 aaPredicted RBP14.29□□□□□ -0.12
RAPGEF1-201ENST00000372189 FAM149B1Q96BN6 582 aa14.29□□□□□ -0.12
RAPGEF1-201ENST00000372189 MTRQ99707 1265 aa14.29□□□□□ -0.12
RAPGEF1-201ENST00000372189 RWDD2AQ9UIY3 292 aa14.29□□□□□ -0.12
RAPGEF1-201ENST00000372189 ZMYND10O75800 440 aa14.29□□□□□ -0.12
RAPGEF1-201ENST00000372189 HNRNPH2P55795 449 aaKnown RBP14.29□□□□□ -0.12
RAPGEF1-201ENST00000372189 CCDC144BQ3MJ40 725 aa14.29□□□□□ -0.12
RAPGEF1-201ENST00000372189 BARHL2Q9NY43 387 aa14.29□□□□□ -0.12
RAPGEF1-201ENST00000372189 SOWAHDA6NJG2 315 aa14.29□□□□□ -0.12
RAPGEF1-201ENST00000372189 IFNAR2P48551 515 aa14.29□□□□□ -0.12
RAPGEF1-201ENST00000372189 E2F5Q15329 346 aa14.29□□□□□ -0.12
RAPGEF1-201ENST00000372189 INTS5Q6P9B9 1019 aaKnown RBP14.29□□□□□ -0.12
RAPGEF1-201ENST00000372189 TMEM260Q9NX78 707 aa14.29□□□□□ -0.12
RAPGEF1-201ENST00000372189 PGRMC1O00264 195 aaKnown RBP14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 NEK9Q8TD19 979 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 PBKQ96KB5 322 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 LRRC4Q9HBW1 653 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 SERPINB6P35237 376 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 NBPF20Q3BBV1 942 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 ARMCX2Q7L311 632 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 LDHDQ86WU2 507 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 LPAR1Q92633 364 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 MTFR1LQ9H019 292 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 WDR46O15213 610 aaKnown RBP14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 UBE2TQ9NPD8 197 aaPredicted RBP14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 GOLGA8IPA6NC78 632 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 GOLGA8JA6NMD2 632 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 SPDYE16A6NNV3 312 aaPredicted RBP14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 SPDYE2Q495Y8 402 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 NAA35Q5VZE5 725 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 NXNQ6DKJ4 435 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 SWSAP1Q6NVH7 229 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 KCNV1Q6PIU1 500 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 BBS5Q8N3I7 341 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 FAM151AQ8WW52 585 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 DYDC2Q96IM9 177 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 FAM210AQ96ND0 272 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 GCNT4Q9P109 453 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 MXI1P50539 228 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 PPP2R5CQ13362 524 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 RPS6KA2Q15349 733 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 MAPK6Q16659 721 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 SARM1Q6SZW1 724 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 PPP4R3CPQ6ZMV5 832 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 SIX6OS1Q8N1H7 587 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 MAGOHBQ96A72 148 aaKnown RBP14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 HEXIM2Q96MH2 286 aaKnown RBP14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 TMEM106CQ9BVX2 250 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 ABCB6Q9NP58 842 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 TXLNGQ9NUQ3 528 aa14.28□□□□□ -0.12
RAPGEF1-201ENST00000372189 SFI1A8K8P3 1242 aa14.27□□□□□ -0.12
RAPGEF1-201ENST00000372189 ARHGEF18Q6ZSZ5 1173 aa14.27□□□□□ -0.12
RAPGEF1-201ENST00000372189 URGCPQ8TCY9 931 aa14.27□□□□□ -0.12
RAPGEF1-201ENST00000372189 MST1RQ04912 1400 aa14.27□□□□□ -0.12
RAPGEF1-201ENST00000372189 USP32Q8NFA0 1604 aa14.27□□□□□ -0.12
RAPGEF1-201ENST00000372189 SART1O43290 800 aaKnown RBP14.27□□□□□ -0.12
RAPGEF1-201ENST00000372189 ORC2Q13416 577 aaPredicted RBP14.27□□□□□ -0.12
RAPGEF1-201ENST00000372189 PRPSAP1Q14558 356 aa14.27□□□□□ -0.12
RAPGEF1-201ENST00000372189 TWF2Q6IBS0 349 aaKnown RBP14.27□□□□□ -0.12
RAPGEF1-201ENST00000372189 PADI6Q6TGC4 694 aa14.27□□□□□ -0.12
RAPGEF1-201ENST00000372189 CAPN12Q6ZSI9 719 aa14.27□□□□□ -0.12
RAPGEF1-201ENST00000372189 KLHL29Q96CT2 875 aa14.27□□□□□ -0.12
RAPGEF1-201ENST00000372189 ZNF512BQ96KM6 892 aaPredicted RBP14.27□□□□□ -0.12
RAPGEF1-201ENST00000372189 TUBB6Q9BUF5 446 aa14.27□□□□□ -0.12
RAPGEF1-201ENST00000372189 SLC38A10Q9HBR0 1119 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms