RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 MAPK6Q16659 721 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 ZNF746Q6NUN9 644 aaPredicted RBP5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 NYAP1Q6ZVC0 841 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 EEPD1Q7L9B9 569 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 C2orf69Q8N8R5 385 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 PPM1EQ8WY54 764 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 PARD6BQ9BYG5 372 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 C17orf75Q9HAS0 396 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 PLCB1Q9NQ66 1216 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 KCNQ5Q9NR82 932 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 RAB20Q9NX57 234 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 AKT3Q9Y243 479 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 USTQ9Y2C2 406 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 NPHP3-ACAD11A0A0J9YXS1 232 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 MIF4GDA9UHW6 222 aaKnown RBP5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 CCDC188H7C350 402 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 WNT10BO00744 389 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 CLDN3O15551 220 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 THAP12O43422 761 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 AP3M2P53677 418 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 EPHB4P54760 987 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 IGBP1P78318 339 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 NIPA1Q7RTP0 329 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 TNFRSF25Q93038 417 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 MTMR9Q96QG7 549 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 MOV10L1Q9BXT6 1211 aaKnown RBP5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 INTS2Q9H0H0 1204 aaKnown RBP5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 AP5M1Q9H0R1 490 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 FBXO28Q9NVF7 368 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 RRP15Q9Y3B9 282 aaKnown RBP5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 MRFAP1Q9Y605 127 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 PLIN4Q96Q06 1357 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 TLDC2A0PJX2 215 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 KLRG2A4D1S0 409 aaPredicted RBP5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 GOLGA8IPA6NC78 632 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 GOLGA8JA6NMD2 632 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 P4HA2O15460 535 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 MED7O43513 233 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 MED24O75448 989 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 CYP3A4P08684 503 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 SNHG28P0DPA3 235 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 CALRP27797 417 aaKnown RBP5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 GCLMP48507 274 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 MESDQ14696 234 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 NBPF9Q3BBW0 867 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 TMEM119Q4V9L6 283 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 RINT1Q6NUQ1 792 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 TATDN1Q6P1N9 297 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 BBOF1Q8ND07 529 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 ATG4CQ96DT6 458 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 MMP19Q99542 508 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 TRIM31Q9BZY9 425 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 ZCCHC17Q9NP64 241 aaKnown RBP5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 FAM114A2Q9NRY5 505 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 HESX1Q9UBX0 185 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 MKRN1Q9UHC7 482 aaKnown RBP5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 LCMT1Q9UIC8 334 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 DUOX1Q9NRD9 1551 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 A0A087X0B3 334 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 FTCDO95954 541 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 MAPK4P31152 587 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 GYS2P54840 703 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 TNFAIP2Q03169 654 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 LMNB2Q03252 620 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 MTF1Q14872 753 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 DRAP1Q14919 205 aaPredicted RBP5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 PCNX4Q63HM2 1172 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 ZFPM1Q8IX07 1006 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 ANKRD13AQ8IZ07 590 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 FAM71BQ8TC56 605 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 ATRIPQ8WXE1 791 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 POLR3FQ9H1D9 316 aaPredicted RBP5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 RABEP2Q9H5N1 569 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 GOLGA8KD6RF30 607 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 PIK3CDO00329 1044 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 TBXAS1P24557 533 aaPredicted RBP5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 SOX5P35711 763 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 PHKA2P46019 1235 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 OAZ1P54368 228 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 TFAMQ00059 246 aaKnown RBP5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 CDK17Q00537 523 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 GUCY2DQ02846 1103 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 GFPT1Q06210 699 aaPredicted RBP5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 KIF22Q14807 665 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 SLC18A3Q16572 532 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 BTNL9Q6UXG8 535 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 RAD9BQ6WBX8 426 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 RSPH3Q86UC2 560 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 GPD1LQ8N335 351 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 DNAJC7Q99615 494 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 CHP1Q99653 195 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 STK33Q9BYT3 514 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 IQCGQ9H095 443 aaKnown RBP5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 RPF1Q9H9Y2 349 aaKnown RBP5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 HOMER3Q9NSC5 361 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 AGPAT5Q9NUQ2 364 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 PLAGL2Q9UPG8 496 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 PASKQ96RG2 1323 aa5.74□□□□□ -1.49
SMNDC1-202ENST00000369603 CYP3A7-CYP3A51PA0A087WV96 503 aa5.73□□□□□ -1.49
SMNDC1-202ENST00000369603 LRRC10BA6NIK2 292 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms