RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 PLXNB2O15031 1838 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 DOCK1Q14185 1865 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 DNM1LO00429 736 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 PER1O15534 1290 aaPredicted RBP5.54□□□□□ -1.52
UBE3D-202ENST00000369746 ADCY3O60266 1144 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 GUCA1CO95843 209 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 PENKP01210 267 aaPredicted RBP5.54□□□□□ -1.52
UBE3D-202ENST00000369746 EZRP15311 586 aaKnown RBP5.54□□□□□ -1.52
UBE3D-202ENST00000369746 PRLRP16471 622 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 TRIM21P19474 475 aaKnown RBP5.54□□□□□ -1.52
UBE3D-202ENST00000369746 SDHBP21912 280 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 MTHFRP42898 656 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 CTAG1AP78358 180 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 NKX3-2P78367 333 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 AKAP17AQ02040 695 aaKnown RBP5.54□□□□□ -1.52
UBE3D-202ENST00000369746 DYNC1I2Q13409 638 aaKnown RBP5.54□□□□□ -1.52
UBE3D-202ENST00000369746 SEMA3AQ14563 771 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 MFSD10Q14728 455 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 RCN1Q15293 331 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 CCDC152Q4G0S7 254 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 ANKRD39Q53RE8 183 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 SPDYCQ5MJ68 293 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 SLC30A9Q6PML9 568 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 TTLL7Q6ZT98 887 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 SEPT14Q6ZU15 432 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 TMC7Q7Z402 723 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 TPH2Q8IWU9 490 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 RTF1Q92541 710 aaKnown RBP5.54□□□□□ -1.52
UBE3D-202ENST00000369746 SGCDQ92629 289 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 OPTNQ96CV9 577 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 MMADHCQ9H3L0 296 aaPredicted RBP5.54□□□□□ -1.52
UBE3D-202ENST00000369746 SERTM1A2A2V5 107 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 ENO4A6NNW6 628 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 EFCAB8A8MWE9 144 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 TMEM232C9JQI7 657 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 J3KRW8 73 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 TREHO43280 583 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 SART1O43290 800 aaKnown RBP5.54□□□□□ -1.52
UBE3D-202ENST00000369746 CEP104O60308 925 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 TMCC2O75069 709 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 EPN2O95208 641 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 CAVIN2O95810 425 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 BMP1P13497 986 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 KRT13P13646 458 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 MUTP22033 750 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 GRK2P25098 689 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 PBLDP30039 288 aaPredicted RBP5.54□□□□□ -1.52
UBE3D-202ENST00000369746 GJA5P36382 358 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 CLNS1AP54105 237 aaKnown RBP5.54□□□□□ -1.52
UBE3D-202ENST00000369746 ADCY1Q08828 1119 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 IFFO1Q0D2I5 559 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 LRRC23Q53EV4 343 aaPredicted RBP5.54□□□□□ -1.52
UBE3D-202ENST00000369746 CCDC183Q5T5S1 534 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 COLGALT2Q8IYK4 626 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 PLBD2Q8NHP8 589 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 EPS8L3Q8TE67 593 aaKnown RBP5.54□□□□□ -1.52
UBE3D-202ENST00000369746 KAT2BQ92831 832 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 KIFC2Q96AC6 838 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 TMX3Q96JJ7 454 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 MFSD14AQ96MC6 490 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 JPH2Q9BR39 696 aaPredicted RBP5.54□□□□□ -1.52
UBE3D-202ENST00000369746 HERPUD2Q9BSE4 406 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 ZNF341Q9BYN7 854 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 TRIM8Q9BZR9 551 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 SLC13A1Q9BZW2 595 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 DEFB129Q9H1M3 183 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 MTIF3Q9H2K0 278 aaKnown RBP5.54□□□□□ -1.52
UBE3D-202ENST00000369746 EMILIN3Q9NT22 766 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 SEPT10Q9P0V9 454 aa5.54□□□□□ -1.52
UBE3D-202ENST00000369746 ORC3Q9UBD5 711 aaPredicted RBP5.54□□□□□ -1.52
UBE3D-202ENST00000369746 TTLL13PA6NNM8 815 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 SRGAP3O43295 1099 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 LZTS3O60299 673 aaPredicted RBP5.53□□□□□ -1.52
UBE3D-202ENST00000369746 CYP17A1P05093 508 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 INHAP05111 366 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 ZFXP17010 805 aaPredicted RBP5.53□□□□□ -1.52
UBE3D-202ENST00000369746 HADHAP40939 763 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 PSMC4P43686 418 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 SMTNP53814 917 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 SLC39A6Q13433 755 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 MOGSQ13724 837 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 WSCD2Q2TBF2 565 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 MZT2BQ6NZ67 158 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 BEND5Q7L4P6 421 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 ZER1Q7Z7L7 766 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 GPR161Q8N6U8 529 aaKnown RBP5.53□□□□□ -1.52
UBE3D-202ENST00000369746 FAM71BQ8TC56 605 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 THAP11Q96EK4 314 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 CNDP1Q96KN2 507 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 TSEN34Q9BSV6 310 aaKnown RBP5.53□□□□□ -1.52
UBE3D-202ENST00000369746 MOV10L1Q9BXT6 1211 aaKnown RBP5.53□□□□□ -1.52
UBE3D-202ENST00000369746 PHACTR1Q9C0D0 580 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 SEMA4AQ9H3S1 761 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 TCF7L2Q9NQB0 619 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 DKK3Q9UBP4 350 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 SEPT3Q9UH03 358 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 GAKO14976 1311 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 SRCAPQ6ZRS2 3230 aa5.53□□□□□ -1.52
UBE3D-202ENST00000369746 WTIPA6NIX2 430 aaPredicted RBP5.53□□□□□ -1.52
UBE3D-202ENST00000369746 NCAM2O15394 837 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms