RNA–Protein interactions for RNA: ENST00000371196.6

CTCFL-202, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,491 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-202ENST00000371196 TXLNGQ9NUQ3 528 aa12.56□□□□□ -0.4
CTCFL-202ENST00000371196 MTRF1LQ9UGC7 380 aaKnown RBP12.56□□□□□ -0.4
CTCFL-202ENST00000371196 RASAL2Q9UJF2 1139 aa12.56□□□□□ -0.4
CTCFL-202ENST00000371196 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.56□□□□□ -0.4
CTCFL-202ENST00000371196 KCPQ6ZWJ8 1503 aa12.56□□□□□ -0.4
CTCFL-202ENST00000371196 RFC5P40937 340 aa12.56□□□□□ -0.4
CTCFL-202ENST00000371196 TXKP42681 527 aa12.56□□□□□ -0.4
CTCFL-202ENST00000371196 NPEPPSP55786 919 aa12.56□□□□□ -0.4
CTCFL-202ENST00000371196 RNASELQ05823 741 aaKnown RBP12.56□□□□□ -0.4
CTCFL-202ENST00000371196 TSNAXIP1Q2TAA8 658 aa12.56□□□□□ -0.4
CTCFL-202ENST00000371196 RNF43Q68DV7 783 aa12.56□□□□□ -0.4
CTCFL-202ENST00000371196 MFSD5Q6N075 450 aa12.56□□□□□ -0.4
CTCFL-202ENST00000371196 ARHGAP22Q7Z5H3 698 aa12.56□□□□□ -0.4
CTCFL-202ENST00000371196 PNMA5Q96PV4 448 aa12.56□□□□□ -0.4
CTCFL-202ENST00000371196 NUDCD1Q96RS6 583 aa12.56□□□□□ -0.4
CTCFL-202ENST00000371196 NAP1L3Q99457 506 aaPredicted RBP12.56□□□□□ -0.4
CTCFL-202ENST00000371196 VCXQ9H320 206 aa12.56□□□□□ -0.4
CTCFL-202ENST00000371196 GRHL1Q9NZI5 618 aa12.56□□□□□ -0.4
CTCFL-202ENST00000371196 ARAP2Q8WZ64 1704 aa12.55□□□□□ -0.4
CTCFL-202ENST00000371196 A0A1B0GVG6 124 aa12.55□□□□□ -0.4
CTCFL-202ENST00000371196 ADAMTS2O95450 1211 aa12.55□□□□□ -0.4
CTCFL-202ENST00000371196 HOXA7P31268 230 aaPredicted RBP12.55□□□□□ -0.4
CTCFL-202ENST00000371196 POLE2P56282 527 aa12.55□□□□□ -0.4
CTCFL-202ENST00000371196 MAPK7Q13164 816 aa12.55□□□□□ -0.4
CTCFL-202ENST00000371196 CUL3Q13618 768 aa12.55□□□□□ -0.4
CTCFL-202ENST00000371196 DCAF12L1Q5VU92 463 aa12.55□□□□□ -0.4
CTCFL-202ENST00000371196 ANKLE1Q8NAG6 615 aa12.55□□□□□ -0.4
CTCFL-202ENST00000371196 CKAP2Q8WWK9 683 aa12.55□□□□□ -0.4
CTCFL-202ENST00000371196 DNAJC9Q8WXX5 260 aa12.55□□□□□ -0.4
CTCFL-202ENST00000371196 ARHGEF2Q92974 986 aaKnown RBP12.55□□□□□ -0.4
CTCFL-202ENST00000371196 BARHL2Q9NY43 387 aa12.55□□□□□ -0.4
CTCFL-202ENST00000371196 TSPY2A6NKD2 308 aa12.55□□□□□ -0.4
CTCFL-202ENST00000371196 CREB1P16220 341 aa12.55□□□□□ -0.4
CTCFL-202ENST00000371196 PTDSS1P48651 473 aaKnown RBP12.55□□□□□ -0.4
CTCFL-202ENST00000371196 CCDC15Q0P6D6 951 aa12.55□□□□□ -0.4
CTCFL-202ENST00000371196 KCNH2Q12809 1159 aa12.55□□□□□ -0.4
CTCFL-202ENST00000371196 LONP2Q86WA8 852 aa12.55□□□□□ -0.4
CTCFL-202ENST00000371196 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.55□□□□□ -0.4
CTCFL-202ENST00000371196 ANKRD42Q8N9B4 389 aa12.55□□□□□ -0.4
CTCFL-202ENST00000371196 GDAP1Q8TB36 358 aa12.55□□□□□ -0.4
CTCFL-202ENST00000371196 ASAP3Q8TDY4 903 aa12.55□□□□□ -0.4
CTCFL-202ENST00000371196 DDX23Q9BUQ8 820 aaKnown RBP12.55□□□□□ -0.4
CTCFL-202ENST00000371196 KCNK9Q9NPC2 374 aa12.55□□□□□ -0.4
CTCFL-202ENST00000371196 DIS3Q9Y2L1 958 aaKnown RBP12.55□□□□□ -0.4
CTCFL-202ENST00000371196 RREB1Q92766 1687 aa12.55□□□□□ -0.4
CTCFL-202ENST00000371196 CASZ1Q86V15 1759 aa12.55□□□□□ -0.4
CTCFL-202ENST00000371196 UBR2Q8IWV8 1755 aa12.55□□□□□ -0.4
CTCFL-202ENST00000371196 ERVV-2B6SEH9 535 aa12.54□□□□□ -0.4
CTCFL-202ENST00000371196 UCHL3P15374 230 aa12.54□□□□□ -0.4
CTCFL-202ENST00000371196 GM2AP17900 193 aa12.54□□□□□ -0.4
CTCFL-202ENST00000371196 SLC9A1P19634 815 aa12.54□□□□□ -0.4
CTCFL-202ENST00000371196 MARSP56192 900 aaKnown RBP12.54□□□□□ -0.4
CTCFL-202ENST00000371196 NONOQ15233 471 aaKnown RBP eCLIP12.54□□□□□ -0.4
CTCFL-202ENST00000371196 CCDC152Q4G0S7 254 aa12.54□□□□□ -0.4
CTCFL-202ENST00000371196 ECHDC2Q86YB7 292 aa12.54□□□□□ -0.4
CTCFL-202ENST00000371196 ROPN1BQ9BZX4 212 aaPredicted RBP12.54□□□□□ -0.4
CTCFL-202ENST00000371196 ROPN1Q9HAT0 212 aaPredicted RBP12.54□□□□□ -0.4
CTCFL-202ENST00000371196 RTCBQ9Y3I0 505 aaKnown RBP12.54□□□□□ -0.4
CTCFL-202ENST00000371196 DDX3YO15523 660 aaKnown RBP12.54□□□□□ -0.4
CTCFL-202ENST00000371196 BAG3O95817 575 aa12.54□□□□□ -0.4
CTCFL-202ENST00000371196 KRT13P13646 458 aa12.54□□□□□ -0.4
CTCFL-202ENST00000371196 VSTM1Q6UX27 236 aa12.54□□□□□ -0.4
CTCFL-202ENST00000371196 NEK8Q86SG6 692 aa12.54□□□□□ -0.4
CTCFL-202ENST00000371196 VPS36Q86VN1 386 aa12.54□□□□□ -0.4
CTCFL-202ENST00000371196 AGGF1Q8N302 714 aaeCLIP12.54□□□□□ -0.4
CTCFL-202ENST00000371196 FAM13CQ8NE31 585 aa12.54□□□□□ -0.4
CTCFL-202ENST00000371196 RAD54LQ92698 747 aa12.54□□□□□ -0.4
CTCFL-202ENST00000371196 KIFAP3Q92845 792 aa12.54□□□□□ -0.4
CTCFL-202ENST00000371196 TGS1Q96RS0 853 aaKnown RBP12.54□□□□□ -0.4
CTCFL-202ENST00000371196 LRMDAQ9H2I8 198 aa12.54□□□□□ -0.4
CTCFL-202ENST00000371196 PPP1R9AQ9ULJ8 1098 aa12.54□□□□□ -0.4
CTCFL-202ENST00000371196 PCDH11XQ9BZA7 1347 aa12.54□□□□□ -0.4
CTCFL-202ENST00000371196 ATP5HO75947 161 aa12.54□□□□□ -0.4
CTCFL-202ENST00000371196 AFPP02771 609 aaKnown RBP12.54□□□□□ -0.4
CTCFL-202ENST00000371196 RARGP13631 454 aa12.54□□□□□ -0.4
CTCFL-202ENST00000371196 RPL21P46778 160 aaKnown RBP12.54□□□□□ -0.4
CTCFL-202ENST00000371196 LONRF1Q17RB8 773 aa12.54□□□□□ -0.4
CTCFL-202ENST00000371196 CGB2Q6NT52 195 aa12.54□□□□□ -0.4
CTCFL-202ENST00000371196 KRT25Q7Z3Z0 450 aa12.54□□□□□ -0.4
CTCFL-202ENST00000371196 VSIG1Q86XK7 387 aa12.54□□□□□ -0.4
CTCFL-202ENST00000371196 ENDOVQ8N8Q3 282 aaKnown RBP12.54□□□□□ -0.4
CTCFL-202ENST00000371196 OSGEPQ9NPF4 335 aa12.54□□□□□ -0.4
CTCFL-202ENST00000371196 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.54□□□□□ -0.4
CTCFL-202ENST00000371196 CTNNAL1Q9UBT7 734 aa12.54□□□□□ -0.4
CTCFL-202ENST00000371196 INTUQ9ULD6 942 aa12.54□□□□□ -0.4
CTCFL-202ENST00000371196 NENFQ9UMX5 172 aa12.54□□□□□ -0.4
CTCFL-202ENST00000371196 ZBTB12Q9Y330 459 aaPredicted RBP12.54□□□□□ -0.4
CTCFL-202ENST00000371196 H0Y3Z8 333 aa12.53□□□□□ -0.4
CTCFL-202ENST00000371196 PRKCIP41743 596 aa12.53□□□□□ -0.4
CTCFL-202ENST00000371196 RANBP1P43487 201 aa12.53□□□□□ -0.4
CTCFL-202ENST00000371196 COASYQ13057 564 aa12.53□□□□□ -0.4
CTCFL-202ENST00000371196 MKRN3Q13064 507 aaKnown RBP12.53□□□□□ -0.4
CTCFL-202ENST00000371196 OR52E8Q6IFG1 317 aa12.53□□□□□ -0.4
CTCFL-202ENST00000371196 NELFCDQ8IXH7 590 aa12.53□□□□□ -0.4
CTCFL-202ENST00000371196 RBBP8NLQ8NC74 664 aaPredicted RBP12.53□□□□□ -0.4
CTCFL-202ENST00000371196 RBM46Q8TBY0 533 aaKnown RBP12.53□□□□□ -0.4
CTCFL-202ENST00000371196 BICD1Q96G01 975 aa12.53□□□□□ -0.4
CTCFL-202ENST00000371196 RBM41Q96IZ5 413 aaKnown RBP12.53□□□□□ -0.4
CTCFL-202ENST00000371196 LRRC27Q9C0I9 530 aa12.53□□□□□ -0.4
CTCFL-202ENST00000371196 CARD9Q9H257 536 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms